; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc02g0053231 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0053231
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionVIN3-like protein 2
Genome locationCMiso1.1chr02:20643248..20646093
RNA-Seq ExpressionCmc02g0053231
SyntenyCmc02g0053231
Gene Ontology termsGO:0010048 - vernalization response (biological process)
GO:0040029 - regulation of gene expression, epigenetic (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR032881 - Oberon, PHD finger domain
IPR044514 - Vernalization insensitive 3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK11821.1 VIN3-like protein 2 [Cucumis melo var. makuwa]1.3e-125100Show/hide
Query:  GAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPCPSPKISK
        GAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPCPSPKISK
Subjt:  GAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPCPSPKISK

Query:  RQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALKHEKSGI
        RQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALKHEKSGI
Subjt:  RQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALKHEKSGI

Query:  SRGQQTGIEGTFCCVSCGKVNDLIG
        SRGQQTGIEGTFCCVSCGKVNDLIG
Subjt:  SRGQQTGIEGTFCCVSCGKVNDLIG

XP_008453597.1 PREDICTED: VIN3-like protein 2 [Cucumis melo]1.5e-129100Show/hide
Query:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP
        MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP
Subjt:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP

Query:  CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA
        CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA
Subjt:  CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA

Query:  LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG
        LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG
Subjt:  LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG

XP_011656859.1 VIN3-like protein 2 [Cucumis sativus]1.7e-12596.57Show/hide
Query:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP
        MPSDS SEGAALEPL+SSMMS+EKKRNLVYEISDQPHA ELLQSWSR EILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLD+QSSP
Subjt:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP

Query:  CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA
        CPSP ISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKAN+NQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA
Subjt:  CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA

Query:  LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG
        LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG
Subjt:  LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG

XP_022921662.1 VIN3-like protein 2 [Cucurbita moschata]8.1e-11286.7Show/hide
Query:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP
        M SDSSSEG A +P R S MSME+KRNLVYEISDQP+AS+LLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIV +KKSGS+EDVTDLDSQSSP
Subjt:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP

Query:  CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA
        C  PKI+KRQRKIDQPARLPVP N+ PISNTR+DSNIAVYCRNSACKA LNQ+D+FCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQ TSC MSCHLECA
Subjt:  CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA

Query:  LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG
        LKHEKSGISRG + G+EGTFCC+SCGKVNDL+G
Subjt:  LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG

XP_023516105.1 VIN3-like protein 2 [Cucurbita pepo subsp. pepo]1.8e-11186.27Show/hide
Query:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP
        M SDSSSEG A +P R S MSME+KRNLVYEISDQP+AS+LLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIV +KKSGS+EDVTDLDSQSSP
Subjt:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP

Query:  CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA
        C  PKI+KRQRK+DQPARLPVP N+ PIS+TR+DSNIAVYCRNSACKA LNQ+D+FCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQ TSC MSCHLECA
Subjt:  CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA

Query:  LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG
        LKHEKSGISRG + GIEGTFCC+SCGKVNDL+G
Subjt:  LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG

TrEMBL top hitse value%identityAlignment
A0A0A0LUM5 PHD_Oberon domain-containing protein8.2e-12696.57Show/hide
Query:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP
        MPSDS SEGAALEPL+SSMMS+EKKRNLVYEISDQPHA ELLQSWSR EILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLD+QSSP
Subjt:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP

Query:  CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA
        CPSP ISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKAN+NQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA
Subjt:  CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA

Query:  LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG
        LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG
Subjt:  LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG

A0A1S3BWQ7 VIN3-like protein 27.1e-130100Show/hide
Query:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP
        MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP
Subjt:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP

Query:  CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA
        CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA
Subjt:  CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA

Query:  LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG
        LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG
Subjt:  LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG

A0A5A7USY4 VIN3-like protein 27.1e-130100Show/hide
Query:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP
        MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP
Subjt:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP

Query:  CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA
        CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA
Subjt:  CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA

Query:  LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG
        LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG
Subjt:  LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG

A0A5D3CJ42 VIN3-like protein 26.3e-126100Show/hide
Query:  GAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPCPSPKISK
        GAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPCPSPKISK
Subjt:  GAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPCPSPKISK

Query:  RQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALKHEKSGI
        RQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALKHEKSGI
Subjt:  RQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALKHEKSGI

Query:  SRGQQTGIEGTFCCVSCGKVNDLIG
        SRGQQTGIEGTFCCVSCGKVNDLIG
Subjt:  SRGQQTGIEGTFCCVSCGKVNDLIG

A0A6J1E144 VIN3-like protein 23.9e-11286.7Show/hide
Query:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP
        M SDSSSEG A +P R S MSME+KRNLVYEISDQP+AS+LLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIV +KKSGS+EDVTDLDSQSSP
Subjt:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSP

Query:  CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA
        C  PKI+KRQRKIDQPARLPVP N+ PISNTR+DSNIAVYCRNSACKA LNQ+D+FCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQ TSC MSCHLECA
Subjt:  CPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECA

Query:  LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG
        LKHEKSGISRG + G+EGTFCC+SCGKVNDL+G
Subjt:  LKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG

SwissProt top hitse value%identityAlignment
Q5BPT4 VIN3-like protein 36.0e-4143.72Show/hide
Query:  SSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHA--SELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPCP
        S  +GAA + + SS MS +++R LV ++S +      E+L+ WS +EI E+L AE  K+ KYTGLTK +II  L  IV KK +   E V ++       P
Subjt:  SSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHA--SELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPCP

Query:  SPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALK
        SPK  KR         L  P+        +      +YC+N AC+  L ++  FCKRCSCCIC++YDDNKDPSLWL+C+SD  F   SC +SCHL CA  
Subjt:  SPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALK

Query:  HEKSGISRG-QQTGIEGTFCCVSCGKVNDLI
         EKSG+      + I+G F CVSCGK N  I
Subjt:  HEKSGISRG-QQTGIEGTFCCVSCGKVNDLI

Q9FIE3 Protein VERNALIZATION INSENSITIVE 31.0e-4040.17Show/hide
Query:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQP-HASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSS
        M S S  +   +E  + +++++ ++R L++ +S+QP  ASELL SWSR+EI++I+CAEMGKERKYTGL K K+IENLL +V +                +
Subjt:  MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQP-HASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSS

Query:  PCPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLEC
         C   + S+++ K                          + C N AC+A L  DD FC+RCSCCIC ++DDNKDPSLWL+C         +C  SCHLEC
Subjt:  PCPSPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLEC

Query:  ALKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG
         LK ++ GI       ++G F C  CGK NDL+G
Subjt:  ALKHEKSGISRGQQTGIEGTFCCVSCGKVNDLIG

Q9LHF5 VIN3-like protein 11.3e-2448.94Show/hide
Query:  CRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALKHEKSG-ISRGQQTGIEGTFCCVSCGKVNDLIG
        C+N++C+AN+ ++D FCKRCSCC+C+ +D+NKDPSLWL C  +       C +SCH+ECA +  K G I+ G    ++G FCC SCGKV+ ++G
Subjt:  CRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALKHEKSG-ISRGQQTGIEGTFCCVSCGKVNDLIG

Q9SUM4 VIN3-like protein 29.1e-6656.02Show/hide
Query:  DSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPH-ASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPC-
        DSS +GAA +  + S MS+++KR LVYE+S Q H A+E+LQ+WSR EIL+ILCAEMGKERKYTGLTK+KIIE LLKIV +K SG  E       + S C 
Subjt:  DSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPH-ASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPC-

Query:  PSPKISKRQRKIDQPARLPVPVNNSPISNTRTDS---------NIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCR
        P  + +KRQRK+D P+R  +P  N   SN  + S         +  +YC+N AC+A L Q+D FC+RCSCCIC +YDDNKDPSLWL+CSSDPPF+  SC 
Subjt:  PSPKISKRQRKIDQPARLPVPVNNSPISNTRTDS---------NIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCR

Query:  MSCHLECALKHEKSGISRGQQTGIEG-TFCCVSCGKVNDLI
         SCHLECA   EKSG+ + +Q+  EG  F CVSCGK N L+
Subjt:  MSCHLECALKHEKSGISRGQQTGIEG-TFCCVSCGKVNDLI

Arabidopsis top hitse value%identityAlignment
AT2G18880.1 vernalization5/VIN3-like4.2e-4243.72Show/hide
Query:  SSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHA--SELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPCP
        S  +GAA + + SS MS +++R LV ++S +      E+L+ WS +EI E+L AE  K+ KYTGLTK +II  L  IV KK +   E V ++       P
Subjt:  SSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHA--SELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPCP

Query:  SPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALK
        SPK  KR         L  P+        +      +YC+N AC+  L ++  FCKRCSCCIC++YDDNKDPSLWL+C+SD  F   SC +SCHL CA  
Subjt:  SPKISKRQRKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALK

Query:  HEKSGISRG-QQTGIEGTFCCVSCGKVNDLI
         EKSG+      + I+G F CVSCGK N  I
Subjt:  HEKSGISRG-QQTGIEGTFCCVSCGKVNDLI

AT4G30200.1 vernalization5/VIN3-like1.8e-6456.89Show/hide
Query:  MSMEKKRNLVYEISDQPH-ASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPC-PSPKISKRQRKIDQPA
        MS+++KR LVYE+S Q H A+E+LQ+WSR EIL+ILCAEMGKERKYTGLTK+KIIE LLKIV +K SG  E       + S C P  + +KRQRK+D P+
Subjt:  MSMEKKRNLVYEISDQPH-ASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPC-PSPKISKRQRKIDQPA

Query:  RLPVPVNNSPISNTRTDS---------NIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALKHEKSGI
        R  +P  N   SN  + S         +  +YC+N AC+A L Q+D FC+RCSCCIC +YDDNKDPSLWL+CSSDPPF+  SC  SCHLECA   EKSG+
Subjt:  RLPVPVNNSPISNTRTDS---------NIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALKHEKSGI

Query:  SRGQQTGIEG-TFCCVSCGKVNDLI
         + +Q+  EG  F CVSCGK N L+
Subjt:  SRGQQTGIEG-TFCCVSCGKVNDLI

AT4G30200.2 vernalization5/VIN3-like6.5e-6756.02Show/hide
Query:  DSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPH-ASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPC-
        DSS +GAA +  + S MS+++KR LVYE+S Q H A+E+LQ+WSR EIL+ILCAEMGKERKYTGLTK+KIIE LLKIV +K SG  E       + S C 
Subjt:  DSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPH-ASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPC-

Query:  PSPKISKRQRKIDQPARLPVPVNNSPISNTRTDS---------NIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCR
        P  + +KRQRK+D P+R  +P  N   SN  + S         +  +YC+N AC+A L Q+D FC+RCSCCIC +YDDNKDPSLWL+CSSDPPF+  SC 
Subjt:  PSPKISKRQRKIDQPARLPVPVNNSPISNTRTDS---------NIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCR

Query:  MSCHLECALKHEKSGISRGQQTGIEG-TFCCVSCGKVNDLI
         SCHLECA   EKSG+ + +Q+  EG  F CVSCGK N L+
Subjt:  MSCHLECALKHEKSGISRGQQTGIEG-TFCCVSCGKVNDLI

AT4G30200.3 vernalization5/VIN3-like6.5e-6756.02Show/hide
Query:  DSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPH-ASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPC-
        DSS +GAA +  + S MS+++KR LVYE+S Q H A+E+LQ+WSR EIL+ILCAEMGKERKYTGLTK+KIIE LLKIV +K SG  E       + S C 
Subjt:  DSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPH-ASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPC-

