CuGenDBv2

Gene ID	Cmc02g0054481
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic
Genome location	CMiso1.1chr02:21601419..21601820
RNA-Seq Expression	Cmc02g0054481
Synteny	Cmc02g0054481
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0022900 - electron transport chain (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	IPR001268 - NADH:ubiquinone oxidoreductase, 30kDa subunit IPR037232 - NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

YP_009236283.1 NADH-plastoquinone oxidoreductase subunit J [Gynostemma pentaphyllum]

7.3e-65

90.91

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Query:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR
        TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPG LLASVYHLTRIEYGIDQP+EVCIKVFAARINPRIP VFWVWKS +F ER+SYDMLGISYDNHPR
Subjt:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR

Query:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY
        LK ILMPESWVGWPLR KDYI  NFYEIQDA+
Subjt:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY

YP_009346487.1 NADH-plastoquinone oxidoreductase subunit J [Cucumis x hytivus]

9.5e-65

90.91

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Query:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR
        TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPG LLASVYHLTRIEYGIDQP+EVCIKVFAARINPRIP VFWVWKS +F ER+SYDMLGI YDNHPR
Subjt:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR

Query:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY
        LK ILMPESWVGWPLR KDYI  NFYEIQDAY
Subjt:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY

YP_009525189.1 NADH-plastoquinone oxidoreductase subunit J [Hodgsonia macrocarpa]

7.3e-65

90.91

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Query:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR
        TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPG LLASVYHLTRIEYGIDQP+EVCIKVFAARINPRIP VFWVWKS +F ER+SYDMLGISYDNHPR
Subjt:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR

Query:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY
        LK ILMPESWVGWPLR KDYI  NFYEIQDA+
Subjt:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY

YP_009751488.1 NADH dehydrogenase subunit J [Thladiantha dubia]

5.6e-65

90.91

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Query:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR
        TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPG LLASVYHLTRIEYGIDQP+EVCIKVFAARINPRIP VFWVWKS +F ER+SYDMLGISYDNHPR
Subjt:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR

Query:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY
        LK ILMPESWVGWPLR KDYI  NFYEIQDA+
Subjt:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY

YP_009752162.1 NADH dehydrogenase subunit J [Linnaeosicyos amara]

5.6e-65

90.91

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Query:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR
        TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPG LLASVYHLTRIEYGIDQP+EVCIKVFAARINPRIP VFWVWKS++F ER+SYDMLGISYDNHPR
Subjt:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR

Query:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY
        LK ILMPESWVGWPLR KDYI  NFYEIQDA+
Subjt:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY

TrEMBL top hits

e value

%identity

Alignment

A0A109WWM6 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

3.5e-65

90.91

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Query:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR
        TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPG LLASVYHLTRIEYGIDQP+EVCIKVFAARINPRIP VFWVWKS +F ER+SYDMLGISYDNHPR
Subjt:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR

Query:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY
        LK ILMPESWVGWPLR KDYI  NFYEIQDA+
Subjt:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY

A0A2Z2CGF1 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

3.5e-65

90.91

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Query:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR
        TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPG LLASVYHLTRIEYGIDQP+EVCIKVFAARINPRIP VFWVWKS +F ER+SYDMLGISYDNHPR
Subjt:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR

Query:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY
        LK ILMPESWVGWPLR KDYI  NFYEIQDA+
Subjt:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY

A0A6H0EQB7 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

3.5e-65

90.91

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Query:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR
        TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPG LLASVYHLTRIEYGIDQP+EVCIKVFAARINPRIP VFWVWKS +F ER+SYDMLGISYDNHPR
Subjt:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR

Query:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY
        LK ILMPESWVGWPLR KDYI  NFYEIQDA+
Subjt:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY

A0A6H0ER05 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

2.7e-65

90.91

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Query:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR
        TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPG LLASVYHLTRIEYGIDQP+EVCIKVFAARINPRIP VFWVWKS +F ER+SYDMLGISYDNHPR
Subjt:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR

Query:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY
        LK ILMPESWVGWPLR KDYI  NFYEIQDA+
Subjt:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY

A0A6H0ET98 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

2.7e-65

90.91

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Query:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR
        TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPG LLASVYHLTRIEYGIDQP+EVCIKVFAARINPRIP VFWVWKS++F ER+SYDMLGISYDNHPR
Subjt:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR

Query:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY
        LK ILMPESWVGWPLR KDYI  NFYEIQDA+
Subjt:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY

SwissProt top hits

e value

%identity

Alignment

B1A938 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

5.2e-66

87.12

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Query:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR
        TLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPG LLASVYHLTRIEYG+DQP+EVCIKVFA R NPRIP VFWVWKS +F ER+SYDMLGISYDNHPR
Subjt:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR

Query:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY
        LK ILMPESW+GWPLR KDYI  NFYEIQDA+
Subjt:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY

Q09MH5 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

6.8e-66

85.61

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Query:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR
        TLQIKPE+WHS+AVILY+YGYNYLRSQCAYDVAPG LLASVYHLTRIEYG+DQP+EVCIKVFA R NP+IP VFWVWKS NF ER+SYDMLGI YDNHPR
Subjt:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR

Query:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY
        LK ILMPESW+GWPLR KDYI  NFYEIQDAY
Subjt:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY

Q0ZJ17 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

4.0e-66

87.12

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Query:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR
        TLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPG LLASVYHLTRIEYG+DQP+EVCIKVFA+R NPRIP VFWVWKS +F ER+SYDMLGISYDNHPR
Subjt:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR

Query:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY
        LK ILMPESW+GWPLR KDYI  NFYEIQDA+
Subjt:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY

Q4VZH2 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

4.7e-67

90.15

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Query:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR
        TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPG LLASVYHLTRIEYGIDQP+EVCIKVFAARINPRIP VFWVWKS +F ER+SYDMLGI YDNHPR
Subjt:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR

Query:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY
        LK ILMPESWVGWPLR KDYI  NFYEIQDA+
Subjt:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY

Q9M3M1 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

5.2e-66

87.12

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Query:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR
        TLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPG LLASVYHLTRIEYG+DQP+EVCIKVFA R NPRIP VFWVWKS +F ER+SYDM GISYDNHPR
Subjt:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR

Query:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY
        LK ILMPESW+GWPLR KDYI  NFYEIQDAY
Subjt:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY

Arabidopsis top hits

e value

%identity

Alignment

ATCG00420.1 NADH dehydrogenase subunit J

2.7e-65

84.85

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Query:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR
        TLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPG LLASVYHLTRIEYG++Q +EVCIKVF  R NPRIP VFWVWKST+F ER+SYDMLGI+YD+HPR
Subjt:  TLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPR

Query:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY
        LK ILMPESW+GWPLR KDYI  NFYEIQDAY
Subjt:  LKHILMPESWVGWPLRKKDYITLNFYEIQDAY

ATMG00070.1 NADH dehydrogenase subunit 9

2.0e-04

29.13

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Query:  YNYLRSQCAYDV------APGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPRLKHILMPESWVGWP
        + Y R Q + D+      +  R    VY+L    Y       + ++  A  +  RI  V  ++ S    ER+ +DM G+S+ NHP L+ I     + G P
Subjt:  YNYLRSQCAYDV------APGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPRLKHILMPESWVGWP

Query:  LRK
        LRK
Subjt:  LRK

Sequences

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CDS sequence

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ATGACTTTACAAATAAAGCCCGAGGAATGGCATTCTATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCAG
ACTGTTAGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCAACCGAAAGAGGTATGCATAAAAGTATTTGCTGCAAGGATAAATCCTAGAATTCCATATG
TTTTCTGGGTTTGGAAAAGTACGAATTTTCTAGAAAGGAAATCTTATGATATGTTAGGAATTTCTTATGATAATCATCCACGTCTAAAGCATATCTTAATGCCTGAAAGT
TGGGTAGGATGGCCCTTACGTAAGAAGGATTATATTACCCTAAATTTTTATGAAATACAAGATGCTTATTAA

mRNA sequence

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Protein sequence

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MTLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGRLLASVYHLTRIEYGIDQPKEVCIKVFAARINPRIPYVFWVWKSTNFLERKSYDMLGISYDNHPRLKHILMPES
WVGWPLRKKDYITLNFYEIQDAY

Cmc02g0054481 (gene) of Melon (Charmono) v1.1 genome