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Cmc02g0054251 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0054251
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPhotosystem II reaction center protein Z
Genome locationCMiso1.1chr02:21541904..21542182
RNA-Seq ExpressionCmc02g0054251
SyntenyCmc02g0054251
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0042549 - photosystem II stabilization (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009539 - photosystem II reaction center (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR002644 - Photosystem II PsbZ, reaction centre
IPR036512 - Photosystem II PsbZ superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4394533.1 hypothetical protein F8388_020358 [Cannabis sativa]1.2e-2179.76Show/hide
Query:  WLAGKGIEWYI--LLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        +LA K I+WYI  LLV+WRIRNMTIAFQLA FALI TSSILLISVP+VFAS DG SGN+NVV SST L IGLVFLVGILNS IS
Subjt:  WLAGKGIEWYI--LLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS

QWC53576.1 photosystem II protein Z [Choerospondias axillaris]1.4e-2278.82Show/hide
Query:  WLAGKGIEWY---ILLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        +LA +GI+WY    LLV WRIRNMTIAFQLA FALI TSSILLISVP+VFASPDG S NKNVV S T L IGLVFLVGILNSLIS
Subjt:  WLAGKGIEWY---ILLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS

QXP99927.1 photosystem II protein Z [Artocarpus tonkinensis]1.2e-2178.57Show/hide
Query:  WLAGKGIEWYI--LLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        +L  K I+WYI  LLVDWRIRNMTIAFQLA FALI TSSILLISVP+VFASPDG   NKNVV S T L I LVFLVGILNSLIS
Subjt:  WLAGKGIEWYI--LLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS

YP_009942083.1 photosystem II protein Z [Hovenia dulcis]1.4e-2273.86Show/hide
Query:  YILSKFWLAGKGIEWYILLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        +  + FWL  +     +LLVDWRIRNMTIAFQLA FALI TSSILLISVP+VFASPDG +GNKNVV S T L IGLVFLVGILNSLIS
Subjt:  YILSKFWLAGKGIEWYILLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS

YP_010035510.1 photosystem II protein Z [Pouzolzia hirta]6.2e-2380.95Show/hide
Query:  WLAGKGIEWYI--LLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        +LA K I+WYI  LLVDWRIRNMTIAFQLA FALI+TS ILLISVP+VFASPDG   NKNVVVS T L IGLVFLVGILNSLIS
Subjt:  WLAGKGIEWYI--LLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS

TrEMBL top hitse value%identityAlignment
A0A6B9TW67 Photosystem II reaction center protein Z1.3e-2172.73Show/hide
Query:  YILSKFWLAGKGIEWYILLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        +  + FWL        +LLVDWRIRNMTIAFQLA FALI TS ILLISVP+VFASP+G SGNKNVV S T L IGLVFLVGILNSLIS
Subjt:  YILSKFWLAGKGIEWYILLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS

A0A7J6ENX8 Photosystem II reaction center protein Z5.7e-2279.76Show/hide
Query:  WLAGKGIEWYI--LLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        +LA K I+WYI  LLV+WRIRNMTIAFQLA FALI TSSILLISVP+VFAS DG SGN+NVV SST L IGLVFLVGILNS IS
Subjt:  WLAGKGIEWYI--LLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS

A0A7J6HGV5 Photosystem II reaction center protein Z5.7e-2279.76Show/hide
Query:  WLAGKGIEWYI--LLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        +LA K I+WYI  LLV+WRIRNMTIAFQLA FALI TSSILLISVP+VFAS DG SGN+NVV SST L IGLVFLVGILNS IS
Subjt:  WLAGKGIEWYI--LLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS

A0A7L7T933 Photosystem II reaction center protein Z6.7e-2373.86Show/hide
Query:  YILSKFWLAGKGIEWYILLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        +  + FWL  +     +LLVDWRIRNMTIAFQLA FALI TSSILLISVP+VFASPDG +GNKNVV S T L IGLVFLVGILNSLIS
Subjt:  YILSKFWLAGKGIEWYILLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS

A0A7T8V683 Photosystem II protein Z3.0e-2380.95Show/hide
Query:  WLAGKGIEWYI--LLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        +LA K I+WYI  LLVDWRIRNMTIAFQLA FALI+TS ILLISVP+VFASPDG   NKNVVVS T L IGLVFLVGILNSLIS
Subjt:  WLAGKGIEWYI--LLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS

SwissProt top hitse value%identityAlignment
P56790 Photosystem II reaction center protein Z3.7e-1885.48Show/hide
Query:  MTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLA FALI+TSSILLISVP+VFASPDG S NKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS

Q09MI1 Photosystem II reaction center protein Z8.2e-1885.48Show/hide
Query:  MTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLA FALI TSSILLISVP+VFASPDG S NKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS

Q32902 Photosystem II reaction center protein Z2.8e-1887.1Show/hide
Query:  MTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLA FALIVTSSILLISVP+VFASPDG S NKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS

Q4VZN6 Photosystem II reaction center protein Z5.6e-1988.71Show/hide
Query:  MTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLA FALIVTSSILLISVP+VFASPDG SGNKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS

Q5QA82 Photosystem II reaction center protein Z8.2e-1885.48Show/hide
Query:  MTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLA FALI TSSILLISVP+VFASPDG S NKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS

Arabidopsis top hitse value%identityAlignment
ATCG00300.1 YCF92.6e-1985.48Show/hide
Query:  MTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLA FALI+TSSILLISVP+VFASPDG S NKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCCTTATACATTTTATCAAAATTTTGGCTAGCTGGTAAAGGGATCGAATGGTATATTTTGTTGGTAGATTGGAGGATTAGAAACATGACTATTGCTTTCCAATT
GGCTAATTTTGCATTAATTGTTACTTCATCAATCTTATTGATTAGTGTGCCCATTGTATTTGCTTCTCCTGATGGTGGGTCGGGTAACAAAAATGTTGTAGTTTCCAGTA
CATTATTACGGATTGGATTAGTCTTTCTTGTAGGTATCCTTAATTCTCTTATCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCCTTATACATTTTATCAAAATTTTGGCTAGCTGGTAAAGGGATCGAATGGTATATTTTGTTGGTAGATTGGAGGATTAGAAACATGACTATTGCTTTCCAATT
GGCTAATTTTGCATTAATTGTTACTTCATCAATCTTATTGATTAGTGTGCCCATTGTATTTGCTTCTCCTGATGGTGGGTCGGGTAACAAAAATGTTGTAGTTTCCAGTA
CATTATTACGGATTGGATTAGTCTTTCTTGTAGGTATCCTTAATTCTCTTATCTCTTAA
Protein sequenceShow/hide protein sequence
MPPLYILSKFWLAGKGIEWYILLVDWRIRNMTIAFQLANFALIVTSSILLISVPIVFASPDGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS