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Cmc02g0054411 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0054411
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPhotosystem II D2 protein
Genome locationCMiso1.1chr02:21587491..21587688
RNA-Seq ExpressionCmc02g0054411
SyntenyCmc02g0054411
Gene Ontology termsGO:0009772 - photosynthetic electron transport in photosystem II (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0005506 - iron ion binding (molecular function)
GO:0010242 - oxygen evolving activity (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAD17354.1 rice chloroplast PSII D2 protein [Oryza sativa Japonica Group]1.2e-2087.3Show/hide
Query:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF
        MGVAGVLGA L C ILGA VENTLFED DG NTF AFN TQAEETYSMVTANRFWSQIFGVAF
Subjt:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF

KAA0032899.1 photosystem II CP43 reaction center protein-like [Cucumis melo var. makuwa]9.1e-2187.3Show/hide
Query:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF
        MGVAGVLGA L C I GA VENTLFED DG NTFHAFN TQAEETYSMVTANRFWSQIFGVAF
Subjt:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF

KAF2944620.1 hypothetical protein DAI22_02g155901 [Oryza sativa Japonica Group]1.2e-2087.3Show/hide
Query:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF
        MGVAGVLGA L C ILGA VENTLFED DG NTF AFN TQAEETYSMVTANRFWSQIFGVAF
Subjt:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF

KRH62235.1 hypothetical protein GLYMA_04G095000v4 [Glycine max]1.6e-2087.3Show/hide
Query:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF
        MGVAGVLG TL CVI GA VENTLFED DG NTF AFN TQAEETYSMVTANRFWSQIFGVAF
Subjt:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF

PVH47814.1 hypothetical protein PAHAL_4G159500 [Panicum hallii]1.2e-2084.62Show/hide
Query:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAFFQ
        MGVAGVLGA L C I GA VENTLFED DG NTF AFN TQAEETYSMV ANRFWSQIFGVAFFQ
Subjt:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAFFQ

TrEMBL top hitse value%identityAlignment
A0A287Q826 Uncharacterized protein2.0e-2186.15Show/hide
Query:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAFFQ
        MGVAGVLGA L C I GA VENTLFED DG NTF AFN TQAEETYSMVTANRFWSQIFGVAFFQ
Subjt:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAFFQ

A0A2T8JD15 Uncharacterized protein5.8e-2184.62Show/hide
Query:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAFFQ
        MGVAGVLGA L C I GA VENTLFED DG NTF AFN TQAEETYSMV ANRFWSQIFGVAFFQ
Subjt:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAFFQ

A0A5A7SUQ3 Photosystem II D2 protein4.4e-2187.3Show/hide
Query:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF
        MGVAGVLGA L C I GA VENTLFED DG NTFHAFN TQAEETYSMVTANRFWSQIFGVAF
Subjt:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF

K7KJ53 Uncharacterized protein7.6e-2187.3Show/hide
Query:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF
        MGVAGVLG TL CVI GA VENTLFED DG NTF AFN TQAEETYSMVTANRFWSQIFGVAF
Subjt:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF

Q6Z1U4 Photosystem II D2 protein5.8e-2187.3Show/hide
Query:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF
        MGVAGVLGA L C ILGA VENTLFED DG NTF AFN TQAEETYSMVTANRFWSQIFGVAF
Subjt:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF

SwissProt top hitse value%identityAlignment
A1E9Z3 Photosystem II D2 protein1.0e-2285.71Show/hide
Query:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF
        MGVAGVLGA L C I GA VENTLFED DG NTF AFN TQAEETYSMVTANRFWSQIFGVAF
Subjt:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF

A4QJB0 Photosystem II D2 protein1.0e-2285.71Show/hide
Query:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF
        MGVAGVLGA L C I GA VENTLFED DG NTF AFN TQAEETYSMVTANRFWSQIFGVAF
Subjt:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF

A4QJJ4 Photosystem II D2 protein1.0e-2285.71Show/hide
Query:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF
        MGVAGVLGA L C I GA VENTLFED DG NTF AFN TQAEETYSMVTANRFWSQIFGVAF
Subjt:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF

Q3V539 Photosystem II D2 protein1.0e-2285.71Show/hide
Query:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF
        MGVAGVLGA L C I GA VENTLFED DG NTF AFN TQAEETYSMVTANRFWSQIFGVAF
Subjt:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF

Q4FFP4 Photosystem II D2 protein1.0e-2285.71Show/hide
Query:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF
        MGVAGVLGA L C I GA VENTLFED DG NTF AFN TQAEETYSMVTANRFWSQIFGVAF
Subjt:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF

Arabidopsis top hitse value%identityAlignment
ATCG00270.1 photosystem II reaction center protein D7.2e-2485.71Show/hide
Query:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF
        MGVAGVLGA L C I GA VENTLFED DG NTF AFN TQAEETYSMVTANRFWSQIFGVAF
Subjt:  MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTGCGGGTGTATTGGGCGCTACTCTGCGATGCGTTATTCTTGGTGCTATCGTAGAAAATACCTTATTTGAGGATGAGGATGGTGTAAATACATTCCATGCTTT
TAACCTAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTTCCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTTGCGGGTGTATTGGGCGCTACTCTGCGATGCGTTATTCTTGGTGCTATCGTAGAAAATACCTTATTTGAGGATGAGGATGGTGTAAATACATTCCATGCTTT
TAACCTAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTTCCAATAG
Protein sequenceShow/hide protein sequence
MGVAGVLGATLRCVILGAIVENTLFEDEDGVNTFHAFNLTQAEETYSMVTANRFWSQIFGVAFFQ