Query:  PSPKISKRQRKIDQPARLPVPVNNSPISNTRTDS---------NIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCR
        P  + +KRQRK+D P+R  +P  N   SN  + S         +  +YC+N AC+A L Q+D FC+RCSCCIC +YDDNKDPSLWL+CSSDPPF+  SC 
Subjt:  PSPKISKRQRKIDQPARLPVPVNNSPISNTRTDS---------NIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCR

Query:  MSCHLECALKHEKSGISRGQQTGIEG-TFCCVSCGKVNDLI
         SCHLECA   EKSG+ + +Q+  EG  F CVSCGK N L+
Subjt:  MSCHLECALKHEKSGISRGQQTGIEG-TFCCVSCGKVNDLI

AT4G30200.4 vernalization5/VIN3-like6.5e-6756.02Show/hide
Query:  DSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPH-ASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPC-
        DSS +GAA +  + S MS+++KR LVYE+S Q H A+E+LQ+WSR EIL+ILCAEMGKERKYTGLTK+KIIE LLKIV +K SG  E       + S C 
Subjt:  DSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPH-ASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPC-

Query:  PSPKISKRQRKIDQPARLPVPVNNSPISNTRTDS---------NIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCR
        P  + +KRQRK+D P+R  +P  N   SN  + S         +  +YC+N AC+A L Q+D FC+RCSCCIC +YDDNKDPSLWL+CSSDPPF+  SC 
Subjt:  PSPKISKRQRKIDQPARLPVPVNNSPISNTRTDS---------NIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCR

Query:  MSCHLECALKHEKSGISRGQQTGIEG-TFCCVSCGKVNDLI
         SCHLECA   EKSG+ + +Q+  EG  F CVSCGK N L+
Subjt:  MSCHLECALKHEKSGISRGQQTGIEG-TFCCVSCGKVNDLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCCGATTCTTCATCTGAAGGAGCTGCTCTCGAACCATTAAGATCTAGTATGATGAGTATGGAGAAGAAAAGGAATTTGGTCTATGAAATATCAGATCAGCCACA
TGCATCTGAATTGCTTCAGTCCTGGAGTCGACACGAGATTTTAGAAATCTTGTGTGCAGAGATGGGAAAAGAGAGGAAATATACTGGATTAACAAAACTAAAAATAATTG
AGAACCTTCTGAAAATTGTTGGTAAAAAGAAATCAGGGTCAACTGAGGATGTAACAGACCTCGACAGTCAGTCTTCTCCTTGTCCTTCTCCAAAGATTTCCAAACGGCAA
AGAAAAATTGATCAGCCAGCACGGCTGCCTGTTCCTGTAAACAATAGTCCAATCAGTAACACTAGGACTGACTCAAATATTGCAGTGTACTGCAGAAATTCGGCGTGCAA
AGCTAACTTAAATCAAGATGATAAATTTTGCAAGAGGTGTTCATGCTGCATCTGTTATCAATATGATGATAATAAGGATCCTAGTCTGTGGTTAAGTTGCAGCTCTGACC
CACCATTTCAAAGCACTTCATGTCGTATGTCATGCCATCTTGAATGTGCACTGAAGCATGAAAAATCTGGGATTTCTAGAGGACAGCAGACCGGAATTGAAGGGACCTTC
TGTTGTGTATCTTGTGGAAAAGTCAATGACTTGATTGGGTAA
mRNA sequenceShow/hide mRNA sequence
CACAAGGGAAGGAAGGGACAAATCATGCAGCCGCATTTGTAATGGTTTGAGCTAAGAGAAAAAAGAGAGACAGAAAGAGAGAGAGAGAGAGCGGCTAATAGTATTCTTCA
TTCATTCATTCATTCATTCGATTTGATTTGATTTGATTTTTGATCGAATCACACAGACTCTTCTCTCTAAGCCTCTAACGAAAAACACAAAGATTCCATCATCATCATCC
CTCCTCTTTAAATTTCTCAATCACAATCTCAATCTCAATCTCAATATCTCAATCCCATGGATTCCTCCTTCTTCCTCCCGTTCTTTCCCGCTGTAATTTATTGGTCCTTA
TTTGTTCCTTTTTCCTGCTAATGTCGTCGATTCGCTATGCCTTCCGATTCTTCATCTGAAGGAGCTGCTCTCGAACCATTAAGATCTAGTATGATGAGTATGGAGAAGAA
AAGGAATTTGGTCTATGAAATATCAGATCAGCCACATGCATCTGAATTGCTTCAGTCCTGGAGTCGACACGAGATTTTAGAAATCTTGTGTGCAGAGATGGGAAAAGAGA
GGAAATATACTGGATTAACAAAACTAAAAATAATTGAGAACCTTCTGAAAATTGTTGGTAAAAAGAAATCAGGGTCAACTGAGGATGTAACAGACCTCGACAGTCAGTCT
TCTCCTTGTCCTTCTCCAAAGATTTCCAAACGGCAAAGAAAAATTGATCAGCCAGCACGGCTGCCTGTTCCTGTAAACAATAGTCCAATCAGTAACACTAGGACTGACTC
AAATATTGCAGTGTACTGCAGAAATTCGGCGTGCAAAGCTAACTTAAATCAAGATGATAAATTTTGCAAGAGGTGTTCATGCTGCATCTGTTATCAATATGATGATAATA
AGGATCCTAGTCTGTGGTTAAGTTGCAGCTCTGACCCACCATTTCAAAGCACTTCATGTCGTATGTCATGCCATCTTGAATGTGCACTGAAGCATGAAAAATCTGGGATT
TCTAGAGGACAGCAGACCGGAATTGAAGGGACCTTCTGTTGTGTATCTTGTGGAAAAGTCAATGACTTGATTGGGTAATTACTCCGACTTTTATATCTGGTTCATTGAAT
TTGAAAGGATTTCGAAAGGTTTGTTTCGTCTTCATTTTTAATTTCTTGATTTTTTTTCTTTGAAAACATCAATCGATTTTTATTGAGGTGAATCTAGTAAAGTAATTTGC
ATTGTCACTGCCTCGGTTGCTATTCATTTTCATTCATCCTAAGGCCGTGAATCTGCAAACCTTCTGGAGTAGTAAAGTTTGTAAAGTTTTTTCTTTTCTAATTATTTGGA
CCTGAGACGTGTGGTTCTCTTTATCTTGAAAAATGAAGCTGCTGATTGTTGCTTCGTTTCTCTTACTGTCGAAGATTCAAGTTAAGAATTTAATTACGTTTTGTTGTCCA
TAATGTATTAGAAGTTGACTAAGTTTAGGACATTATTCCTACATACTTGCAATCTCACTGAGTTAATATCTAATGTCAATCACGATAATTTTTTAAACATTTAGTGTCTT
TTACTCATTTTGGGGAACCGGTATTTGATCGCACACCAATTGATATAAAAAGTCCCCTCCTCAAAGACCGGCCAGTCCAAATCAAATGGAGATTGCTAAAAGAGATCAAT
AATTGGACCGAATTAAAAAGAAGAAAAGAAATAAATTTTTTAAAGGTTGCAAAATTTTGGAGTTAGAAAATAGCTAGGATGCTGTATGTCT
Protein sequenceShow/hide protein sequence
MPSDSSSEGAALEPLRSSMMSMEKKRNLVYEISDQPHASELLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPCPSPKISKRQ
RKIDQPARLPVPVNNSPISNTRTDSNIAVYCRNSACKANLNQDDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALKHEKSGISRGQQTGIEGTF
CCVSCGKVNDLIG