| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.1e-174 | 79.1 | Show/hide |
Query: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
MT VRSLLAIAAAKQW LLQMDVKN FLNGT+ EEVYMKPPPGTTPPPQKVCLL RALYGLKQAPRAWFATF+STITQLGFTSSSHDS LFTRQTPNGIV
Subjt: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
Query: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
LLLLYVDDMIITGDD QAIS+LQ YL K+FEMKDLGNL+YF GLEISSS SGYYLSQAKYASDLLNR G TDSATF TPLDPNVRLTPFDGVPL+DPTLY
Subjt: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
Query: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLP--LVQFT-------------------------------------------SLPSFSFF----ATSKRSKK
RQLVGSLIYLTVTRPDIAYAVHIVSQ + FT S + F+ S RSKK
Subjt: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLP--LVQFT-------------------------------------------SLPSFSFF----ATSKRSKK
Query: QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
QSVVSRSSTESEYRALADATSEL+WLRWLLTDMGAPQTSPTILHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
Subjt: QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
Query: LHSPHFTQLIHKLKVVSTLPS
LHSP FTQLIHKLKVVSTLPS
Subjt: LHSPHFTQLIHKLKVVSTLPS
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| KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.1e-174 | 79.1 | Show/hide |
Query: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
MT VRSLLAIAAAKQW LLQMDVKN FLNGT+ EEVYMKPPPGTTPPPQKVCLL RALYGLKQAPRAWFATF+STITQLGFTSSSHDS LFTRQTPNGIV
Subjt: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
Query: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
LLLLYVDDMIITGDD QAIS+LQ YL K+FEMKDLGNL+YF GLEISSS SGYYLSQAKYASDLLNR G TDSATF TPLDPNVRLTPFDGVPL+DPTLY
Subjt: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
Query: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLP--LVQFT-------------------------------------------SLPSFSFF----ATSKRSKK
RQLVGSLIYLTVTRPDIAYAVHIVSQ + FT S + F+ S RSKK
Subjt: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLP--LVQFT-------------------------------------------SLPSFSFF----ATSKRSKK
Query: QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
QSVVSRSSTESEYRALADATSEL+WLRWLLTDMGAPQTSPTILHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
Subjt: QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
Query: LHSPHFTQLIHKLKVVSTLPS
LHSP FTQLIHKLKVVSTLPS
Subjt: LHSPHFTQLIHKLKVVSTLPS
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| KAA0058220.1 putative mitochondrial protein [Cucumis melo var. makuwa] | 1.6e-202 | 96.27 | Show/hide |
Query: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
Subjt: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
Query: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
Subjt: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
Query: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLPLVQFTSLPSFSFFATSK---RSKKQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCD
RQLVGSLIYLTVTRPDIAYAVHIVSQLWLPLVQFTSLPSFSFFATSK S + TESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCD
Subjt: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLPLVQFTSLPSFSFFATSK---RSKKQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCD
Query: NCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPHFTQLIHKLKVVSTLPS
NCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPHFTQLIHKLKVVSTLPS
Subjt: NCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPHFTQLIHKLKVVSTLPS
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| KAA0065380.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.1e-174 | 79.1 | Show/hide |
Query: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
MT VRSLLAIAAAKQW LLQMDVKN FLNGT+ EEVYMKPPPGTTPPPQKVCLL RALYGLKQAPRAWFATF+STITQLGFTSSSHDS LFTRQTPNGIV
Subjt: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
Query: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
LLLLYVDDMIITGDD QAIS+LQ YL K+FEMKDLGNL+YF GLEISSS SGYYLSQAKYASDLLNR G TDSATF TPLDPNVRLTPFDGVPL+DPTLY
Subjt: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
Query: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLP--LVQFT-------------------------------------------SLPSFSFF----ATSKRSKK
RQLVGSLIYLTVTRPDIAYAVHIVSQ + FT S + F+ S RSKK
Subjt: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLP--LVQFT-------------------------------------------SLPSFSFF----ATSKRSKK
