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Cmc02g0053541 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0053541
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCadherin-4 like
Genome locationCMiso1.1chr02:20956997..20960002
RNA-Seq ExpressionCmc02g0053541
SyntenyCmc02g0053541
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058224.1 uncharacterized protein E6C27_scaffold274G005480 [Cucumis melo var. makuwa]1.7e-85100Show/hide
Query:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
        MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
Subjt:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR

Query:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPT
        VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPT
Subjt:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPT

XP_004146333.1 uncharacterized protein LOC101223203 [Cucumis sativus]2.5e-8997.7Show/hide
Query:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
        MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIE+DLESSS+GADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
Subjt:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR

Query:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPTSKDNSNQPED
        VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDV+TPTSKDNSN PED
Subjt:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPTSKDNSNQPED

XP_008453565.1 PREDICTED: uncharacterized protein LOC103494240 [Cucumis melo]7.7e-91100Show/hide
Query:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
        MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
Subjt:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR

Query:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPTSKDNSNQPED
        VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPTSKDNSNQPED
Subjt:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPTSKDNSNQPED

XP_022932487.1 uncharacterized protein LOC111438888 isoform X1 [Cucurbita moschata]3.0e-7986.19Show/hide
Query:  MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRR
        MAR+ SLSQSFIS+K Q     LS+LIPSSF LGHRNRSTRSGKVKFIEIDLESSSFGADSE+LAIRKLDDFVQ+IIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVQTPTSKDNSNQPED
        NKPR+VVDLFDKLVEP+ KE+SPSLANARGWPCLDFFAKESISG TRL PVD+ELETSN  ELEI+V+TPTS DNSNQPED
Subjt:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVQTPTSKDNSNQPED

XP_038880607.1 uncharacterized protein LOC120072253 [Benincasa hispida]7.2e-8189.5Show/hide
Query:  MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRR
        MAR+ SLSQSFISSKFQ     LS+LIPSSF LGHRNRSTRSGKVKFIEIDLESSSF ADSE+LAIRKLDDFVQRIIVERSTP+WLPFVPGSSFWVPPRR
Subjt:  MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVQTPTSKDNSNQPED
        NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKES SG TRLAPVDTELETSN  ELEI+V+TPTS DNSNQPED
Subjt:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVQTPTSKDNSNQPED

TrEMBL top hitse value%identityAlignment
A0A0A0LZW6 Uncharacterized protein1.2e-8997.7Show/hide
Query:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
        MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIE+DLESSS+GADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
Subjt:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR

Query:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPTSKDNSNQPED
        VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDV+TPTSKDNSN PED
Subjt:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPTSKDNSNQPED

A0A1S3BXC7 uncharacterized protein LOC1034942403.7e-91100Show/hide
Query:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
        MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
Subjt:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR

Query:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPTSKDNSNQPED
        VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPTSKDNSNQPED
Subjt:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPTSKDNSNQPED

A0A5D3DYD5 Uncharacterized protein8.1e-86100Show/hide
Query:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
        MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR
Subjt:  MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRR

Query:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPT
        VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPT
Subjt:  VVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPT

A0A6J1EWU2 uncharacterized protein LOC111438888 isoform X11.5e-7986.19Show/hide
Query:  MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRR
        MAR+ SLSQSFIS+K Q     LS+LIPSSF LGHRNRSTRSGKVKFIEIDLESSSFGADSE+LAIRKLDDFVQ+IIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVQTPTSKDNSNQPED
        NKPR+VVDLFDKLVEP+ KE+SPSLANARGWPCLDFFAKESISG TRL PVD+ELETSN  ELEI+V+TPTS DNSNQPED
Subjt:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVQTPTSKDNSNQPED

A0A6J1IDD9 uncharacterized protein LOC111472830 isoform X13.3e-7986.19Show/hide
Query:  MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRR
        MAR+ SLSQSFIS+K Q     LS+LIPSSF LGHRNRSTRSGKVKFIEIDLESSSFGADSE+LAIRKLDDFVQ+IIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARVFSLSQSFISSKFQ-----LSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRR

Query:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVQTPTSKDNSNQPED
        NKPR+VVDLFDKLVEP+ KE+SPSLANARGWPCLDFFAKESISG TRL PVD ELETSN  ELEI+V+TPTS DNSNQPED
Subjt:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSN--ELEIDVQTPTSKDNSNQPED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16840.2 unknown protein9.9e-2041.13Show/hide
Query:  MARVFSLSQSFISSKFQL--SVLIPSSFTLGHRNRST-RSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPP--RR
        MAR FS S S    +F    S L+PSS  +  R++S+ R G +   EID  ++S      +  I+KL+D V RI V R+ PDWLPFVPG+S+WVPP    
Subjt:  MARVFSLSQSFISSKFQL--SVLIPSSFTLGHRNRST-RSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPP--RR

Query:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKES
        ++   +  L  KL  P+  E+S S  ++ GWP  D+F K S
Subjt:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKES

AT1G16840.3 unknown protein1.7e-1941.01Show/hide
Query:  MARVFSLSQSFISSKFQL--SVLIPSSFTLGHRNRST-RSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPP--RR
        MAR FS S S    +F    S L+PSS  +  R++S+ R G +   EID  ++S      +  I+KL+D V RI V R+ PDWLPFVPG+S+WVPP    
Subjt:  MARVFSLSQSFISSKFQL--SVLIPSSFTLGHRNRST-RSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPP--RR

Query:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAK
        ++   +  L  KL  P+  E+S S  ++ GWP  D+F K
Subjt:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAK

AT1G16840.4 unknown protein1.7e-1941.01Show/hide
Query:  MARVFSLSQSFISSKFQL--SVLIPSSFTLGHRNRST-RSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPP--RR
        MAR FS S S    +F    S L+PSS  +  R++S+ R G +   EID  ++S      +  I+KL+D V RI V R+ PDWLPFVPG+S+WVPP    
Subjt:  MARVFSLSQSFISSKFQL--SVLIPSSFTLGHRNRST-RSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPP--RR

Query:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAK
        ++   +  L  KL  P+  E+S S  ++ GWP  D+F K
Subjt:  NKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAK

AT1G78890.1 unknown protein6.6e-2444.29Show/hide
Query:  MARVFSLSQSFISSKF-QLSVLIPSSFTLGHR----NRSTRSGKVKFI-EIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPR
        MAR  S S S    +F   S+L+PSS T+  R    NR + S  +  I EID+ +           + KL+D V RI+V RS PDWLPFVPG+SFWVPP 
Subjt:  MARVFSLSQSFISSKF-QLSVLIPSSFTLGHR----NRSTRSGKVKFI-EIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPR

Query:  RNKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAK
        R++   +  L +KL  PI+ E+S S+++ RGWPC D+F K
Subjt:  RNKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAK

AT2G19180.1 unknown protein1.1e-2139.26Show/hide
Query:  IEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKE---SISG
        IE++++S +   ++E   ++KL++FV+RIIV  STPDWLPF PGSSFWVPP +    ++ +L DK+  P+ +E+S SL++  GWPC  FF      S S 
Subjt:  IEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRRVVDLFDKLVEPIAKEDSPSLANARGWPCLDFFAKE---SISG

Query:  PTRLAPVDTELETSNELEIDVQTPTSKDNSNQPED
            A V+ ++  +  LE+ +        S +PED
Subjt:  PTRLAPVDTELETSNELEIDVQTPTSKDNSNQPED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGGGTTTTTTCTCTTTCCCAGTCTTTCATCTCCTCCAAGTTTCAATTATCGGTTTTGATTCCGTCTTCCTTTACTCTCGGTCATCGGAACCGCTCTACACGGTC
CGGCAAGGTCAAATTCATCGAAATTGATCTCGAGTCTTCCTCTTTCGGGGCTGATTCAGAGATTCTTGCTATTAGGAAGCTCGACGACTTTGTACAGAGGATTATTGTTG
AGCGATCCACTCCTGATTGGCTTCCGTTTGTGCCCGGTTCGTCTTTTTGGGTTCCTCCACGCCGTAACAAACCACGCAGGGTTGTCGACCTATTTGATAAATTGGTTGAA
CCGATCGCTAAAGAGGACTCCCCTTCCCTTGCTAACGCCCGTGGTTGGCCCTGCTTAGATTTTTTCGCCAAAGAATCTATCTCTGGACCAACTCGATTAGCTCCAGTAGA
TACCGAGTTGGAAACTTCAAACGAGTTGGAGATTGACGTGCAGACACCAACAAGTAAAGATAACTCAAATCAGCCAGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
AATCATTTATTTGTTAAAGGAAAACACACCGTCGATATTATTGCCGATGCTTACGACATTGGATAATTCAACCAAATTTGTTGTATATAAATATAAATCGCTCAATGGGG
AAAGTTTAATCTTTTTTTCCAAATTTATTCATCCTCGAATCTGAAGTTCGTTCTCTTCTCACACCCATAGCTGAAGAGATAGAGGGAAAAAGGAGTAGTTCTTCGATTTA
TAGAGCTCAAAGTTCGTCTGCTGTTCTTCGCATGGCCCGGGTTTTTTCTCTTTCCCAGTCTTTCATCTCCTCCAAGTTTCAATTATCGGTTTTGATTCCGTCTTCCTTTA
CTCTCGGTCATCGGAACCGCTCTACACGGTCCGGCAAGGTCAAATTCATCGAAATTGATCTCGAGTCTTCCTCTTTCGGGGCTGATTCAGAGATTCTTGCTATTAGGAAG
CTCGACGACTTTGTACAGAGGATTATTGTTGAGCGATCCACTCCTGATTGGCTTCCGTTTGTGCCCGGTTCGTCTTTTTGGGTTCCTCCACGCCGTAACAAACCACGCAG
GGTTGTCGACCTATTTGATAAATTGGTTGAACCGATCGCTAAAGAGGACTCCCCTTCCCTTGCTAACGCCCGTGGTTGGCCCTGCTTAGATTTTTTCGCCAAAGAATCTA
TCTCTGGACCAACTCGATTAGCTCCAGTAGATACCGAGTTGGAAACTTCAAACGAGTTGGAGATTGACGTGCAGACACCAACAAGTAAAGATAACTCAAATCAGCCAGAG
GATTGAGAAAGAAGAATCTCATACCTCATCCACTAACGGAGTTGGTTGGGAGCGTTAGATGGCTGTCAGAGATTTGAGAGACCGAACGGGGTGGAAAGTGATGGTGATGA
GAGGTCGGAGAGAAATAGGGTGCTCTACAGACAGTTCCAGTTTGGATGCTGTGGTATTCACTTCCATTTGCTTCGTCTAAACTGCCCTGTCTACTTGAAGCCCACTCTGC
ACCCCTTCCCCCAAACTAATGGTTGTTTATGCTTCGTTGTCCTGGGACAAAATTCACCAGCTTGTTATTTAAATGAGGTGAATTATCAAGTTGTCAACCACTGTTCTGTC
AAATCTATGCACAGTTCAATAAAAGAAATCTCCCTTGTGTCTGTGTAAAGTAACTGATAAATCGTTCTCCATTTCAAGTGGTTGAAGATCAATCTAAGCTCGTAGTTGCA
ATATTTTCTGACTTTGGAACTTTTGTGCTTTTGGTATAGCAAGTTAGTTCTCTTTTATGGGTTTATTATGTGTTGTTAGAACATTGATGAACTGCTTCTTGTTGATATAT
ATATACACACATAC
Protein sequenceShow/hide protein sequence
MARVFSLSQSFISSKFQLSVLIPSSFTLGHRNRSTRSGKVKFIEIDLESSSFGADSEILAIRKLDDFVQRIIVERSTPDWLPFVPGSSFWVPPRRNKPRRVVDLFDKLVE
PIAKEDSPSLANARGWPCLDFFAKESISGPTRLAPVDTELETSNELEIDVQTPTSKDNSNQPED