| GenBank top hits | e value | %identity | Alignment |
|---|
| AAO73521.1 gag-pol polyprotein [Glycine max] | 7.4e-205 | 57.8 | Show/hide |
Query: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
M+HAK LP + WA +NTACYIHNR+T R GT TLYE+WKGRKP+VK+FH FGS CYILADRE RK K + G+FLGYS N+RAYRVFN+RT TVME
Subjt: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
Query: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTS--TSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDY
+INV+V+D K+ D EED V TS D +K+ N D S + E+ + S+ +K H IIGDP G+T+R ++
Subjt: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTS--TSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDY
Query: SKMIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVA
+++++ C+ IE + + AL DE+WINAMQEEL FKRN VW LVP+P+ N+IGTKWIFKNK +E G +TRNKARLVAQGY QIEGVDFDETFAPVA
Subjt: SKMIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVA
Query: RLEAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSS
RLE+I LLLG++CI KFK YQMDVK AFLNGYLNEE+YV QPKGF D P HVY++ KALY LKQAP+AWYE LT +L + Y +GG DKTLF+ + +
Subjt: RLEAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSS
Query: DLIVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDH
+L++AQIYVDDI+F G ++ F+ ++SEFEMS+ YAKNIVKKFG++ + HKRTPA T++K++KD G +VD
Subjt: DLIVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDH
Query: KLYRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWF
LYRSMIGSLLYLTASR DI YA+ +CAR+ +P+ SHLT +KRI+KYV+GT+D+ I+Y + + +LV YCDADWAGS +DRKSTS GCF+LGNNLISWF
Subjt: KLYRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWF
Query: SKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
SKKQNCVSLSTAEAEYIAAGS C+QL+WMK M +
Subjt: SKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
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| AAO73523.1 gag-pol polyprotein [Glycine max] | 9.6e-205 | 57.8 | Show/hide |
Query: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
M+HAK LP + WA +NTACYIHNR+T R GT TLYE+WKGRKP+VK+FH FGS CYILADRE RK K + G+FLGYS N+RAYRVFN+RT TVME
Subjt: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
Query: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTS--TSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDY
+INV+V+D K+ D EED V TS D +K+ N D S + E+ + S+ +K H IIGDP G+T+R ++
Subjt: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTS--TSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDY
Query: SKMIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVA
+++++ C+ IE + + AL DE+WINAMQEEL FKRN VW LVP+P+ N+IGTKWIFKNK +E G +TRNKARLVAQGY QIEGVDFDETFAPVA
Subjt: SKMIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVA
Query: RLEAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSS
RLE+I LLLG++CI KFK YQMDVK AFLNGYLNEE+YV QPKGF D P HVY++ KALY LKQAP+AWYE LT +L + Y +GG DKTLF+ + +
Subjt: RLEAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSS
Query: DLIVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDH
+L++AQIYVDDI+F G ++ F+ ++SEFEMS+ YAKNIVKKFG++ + HKRTPA T++K++KD G +VD
Subjt: DLIVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDH
Query: KLYRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWF
K YRSMIGSLLYLTASR DI YA+ +CAR+ +P+ SHL +KRI+KYV+GT+D+ I+Y + ++S+LV YCDADWAGS +DRKSTS GCF+LGNNLISWF
Subjt: KLYRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWF
Query: SKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
SKKQNCVSLSTAEAEYIAAGS C+QL+WMK M +
Subjt: SKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
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| AAO73527.1 gag-pol polyprotein [Glycine max] | 1.6e-204 | 57.5 | Show/hide |
Query: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
M+HAK LP + WA +NTACYIHNR+T R GT TLYE+WKGRKP+VK+FH FGS CYILADRE RK K + G+FLGYS N+RAYRVFN+RT TVME
Subjt: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