Query: QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
QSVVSRSSTESEYRALADATSEL+WLRWLLTDMGAPQTSPTILHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
Subjt: QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
Query: LHSPHFTQLIHKLKVVSTLPS
LHSP FTQLIHKLKVVSTLPS
Subjt: LHSPHFTQLIHKLKVVSTLPS
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| TYK12316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.1e-174 | 79.1 | Show/hide |
Query: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
MT VRSLLAIAAAKQW LLQMDVKN FLNGT+ EEVYMKPPPGTTPPPQKVCLL RALYGLKQAPRAWFATF+STITQLGFTSSSHDS LFTRQTPNGIV
Subjt: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
Query: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
LLLLYVDDMIITGDD QAIS+LQ YL K+FEMKDLGNL+YF GLEISSS SGYYLSQAKYASDLLNR G TDSATF TPLDPNVRLTPFDGVPL+DPTLY
Subjt: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
Query: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLP--LVQFT-------------------------------------------SLPSFSFF----ATSKRSKK
RQLVGSLIYLTVTRPDIAYAVHIVSQ + FT S + F+ S RSKK
Subjt: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLP--LVQFT-------------------------------------------SLPSFSFF----ATSKRSKK
Query: QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
QSVVSRSSTESEYRALADATSEL+WLRWLLTDMGAPQTSPTILHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
Subjt: QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
Query: LHSPHFTQLIHKLKVVSTLPS
LHSP FTQLIHKLKVVSTLPS
Subjt: LHSPHFTQLIHKLKVVSTLPS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.2e-175 | 79.1 | Show/hide |
Query: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
MT VRSLLAIAAAKQW LLQMDVKN FLNGT+ EEVYMKPPPGTTPPPQKVCLL RALYGLKQAPRAWFATF+STITQLGFTSSSHDS LFTRQTPNGIV
Subjt: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
Query: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
LLLLYVDDMIITGDD QAIS+LQ YL K+FEMKDLGNL+YF GLEISSS SGYYLSQAKYASDLLNR G TDSATF TPLDPNVRLTPFDGVPL+DPTLY
Subjt: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
Query: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLP--LVQFT-------------------------------------------SLPSFSFF----ATSKRSKK
RQLVGSLIYLTVTRPDIAYAVHIVSQ + FT S + F+ S RSKK
Subjt: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLP--LVQFT-------------------------------------------SLPSFSFF----ATSKRSKK
Query: QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
QSVVSRSSTESEYRALADATSEL+WLRWLLTDMGAPQTSPTILHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
Subjt: QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
Query: LHSPHFTQLIHKLKVVSTLPS
LHSP FTQLIHKLKVVSTLPS
Subjt: LHSPHFTQLIHKLKVVSTLPS
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| A0A5A7UST7 Putative mitochondrial protein | 7.7e-203 | 96.27 | Show/hide |
Query: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
Subjt: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
Query: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
Subjt: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
Query: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLPLVQFTSLPSFSFFATSK---RSKKQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCD
RQLVGSLIYLTVTRPDIAYAVHIVSQLWLPLVQFTSLPSFSFFATSK S + TESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCD
Subjt: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLPLVQFTSLPSFSFFATSK---RSKKQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCD
Query: NCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPHFTQLIHKLKVVSTLPS
NCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPHFTQLIHKLKVVSTLPS
Subjt: NCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPHFTQLIHKLKVVSTLPS
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| A0A5A7VDW0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.2e-175 | 79.1 | Show/hide |
Query: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
MT VRSLLAIAAAKQW LLQMDVKN FLNGT+ EEVYMKPPPGTTPPPQKVCLL RALYGLKQAPRAWFATF+STITQLGFTSSSHDS LFTRQTPNGIV
Subjt: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
Query: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
LLLLYVDDMIITGDD QAIS+LQ YL K+FEMKDLGNL+YF GLEISSS SGYYLSQAKYASDLLNR G TDSATF TPLDPNVRLTPFDGVPL+DPTLY
Subjt: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