Query: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTSTSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDYSK
+INV+V+D K+ D EED D +K+ N D S + E+ + S+ +K H IIGDP G+T+R ++ +
Subjt: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTSTSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDYSK
Query: MIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVARL
++++ C+ IE + + AL DE+WINAMQEEL FKRN VW LVP+P+ N+IGTKWIFKNK +E G +TRNKARLVAQGY QIEGVDFDETFAPVARL
Subjt: MIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVARL
Query: EAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSSDL
E+I LLLG++CI KFK YQMDVK AFLNGYLNEE+YV QPKGF D P HVY++ KALY LKQAP+AWYE LT +L + Y +GG DKTLF+ + + +L
Subjt: EAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSSDL
Query: IVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDHKL
++AQIYVDDI+F G ++ F+ ++SEFEMS+ YAKNIVKKFG++ + HKRTPA T++K++KD G +VD L
Subjt: IVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDHKL
Query: YRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWFSK
YRSMIGSLLYLTASR DI YA+ +CAR+ +P+ SHLT +KRI+KYV+GT+D+ I+Y + + +LV YCDADWAGS +DRKSTS GCF+LGNNLISWFSK
Subjt: YRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWFSK
Query: KQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
KQNCVSLSTAEAEYIAAGS C+QL+WMK M +
Subjt: KQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
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| AAO73529.1 gag-pol polyprotein [Glycine max] | 7.4e-205 | 58.11 | Show/hide |
Query: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
M+HAK LP + WA +NTACYIHNR+T R GT TLYE+WKGRKP VK+FH FGS CYILADRE RK K + G+FLGYS N+RAYRVFN+RT TVME
Subjt: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
Query: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTS--TSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDY
+INV+V+D K+ D EED V TS D +K+ N D S + E + PS +K H IIGDP G+T+R ++
Subjt: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTS--TSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDY
Query: SKMIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVA
+++++ C+ IE + + AL DE+WINAMQEEL FKRN VW LVP+P+ N+IGTKWIFKNK +E G +TRNKARLVAQGY QIEGVDFDETFAPVA
Subjt: SKMIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVA
Query: RLEAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSS
RLE+I LLLG++CI KFK YQMDVK AFLNGYLNEE YV QPKGFVD P HVY++ KALY LKQAP+AWYE LT +L + Y +GG DKTLF+ + +
Subjt: RLEAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSS
Query: DLIVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDH
+L++AQIYVDDI+F G ++ F+ ++SEFEMS+ YAKNIVKKFG++ + HKRTPA T++K++KD G +VD
Subjt: DLIVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDH
Query: KLYRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWF
LYRSMIGSLLYLTASR DI YA+ +CAR+ +P+ SHL +KRI+KYV+GT+D+ I+Y + + S+LV YCDADWAGS +DRKSTS GCF+LGNNLISWF
Subjt: KLYRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWF
Query: SKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
SKKQNCVSLSTAEAEYIAAGS C+QL+WMK M +
Subjt: SKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
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| PNY10358.1 retrotransposon-related protein, partial [Trifolium pratense] | 4.0e-203 | 57.19 | Show/hide |
Query: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
M+HAKNLPL+FWA +NTACYIHNR+T R GT+ TLYELWK +KP VKYFH FGS CYILADRE RK K ++G+FLGYS N+RAYRVFN+RT T+ME
Subjt: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
Query: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTSTSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDYSK
+INV+++DS +++ D E + +P + + + + D++ +T +G PS +K+H +IGDP GIT+R+ + V
Subjt: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTSTSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDYSK
Query: MIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVARL
I++ C+ IE + + AL DEYWINAMQEEL FKR+ VW LVP+P++ N+IGTKW++KNK DE+G +TRNKARLVAQGY QIEGVDFDE FAPVARL
Subjt: MIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVARL
Query: EAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSSDL
E+I LLL ++CI KFK YQMDVK AFLNGYLNEE+YV QPKGFVD FP HVYK+ KALY LKQAP+AWYE LT +L N+ Y +GG DKTLF+ L
Subjt: EAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSSDL
Query: IVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDHKL
++AQIYVDDI+F G + +V+ F+ ++SEFEMS+ YAKNIVKKFG++ HKRTPA T++K+TKD G VD L
Subjt: IVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDHKL
Query: YRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWFSK
YRSMIGSLLYLTASR DI +A+ +CAR+ + SHL +KRI KYV+ T ++ ILYS+ S LV YCDADWAGS +DRKSTS CFFLGNNL+SWFSK
Subjt: YRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWFSK
Query: KQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
KQN VSLSTAEAEYIAAGS C+QL+WM+ M +
Subjt: KQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3P4Z0 Retrotransposon-related protein (Fragment) | 2.0e-203 | 57.19 | Show/hide |
Query: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
M+HAKNLPL+FWA +NTACYIHNR+T R GT+ TLYELWK +KP VKYFH FGS CYILADRE RK K ++G+FLGYS N+RAYRVFN+RT T+ME
Subjt: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
Query: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTSTSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDYSK
+INV+++DS +++ D E + +P + + + + D++ +T +G PS +K+H +IGDP GIT+R+ + V
Subjt: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTSTSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDYSK
Query: MIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVARL
I++ C+ IE + + AL DEYWINAMQEEL FKR+ VW LVP+P++ N+IGTKW++KNK DE+G +TRNKARLVAQGY QIEGVDFDE FAPVARL
Subjt: MIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVARL
Query: EAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSSDL
E+I LLL ++CI KFK YQMDVK AFLNGYLNEE+YV QPKGFVD FP HVYK+ KALY LKQAP+AWYE LT +L N+ Y +GG DKTLF+ L
Subjt: EAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSSDL
Query: IVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDHKL
++AQIYVDDI+F G + +V+ F+ ++SEFEMS+ YAKNIVKKFG++ HKRTPA T++K+TKD G VD L
Subjt: IVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDHKL
Query: YRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWFSK
YRSMIGSLLYLTASR DI +A+ +CAR+ + SHL +KRI KYV+ T ++ ILYS+ S LV YCDADWAGS +DRKSTS CFFLGNNL+SWFSK
Subjt: YRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWFSK
Query: KQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
KQN VSLSTAEAEYIAAGS C+QL+WM+ M +
Subjt: KQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
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| Q84VH6 Gag-pol polyprotein | 3.6e-205 | 58.11 | Show/hide |
Query: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
M+HAK LP + WA +NTACYIHNR+T R GT TLYE+WKGRKP VK+FH FGS CYILADRE RK K + G+FLGYS N+RAYRVFN+RT TVME
Subjt: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
Query: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTS--TSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDY
+INV+V+D K+ D EED V TS D +K+ N D S + E + PS +K H IIGDP G+T+R ++
Subjt: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTS--TSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDY
Query: SKMIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVA
+++++ C+ IE + + AL DE+WINAMQEEL FKRN VW LVP+P+ N+IGTKWIFKNK +E G +TRNKARLVAQGY QIEGVDFDETFAPVA
Subjt: SKMIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVA
Query: RLEAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSS
RLE+I LLLG++CI KFK YQMDVK AFLNGYLNEE YV QPKGFVD P HVY++ KALY LKQAP+AWYE LT +L + Y +GG DKTLF+ + +
Subjt: RLEAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSS
Query: DLIVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDH
+L++AQIYVDDI+F G ++ F+ ++SEFEMS+ YAKNIVKKFG++ + HKRTPA T++K++KD G +VD
Subjt: DLIVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDH
Query: KLYRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWF
LYRSMIGSLLYLTASR DI YA+ +CAR+ +P+ SHL +KRI+KYV+GT+D+ I+Y + + S+LV YCDADWAGS +DRKSTS GCF+LGNNLISWF
Subjt: KLYRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWF
Query: SKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
SKKQNCVSLSTAEAEYIAAGS C+QL+WMK M +
Subjt: SKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
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| Q84VH8 Gag-pol polyprotein | 7.9e-205 | 57.5 | Show/hide |
Query: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
M+HAK LP + WA +NTACYIHNR+T R GT TLYE+WKGRKP+VK+FH FGS CYILADRE RK K + G+FLGYS N+RAYRVFN+RT TVME
Subjt: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
Query: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTSTSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDYSK
+INV+V+D K+ D EED D +K+ N D S + E+ + S+ +K H IIGDP G+T+R ++ +
Subjt: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTSTSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDYSK
Query: MIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVARL
++++ C+ IE + + AL DE+WINAMQEEL FKRN VW LVP+P+ N+IGTKWIFKNK +E G +TRNKARLVAQGY QIEGVDFDETFAPVARL
Subjt: MIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVARL
Query: EAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSSDL
E+I LLLG++CI KFK YQMDVK AFLNGYLNEE+YV QPKGF D P HVY++ KALY LKQAP+AWYE LT +L + Y +GG DKTLF+ + + +L
Subjt: EAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSSDL
Query: IVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDHKL
++AQIYVDDI+F G ++ F+ ++SEFEMS+ YAKNIVKKFG++ + HKRTPA T++K++KD G +VD L
Subjt: IVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDHKL
Query: YRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWFSK
YRSMIGSLLYLTASR DI YA+ +CAR+ +P+ SHLT +KRI+KYV+GT+D+ I+Y + + +LV YCDADWAGS +DRKSTS GCF+LGNNLISWFSK
Subjt: YRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWFSK
Query: KQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
KQNCVSLSTAEAEYIAAGS C+QL+WMK M +
Subjt: KQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
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| Q84VI2 Gag-pol polyprotein | 4.7e-205 | 57.8 | Show/hide |
Query: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
M+HAK LP + WA +NTACYIHNR+T R GT TLYE+WKGRKP+VK+FH FGS CYILADRE RK K + G+FLGYS N+RAYRVFN+RT TVME
Subjt: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
Query: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTS--TSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDY
+INV+V+D K+ D EED V TS D +K+ N D S + E+ + S+ +K H IIGDP G+T+R ++
Subjt: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTS--TSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDY
Query: SKMIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVA
+++++ C+ IE + + AL DE+WINAMQEEL FKRN VW LVP+P+ N+IGTKWIFKNK +E G +TRNKARLVAQGY QIEGVDFDETFAPVA
Subjt: SKMIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVA
Query: RLEAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSS
RLE+I LLLG++CI KFK YQMDVK AFLNGYLNEE+YV QPKGF D P HVY++ KALY LKQAP+AWYE LT +L + Y +GG DKTLF+ + +
Subjt: RLEAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSS
Query: DLIVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDH
+L++AQIYVDDI+F G ++ F+ ++SEFEMS+ YAKNIVKKFG++ + HKRTPA T++K++KD G +VD
Subjt: DLIVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDH
Query: KLYRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWF
K YRSMIGSLLYLTASR DI YA+ +CAR+ +P+ SHL +KRI+KYV+GT+D+ I+Y + ++S+LV YCDADWAGS +DRKSTS GCF+LGNNLISWF
Subjt: KLYRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWF
Query: SKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
SKKQNCVSLSTAEAEYIAAGS C+QL+WMK M +
Subjt: SKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
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| Q84VI4 Gag-pol polyprotein | 3.6e-205 | 57.8 | Show/hide |
Query: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
M+HAK LP + WA +NTACYIHNR+T R GT TLYE+WKGRKP+VK+FH FGS CYILADRE RK K + G+FLGYS N+RAYRVFN+RT TVME
Subjt: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
Query: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTS--TSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDY
+INV+V+D K+ D EED V TS D +K+ N D S + E+ + S+ +K H IIGDP G+T+R ++
Subjt: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTS--TSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDY
Query: SKMIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVA
+++++ C+ IE + + AL DE+WINAMQEEL FKRN VW LVP+P+ N+IGTKWIFKNK +E G +TRNKARLVAQGY QIEGVDFDETFAPVA
Subjt: SKMIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVA
Query: RLEAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSS
RLE+I LLLG++CI KFK YQMDVK AFLNGYLNEE+YV QPKGF D P HVY++ KALY LKQAP+AWYE LT +L + Y +GG DKTLF+ + +
Subjt: RLEAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSS
Query: DLIVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDH
+L++AQIYVDDI+F G ++ F+ ++SEFEMS+ YAKNIVKKFG++ + HKRTPA T++K++KD G +VD
Subjt: DLIVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEMSM-------------------------YAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDH
Query: KLYRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWF
LYRSMIGSLLYLTASR DI YA+ +CAR+ +P+ SHLT +KRI+KYV+GT+D+ I+Y + + +LV YCDADWAGS +DRKSTS GCF+LGNNLISWF
Subjt: KLYRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWF
Query: SKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
SKKQNCVSLSTAEAEYIAAGS C+QL+WMK M +
Subjt: SKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 5.9e-56 | 32.45 | Show/hide |
Query: WINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVARLEAICLLLGISCIRKFKFYQMDVKR
W A+ EL K NN WT+ +P+ NI+ ++W+F K +E G R KARLVA+G+ Q +D++ETFAPVAR+ + +L + K +QMDVK
Subjt: WINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVARLEAICLLLGISCIRKFKFYQMDVKR
Query: AFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFI--NRTSSDLIVAQIYVDDIIFRGFPKALVDS
AFLNG L EE+Y+ P+G S +V K+NKA+Y LKQA + W+E L + D+ ++I ++ I +YVDD++ +++
Subjt: AFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFI--NRTSSDLIVAQIYVDDIIFRGFPKALVDS
Query: FIDIIKSEFEM-------------------------SMYAKNIVKKFGLDQSQHKRTP---AVTYVKITKDINGKTVDHKLYRSMIGSLLY-LTASRLDI
F + +F M S Y K I+ KF ++ TP + Y + D + T RS+IG L+Y + +R D+
Subjt: FIDIIKSEFEM-------------------------SMYAKNIVKKFGLDQSQHKRTP---AVTYVKITKDINGKTVDHKLYRSMIGSLLY-LTASRLDI
Query: AYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILY--SYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGN-NLISWFSKKQNCVSLSTAEAEYI
A+ I +R+ + +KR+++Y+ GT D ++++ + + ++ Y D+DWAGS DRKST+ F + + NLI W +K+QN V+ S+ EAEY+
Subjt: AYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILY--SYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGN-NLISWFSKKQNCVSLSTAEAEYI
Query: AAGSGCTQLIWMK
A + +W+K
Subjt: AAGSGCTQLIWMK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-67 | 27.88 | Show/hide |
Query: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
M+ LP FW + TACY+ NR + +W ++ + + FG + +E K K +F+GY YR+++ + V+
Subjt: MIHAKNLPLHFWARTINTACYIHNRITTRSGTNVTLYELWKGRKPNVKYFHNFGSTCYILADREYHRKWYAKLEQGLFLGYSQNNRAYRVFNNRTETVME
Query: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTSTSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGD---PFTG----------
+ +V+ +S+ + E K ++P ++ T+N S +ST+ E + +G P + Q + + P G
Subjt: TINVLVNDSKYTNKQIDDEEDEAPKVTLVPTSTSVDVSKADIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGD---PFTG----------
Query: ----ITSRKKDKVDYSKMIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYA
+ SR+ +Y + D E+ S + + AMQEE+ ++N + LV P + KW+FK K D + R KARLV +G+
Subjt: ----ITSRKKDKVDYSKMIADLCYALAIELTSFEAALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYA
Query: QIEGVDFDETFAPVARLEAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYS
Q +G+DFDE F+PV ++ +I +L ++ + Q+DVK AFL+G L EE+Y+ QP+GF + V K+NK+LY LKQAP+ WY ++ ++ Y
Subjt: QIEGVDFDETFAPVARLEAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYS
Query: RGGTDKTLFINRTS-SDLIVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEM---------------------------SMYAKNIVKKFGLDQSQHKRTP
+ +D ++ R S ++ I+ +YVDD++ G K L+ + F+M Y + ++++F + ++ TP
Subjt: RGGTDKTLFINRTS-SDLIVAQIYVDDIIFRGFPKALVDSFIDIIKSEFEM---------------------------SMYAKNIVKKFGLDQSQHKRTP
Query: AVTYVKITKDINGKTVDHK------LYRSMIGSLLY-LTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADW
++K++K + TV+ K Y S +GSL+Y + +R DIA+A+ + +RF +P H +K I++Y+ GTT + + + IL Y DAD
Subjt: AVTYVKITKDINGKTVDHK------LYRSMIGSLLY-LTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADW
Query: AGSTNDRKSTSSGCFFLGNNLISWFSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
AG ++RKS++ F ISW SK Q CV+LST EAEYIAA ++IW+K +
Subjt: AGSTNDRKSTSSGCFFLGNNLISWFSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMFHD
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 2.7e-24 | 33.78 | Show/hide |
Query: IYVDDIIFRGFPKALVDSFIDIIKSEFEM-------------------------SMYAKNIVKKFGLDQSQHKRTPAVTYVKITKDIN-GKTVDHKLYRS
+YVDDI+ G L++ I + S F M + YA+ I+ G+ + TP +K+ ++ K D +RS
Subjt: IYVDDIIFRGFPKALVDSFIDIIKSEFEM-------------------------SMYAKNIVKKFGLDQSQHKRTPAVTYVKITKDIN-GKTVDHKLYRS
Query: MIGSLLYLTASRLDIAYAIEI-CARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVK-YCDADWAGSTNDRKSTSSGCFFLGNNLISWFSKK
++G+L YLT +R DI+YA+ I C R H +P + +KR+++YV GT F LY + + + V+ +CD+DWAG T+ R+ST+ C FLG N+ISW +K+
Subjt: MIGSLLYLTASRLDIAYAIEI-CARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVK-YCDADWAGSTNDRKSTSSGCFFLGNNLISWFSKK
Query: QNCVSLSTAEAEYIAAGSGCTQLIW
Q VS S+ E EY A +L W
Subjt: QNCVSLSTAEAEYIAAGSGCTQLIW
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.3e-67 | 35.75 | Show/hide |
Query: YALAIELTSFE------AALKDEYWINAMQEELLPFKRNNVWTLV-PKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVAR
Y+LA+ L + ALKDE W NAM E+ N+ W LV P P I+G +WIF K + G + R KARLVA+GY Q G+D+ ETF+PV +
Subjt: YALAIELTSFE------AALKDEYWINAMQEELLPFKRNNVWTLV-PKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVAR
Query: LEAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSSD
+I ++LG++ R + Q+DV AFL G L +++Y++QP GF+D P +V K+ KALY LKQAP+AWY L YL + +D +LF+ +
Subjt: LEAICLLLGISCIRKFKFYQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSSD
Query: LIVAQIYVDDIIFRGFPKALVDSFIDIIKSEFE----------MSMYAKNIVKKFGLDQSQH-----KRTPAVTYVKITKDI----------NGKTVDHK
++ +YVDDI+ G L+ + +D + F + + AK + L Q ++ RT +T +T + K D
Subjt: LIVAQIYVDDIIFRGFPKALVDSFIDIIKSEFE----------MSMYAKNIVKKFGLDQSQH-----KRTPAVTYVKITKDI----------NGKTVDHK
Query: LYRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWFS
YR ++GSL YL +R DI+YA+ ++F P HL +KRI++Y+ GT + I T L Y DADWAG +D ST+ +LG++ ISW S
Subjt: LYRSMIGSLLYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWFS
Query: KKQNCVSLSTAEAEYIAAGSGCTQLIWM
KKQ V S+ EAEY + + +++ W+
Subjt: KKQNCVSLSTAEAEYIAAGSGCTQLIWM
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.0e-67 | 35.85 | Show/hide |
Query: ALKDEYWINAMQEELLPFKRNNVWTLV-PKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVARLEAICLLLGISCIRKFKF
A+KD+ W AM E+ N+ W LV P P I+G +WIF K + G + R KARLVA+GY Q G+D+ ETF+PV + +I ++LG++ R +
Subjt: ALKDEYWINAMQEELLPFKRNNVWTLV-PKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVARLEAICLLLGISCIRKFKF
Query: YQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSSDLIVAQIYVDDIIFRGFPK