Query: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLP--LVQFT-------------------------------------------SLPSFSFF----ATSKRSKK
RQLVGSLIYLTVTRPDIAYAVHIVSQ + FT S + F+ S RSKK
Subjt: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLP--LVQFT-------------------------------------------SLPSFSFF----ATSKRSKK
Query: QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
QSVVSRSSTESEYRALADATSEL+WLRWLLTDMGAPQTSPTILHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
Subjt: QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
Query: LHSPHFTQLIHKLKVVSTLPS
LHSP FTQLIHKLKVVSTLPS
Subjt: LHSPHFTQLIHKLKVVSTLPS
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| A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.2e-175 | 79.1 | Show/hide |
Query: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
MT VRSLLAIAAAKQW LLQMDVKN FLNGT+ EEVYMKPPPGTTPPPQKVCLL RALYGLKQAPRAWFATF+STITQLGFTSSSHDS LFTRQTPNGIV
Subjt: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
Query: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
LLLLYVDDMIITGDD QAIS+LQ YL K+FEMKDLGNL+YF GLEISSS SGYYLSQAKYASDLLNR G TDSATF TPLDPNVRLTPFDGVPL+DPTLY
Subjt: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
Query: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLP--LVQFT-------------------------------------------SLPSFSFF----ATSKRSKK
RQLVGSLIYLTVTRPDIAYAVHIVSQ + FT S + F+ S RSKK
Subjt: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLP--LVQFT-------------------------------------------SLPSFSFF----ATSKRSKK
Query: QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
QSVVSRSSTESEYRALADATSEL+WLRWLLTDMGAPQTSPTILHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
Subjt: QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
Query: LHSPHFTQLIHKLKVVSTLPS
LHSP FTQLIHKLKVVSTLPS
Subjt: LHSPHFTQLIHKLKVVSTLPS
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| A0A5D3DWU7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.2e-175 | 79.1 | Show/hide |
Query: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
MT VRSLLAIAAAKQW LLQMDVKN FLNGT+ EEVYMKPPPGTTPPPQKVCLL RALYGLKQAPRAWFATF+STITQLGFTSSSHDS LFTRQTPNGIV
Subjt: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIV
Query: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
LLLLYVDDMIITGDD QAIS+LQ YL K+FEMKDLGNL+YF GLEISSS SGYYLSQAKYASDLLNR G TDSATF TPLDPNVRLTPFDGVPL+DPTLY
Subjt: LLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLY
Query: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLP--LVQFT-------------------------------------------SLPSFSFF----ATSKRSKK
RQLVGSLIYLTVTRPDIAYAVHIVSQ + FT S + F+ S RSKK
Subjt: RQLVGSLIYLTVTRPDIAYAVHIVSQLWLP--LVQFT-------------------------------------------SLPSFSFF----ATSKRSKK
Query: QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
QSVVSRSSTESEYRALADATSEL+WLRWLLTDMGAPQTSPTILHCDN SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
Subjt: QSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKA
Query: LHSPHFTQLIHKLKVVSTLPS
LHSP FTQLIHKLKVVSTLPS
Subjt: LHSPHFTQLIHKLKVVSTLPS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.0e-50 | 32.53 | Show/hide |
Query: RSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLF--TRQTPNGIVLL
R +L++ + QMDVK FLNGT+ EE+YM+ P G + VC L++A+YGLKQA R WF F + + F +SS D ++ + N + +
Subjt: RSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLF--TRQTPNGIVLL
Query: LLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLYRQ
LLYVDD++I D ++N + YL++ F M DL + +F G+ I YLSQ+ Y +L++ + TPL + + D T R
Subjt: LLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLYRQ
Query: LVGSLIYLTV-TRPDIAYAVHIV--------SQLWLPLVQFTS--------------------------------------------LPSFSFFATSKRS
L+G L+Y+ + TRPD+ AV+I+ S+LW L + F F +
Subjt: LVGSLIYLTV-TRPDIAYAVHIV--------SQLWLPLVQFTS--------------------------------------------LPSFSFFATSKRS
Query: KKQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFT
K+Q+ V+ SSTE+EY AL +A E LWL++LLT + +P ++ DN I IA+N H+R KHI+ HF R +Q+N + L+ I T +Q ADIFT
Subjt: KKQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFT
Query: KALHSPHFTQLIHKL
K L + F +L KL
Subjt: KALHSPHFTQLIHKL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-47 | 33.74 | Show/hide |
Query: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQK--VCLLHRALYGLKQAPRAWFATFNSTI-TQLGFTSSSHDSTLFTRQTPN
MT +R++L++AA+ + Q+DVK FL+G + EE+YM+ P G +K VC L+++LYGLKQAPR W+ F+S + +Q + S F R + N