Q+DV AFL G L +E+Y++QP GFVD P +V ++ KA+Y LKQAP+AWY L YL + +D +LF+ + +I +YVDDI+ G
Subjt: YQMDVKRAFLNGYLNEELYVAQPKGFVDSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSSDLIVAQIYVDDIIFRGFPK
Query: ALVDSFIDIIKSEFE----------MSMYAKNIVKKFGLDQSQHK---------------RTPAVTYVKITKDINGKTVDHKLYRSMIGSLLYLTASRLD
L+ +D + F + + AK + + L Q ++ TP T K+T K D YR ++GSL YL +R D
Subjt: ALVDSFIDIIKSEFE----------MSMYAKNIVKKFGLDQSQHK---------------RTPAVTYVKITKDINGKTVDHKLYRSMIGSLLYLTASRLD
Query: IAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWFSKKQNCVSLSTAEAEYIAA
++YA+ +++ P H +KR+++Y+ GT D I T L Y DADWAG T+D ST+ +LG++ ISW SKKQ V S+ EAEY +
Subjt: IAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWFSKKQNCVSLSTAEAEYIAA
Query: GSGCTQLIWM
+ ++L W+
Subjt: GSGCTQLIWM
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 6.5e-66 | 31.05 | Show/hide |
Query: TSTSVDVSKA-----DIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDYSKMIADLCYALAIELTSFEAALKDEYW
+S+S+D+ + D+ + S++ T K A ++ H +S+ + S +K Y + +C A A E +++ A + W
Subjt: TSTSVDVSKA-----DIETTNFDLSYKSTSKEATVEGTLSIPSSHFRKSHQSSSIIGDPFTGITSRKKDKVDYSKMIADLCYALAIELTSFEAALKDEYW
Query: INAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVARLEAICLLLGISCIRKFKFYQMDVKRA
AM +E+ + + W + P IG KW++K K + G + R KARLVA+GY Q EG+DF ETF+PV +L ++ L+L IS I F +Q+D+ A
Subjt: INAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVARLEAICLLLGISCIRKFKFYQMDVKRA
Query: FLNGYLNEELYVAQPKGFV----DSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSSDLIVAQIYVDDIIFRGFPKALVD
FLNG L+EE+Y+ P G+ DS P V + K++Y LKQA + W+ ++ L + + +D T F+ T++ + +YVDDII A VD
Subjt: FLNGYLNEELYVAQPKGFV----DSKFPQHVYKINKALYVLKQAPKAWYECLTIYLGNKVYSRGGTDKTLFINRTSSDLIVAQIYVDDIIFRGFPKALVD
Query: SFIDIIKSEFEM-------------------------SMYAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDHKLYRSMIGSLLYLTASRLDIAYA
+KS F++ YA +++ + GL + P V + G VD K YR +IG L+YL +RLDI++A
Subjt: SFIDIIKSEFEM-------------------------SMYAKNIVKKFGLDQSQHKRTPAVTYVKITKDINGKTVDHKLYRSMIGSLLYLTASRLDIAYA
Query: IEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWFSKKQNCVSLSTAEAEYIAAGSGC
+ ++F PR +H + +I+ Y+ GT + YS L + DA + + R+ST+ C FLG +LISW SKKQ VS S+AEAEY A
Subjt: IEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGCFFLGNNLISWFSKKQNCVSLSTAEAEYIAAGSGC
Query: TQLIWMKNMFHD
+++W+ F +
Subjt: TQLIWMKNMFHD
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 7.5e-06 | 29.55 | Show/hide |
Query: LYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGC-----FFLG
+YLT +R D+ +A+ ++F RT+ + + +++ YV GT + YS + L + D+DWA + R+S + C +FLG
Subjt: LYLTASRLDIAYAIEICARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVKYCDADWAGSTNDRKSTSSGC-----FFLG
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.9e-25 | 33.78 | Show/hide |
Query: IYVDDIIFRGFPKALVDSFIDIIKSEFEM-------------------------SMYAKNIVKKFGLDQSQHKRTPAVTYVKITKDIN-GKTVDHKLYRS
+YVDDI+ G L++ I + S F M + YA+ I+ G+ + TP +K+ ++ K D +RS
Subjt: IYVDDIIFRGFPKALVDSFIDIIKSEFEM-------------------------SMYAKNIVKKFGLDQSQHKRTPAVTYVKITKDIN-GKTVDHKLYRS
Query: MIGSLLYLTASRLDIAYAIEI-CARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVK-YCDADWAGSTNDRKSTSSGCFFLGNNLISWFSKK
++G+L YLT +R DI+YA+ I C R H +P + +KR+++YV GT F LY + + + V+ +CD+DWAG T+ R+ST+ C FLG N+ISW +K+
Subjt: MIGSLLYLTASRLDIAYAIEI-CARFHLDPRTSHLTFIKRIMKYVHGTTDFRILYSYYTTSILVK-YCDADWAGSTNDRKSTSSGCFFLGNNLISWFSKK
Query: QNCVSLSTAEAEYIAAGSGCTQLIW
Q VS S+ E EY A +L W
Subjt: QNCVSLSTAEAEYIAAGSGCTQLIW
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 4.1e-20 | 50 | Show/hide |
Query: ALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVARLEAICLLLGIS
ALKD W AMQEEL RN W LVP P NI+G KW+FK K+ G + R KARLVA+G+ Q EG+ F ET++PV R I +L ++
Subjt: ALKDEYWINAMQEELLPFKRNNVWTLVPKPDEANIIGTKWIFKNKIDESGCVTRNKARLVAQGYAQIEGVDFDETFAPVARLEAICLLLGIS
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