Subjt: MTFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPPPQK--VCLLHRALYGLKQAPRAWFATFNSTI-TQLGFTSSSHDSTLFTRQTPN
Query: GIVLLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEI--SSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRL------TPF
++LLLYVDDM+I G D I+ L+ L K+F+MKDLG G++I + +LSQ KY +L R ++ TPL +++L T
Subjt: GIVLLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEI--SSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRL------TPF
Query: DGVPLDDPTLYRQLVGSLIYLTV-TRPDIAYAVHIVSQL-------------WL------------------PLVQ-FTS----------------LPSF
+ Y VGSL+Y V TRPDIA+AV +VS+ W+ P+++ +T L +F
Subjt: DGVPLDDPTLYRQLVGSLIYLTV-TRPDIAYAVHIVSQL-------------WL------------------PLVQ-FTS----------------LPSF
Query: SFFATSKRSKKQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPIST
S A S +SK Q V+ S+TE+EY A + E++WL+ L ++G Q +++CD+ SAI ++ N ++H RTKHI+ H++R + +L + IST
Subjt: SFFATSKRSKKQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPIST
Query: TDQPADIFTKAL
+ PAD+ TK +
Subjt: TDQPADIFTKAL
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.8e-23 | 33.81 | Show/hide |
Query: MDVKNVFLNGTIYEEVYMKPPPG--TTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIVLLLLYVDDMIITGDDSQA
MDV FLN T+ E +Y+K PPG P V L+ +YGLKQAP W N+T+ ++GF + L+ R T +G + + +YVDD+++ +
Subjt: MDVKNVFLNGTIYEEVYMKPPPG--TTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGIVLLLLYVDDMIITGDDSQA
Query: ISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSG-YYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVT-RPD
++ L K + MKDLG + F GL I S +G LS Y + + TPL + L L D T Y+ +VG L++ T RPD
Subjt: ISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSG-YYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVT-RPD
Query: IAYAVHIVSQ
I+Y V ++S+
Subjt: IAYAVHIVSQ
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.0e-70 | 38.39 | Show/hide |
Query: TFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPG--TTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGI
T +R +L +A + W + Q+DV N FL GT+ ++VYM PPG P VC L +ALYGLKQAPRAW+ + + +GF +S D++LF Q I
Subjt: TFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPG--TTPPPQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGI
Query: VLLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTL
V +L+YVDD++ITG+D + N L + F +KD L YF G+E P+G +LSQ +Y DLL R + TP+ P+ +L+ + G L DPT
Subjt: VLLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTL
Query: YRQLVGSLIYLTVTRPDIAYAVHIVSQ---------------------------LWLPLVQFTSLPSFS----------FFAT------------SKRSK
YR +VGSL YL TRPDI+YAV+ +SQ ++L SL ++S + +T S SK
Subjt: YRQLVGSLIYLTVTRPDIAYAVHIVSQ---------------------------LWLPLVQFTSLPSFS----------FFAT------------SKRSK
Query: KQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTK
KQ V RSSTE+EYR++A+ +SE+ W+ LLT++G T P +++CDN A + N VFH R KHI D HF+R+ +QS L + +ST DQ AD TK
Subjt: KQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTK
Query: ALHSPHFTQLIHKLKVVSTLPS
L F K+ V PS
Subjt: ALHSPHFTQLIHKLKVVSTLPS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.3e-69 | 37.44 | Show/hide |
Query: TFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPP--PQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGI
T +R +L +A + W + Q+DV N FL GT+ +EVYM PPG P VC L +A+YGLKQAPRAW+ + + +GF +S D++LF Q I
Subjt: TFVRSLLAIAAAKQWHLLQMDVKNVFLNGTIYEEVYMKPPPGTTPP--PQKVCLLHRALYGLKQAPRAWFATFNSTITQLGFTSSSHDSTLFTRQTPNGI
Query: VLLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTL
+ +L+YVDD++ITG+D+ + + L + F +K+ +L YF G+E P G +LSQ +Y DLL R + TP+ + +LT G L DPT
Subjt: VLLLLYVDDMIITGDDSQAISNLQYYLIKNFEMKDLGNLSYFPGLEISSSPSGYYLSQAKYASDLLNRPGTTDSATFLTPLDPNVRLTPFDGVPLDDPTL
Query: YRQLVGSLIYLTVTRPDIAYAVHIVSQ---------------------------LWLPLVQFTSLPSFS----------FFAT------------SKRSK
YR +VGSL YL TRPD++YAV+ +SQ ++L SL ++S + +T S SK
Subjt: YRQLVGSLIYLTVTRPDIAYAVHIVSQ---------------------------LWLPLVQFTSLPSFS----------FFAT------------SKRSK
Query: KQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTK
KQ V RSSTE+EYR++A+ +SEL W+ LLT++G + P +++CDN A + N VFH R KHI D HF+R+ +QS L + +ST DQ AD TK
Subjt: KQSVVSRSSTESEYRALADATSELLWLRWLLTDMGAPQTSPTILHCDNCSAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTK
Query: ALHSPHFTQLIHKLKVVSTLPS
L F K+ V+ PS
Subjt: ALHSPHFTQLIHKLKVVSTLPS
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