CuGenDBv2

Gene ID	Cmc02g0054551
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Protein Ycf2
Genome location	CMiso1.1chr02:21607882..21608730
RNA-Seq Expression	Cmc02g0054551
Synteny	Cmc02g0054551
Gene Ontology terms	GO:0009570 - chloroplast stroma (cellular component) GO:0016020 - membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	IPR008543 - Uncharacterised protein family Ycf2

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ASY96830.1 Ycf2 [Cucumis melo var. momordica]

7.6e-130

87.28

Show/hide

Query:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY
        ME VNQYRLI+NLIQIQYYGYIRNVLNRFFLMNRS RDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKG+KKWFDPLILIS+T R MNRDPNAYRY
Subjt:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY

Query:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN
        KWSNGSKNF+EHFISEQKSH HFQV                VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSL FFFV+F NI +HRSEIHIYELKGPN
Subjt:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN

Query:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD
        DQ  NQLLESIGLQIVHLKK K FLLDDHYTSQKSKFLI GGTISPFLFNKIPKWMIDSFHTRNN RKSFDNTDSYFSMISHD
Subjt:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD

Q2QD30.1 RecName: Full=Protein Ycf2 [Cucumis sativus]

6.0e-127

85.87

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Query:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY
        ME VNQYRLI+NLIQIQYY YIRNVLNRFFLMNRS RDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKG+KKWFDPLILIS+T R MNRDPNAYRY
Subjt:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY

Query:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN
        KWSNGSKNF+EHFISEQKSH HFQV                VIDKKD SKSLRFFLSKLLVFLSKFLLFLSNSL FFFV+F NI +HRSEIHIYELKGPN
Subjt:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN

Query:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD
        D+  NQLLESIGLQIVHLKK K FLLDDHYTSQKSKFLI GGTISPFLFNKIPKWMIDSF TRNN RKSFDNTDSYFSMISHD
Subjt:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD

QRW36598.1 hypothetical chloroplast RF21 [Cucumis melo]

7.6e-130

87.28

Show/hide

Query:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY
        ME VNQYRLI+NLIQIQYYGYIRNVLNRFFLMNRS RDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKG+KKWFDPLILIS+T R MNRDPNAYRY
Subjt:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY

Query:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN
        KWSNGSKNF+EHFISEQKSH HFQV                VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSL FFFV+F NI +HRSEIHIYELKGPN
Subjt:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN

Query:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD
        DQ  NQLLESIGLQIVHLKK K FLLDDHYTSQKSKFLI GGTISPFLFNKIPKWMIDSFHTRNN RKSFDNTDSYFSMISHD
Subjt:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD

YP_004841827.1 hypothetical chloroplast RF21 [Cucumis melo subsp. melo]

7.6e-130

87.28

Show/hide

Query:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY
        ME VNQYRLI+NLIQIQYYGYIRNVLNRFFLMNRS RDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKG+KKWFDPLILIS+T R MNRDPNAYRY
Subjt:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY

Query:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN
        KWSNGSKNF+EHFISEQKSH HFQV                VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSL FFFV+F NI +HRSEIHIYELKGPN
Subjt:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN

Query:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD
        DQ  NQLLESIGLQIVHLKK K FLLDDHYTSQKSKFLI GGTISPFLFNKIPKWMIDSFHTRNN RKSFDNTDSYFSMISHD
Subjt:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD

YP_009346523.1 ycf2 [Cucumis x hytivus]

5.4e-128

86.22

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Query:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY
        ME VNQYRLI+NLIQIQYY YIRNVLNRFFLMNRS RDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKG+KKWFDPLILIS+T R MNRDPNAYRY
Subjt:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY

Query:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN
        KWSNGSKNF+EHFISEQKSH HFQV                VIDKKD SKSLRFFLSKLLVFLSKFLLFLSNSL FFFV+F NI +HRSEIHIYELKGPN
Subjt:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN

Query:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD
        D+  NQLLESIGLQIVHLKK K FLLDDHYTSQKSKFLI GGTISPFLFNKIPKWMIDSFHTRNN RKSFDNTDSYFSMISHD
Subjt:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU72 Protein Ycf2

3.7e-130

87.28

Show/hide

Query:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY
        ME VNQYRLI+NLIQIQYYGYIRNVLNRFFLMNRS RDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKG+KKWFDPLILIS+T R MNRDPNAYRY
Subjt:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY

Query:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN
        KWSNGSKNF+EHFISEQKSH HFQV                VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSL FFFV+F NI +HRSEIHIYELKGPN
Subjt:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN

Query:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD
        DQ  NQLLESIGLQIVHLKK K FLLDDHYTSQKSKFLI GGTISPFLFNKIPKWMIDSFHTRNN RKSFDNTDSYFSMISHD
Subjt:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD

A0A249RYX8 Protein Ycf2

3.7e-130

87.28

Show/hide

Query:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY
        ME VNQYRLI+NLIQIQYYGYIRNVLNRFFLMNRS RDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKG+KKWFDPLILIS+T R MNRDPNAYRY
Subjt:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY

Query:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN
        KWSNGSKNF+EHFISEQKSH HFQV                VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSL FFFV+F NI +HRSEIHIYELKGPN
Subjt:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN

Query:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD
        DQ  NQLLESIGLQIVHLKK K FLLDDHYTSQKSKFLI GGTISPFLFNKIPKWMIDSFHTRNN RKSFDNTDSYFSMISHD
Subjt:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD

A0A249RZ46 Protein Ycf2

3.7e-130

87.28

Show/hide

Query:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY
        ME VNQYRLI+NLIQIQYYGYIRNVLNRFFLMNRS RDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKG+KKWFDPLILIS+T R MNRDPNAYRY
Subjt:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY

Query:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN
        KWSNGSKNF+EHFISEQKSH HFQV                VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSL FFFV+F NI +HRSEIHIYELKGPN
Subjt:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN

Query:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD
        DQ  NQLLESIGLQIVHLKK K FLLDDHYTSQKSKFLI GGTISPFLFNKIPKWMIDSFHTRNN RKSFDNTDSYFSMISHD
Subjt:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD

A0A249RZN4 Protein Ycf2

3.7e-130

87.28

Show/hide

Query:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY
        ME VNQYRLI+NLIQIQYYGYIRNVLNRFFLMNRS RDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKG+KKWFDPLILIS+T R MNRDPNAYRY
Subjt:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY

Query:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN
        KWSNGSKNF+EHFISEQKSH HFQV                VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSL FFFV+F NI +HRSEIHIYELKGPN
Subjt:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN

Query:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD
        DQ  NQLLESIGLQIVHLKK K FLLDDHYTSQKSKFLI GGTISPFLFNKIPKWMIDSFHTRNN RKSFDNTDSYFSMISHD
Subjt:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD

G3ETW1 Protein Ycf2

3.7e-130

87.28

Show/hide

Query:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY
        ME VNQYRLI+NLIQIQYYGYIRNVLNRFFLMNRS RDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKG+KKWFDPLILIS+T R MNRDPNAYRY
Subjt:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY

Query:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN
        KWSNGSKNF+EHFISEQKSH HFQV                VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSL FFFV+F NI +HRSEIHIYELKGPN
Subjt:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN

Query:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD
        DQ  NQLLESIGLQIVHLKK K FLLDDHYTSQKSKFLI GGTISPFLFNKIPKWMIDSFHTRNN RKSFDNTDSYFSMISHD
Subjt:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD

SwissProt top hits

e value

%identity

Alignment

B1A978 Protein Ycf2

3.3e-120

80.42

Show/hide

Query:  MEEVNQYRLIQNLIQIQY--YGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAY
        ME VNQYRLI+NLIQIQY  YGYIRNVLNRFFLMNRS R+ EYGIQRDQIGNDTLNHRTIMKYTINQHLSN KK +KKWFDPLI +S+T R +NRDPNAY
Subjt:  MEEVNQYRLIQNLIQIQY--YGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAY

Query:  RYKWSNGSKNFR---EHFISEQKSH--------------LHFQVVIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELK
        RYKWSNGSKNF+   EHF+SEQKS               + +  VIDKKDLSKSLRFFLSKLL+FLSK LLFLSNSL FFFV+F NI +HRSEIHIYELK
Subjt:  RYKWSNGSKNFR---EHFISEQKSH--------------LHFQVVIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELK

Query:  GPNDQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD
        GPNDQ  NQLLESIGLQIVHLKK K FLLDDH TSQKSKFLI GGTISPFLFNKIPKWMIDSFHTR N RKSFDNTDSYFSMISHD
Subjt:  GPNDQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD

Q09WV7 Protein Ycf2

3.7e-119

80.77

Show/hide

Query:  MEEVNQYRLIQNLIQIQY--YGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAY
        ME VNQYRLI+NLIQIQY  YGYIRNVLNRF LMNRS R+ EYGIQRDQIGNDTLNHRTIMKYTINQHLSN KK +KKWFDPLI IS+T R MNRDPNAY
Subjt:  MEEVNQYRLIQNLIQIQY--YGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAY

Query:  RYKWSNGSKNFR---EHFISEQKSH--------------LHFQVVIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELK
        RYKWSNGSKN +   EHFISEQKS               + +  VIDKKDLSKSL FFLSKLL+FLSKFLLFLSNSL FFFV+F NI +HRSEIHIYELK
Subjt:  RYKWSNGSKNFR---EHFISEQKSH--------------LHFQVVIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELK

Query:  GPNDQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD
        GPNDQ  NQLLESIGLQIVHLKK K FLLDDH TSQKSKFLI GGTISPFLFNKIPKWMIDSFHTR N RKSFDNTDSYFSMISHD
Subjt:  GPNDQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD

Q0ZIV6 Protein Ycf2

3.1e-118

79.72

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Query:  MEEVNQYRLIQNLIQIQY--YGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAY
        ME VNQY LI+NLIQIQY  YGYIRNVLNRFFLMNRS R+ EYGIQRDQIGNDTLNHRTIMKYTINQHLSN KK +KKWFDPLI IS+T R MNRDP+AY
Subjt:  MEEVNQYRLIQNLIQIQY--YGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAY

Query:  RYKWSNGSKNFR---EHFISEQKSH--------------LHFQVVIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELK
        RYKWSNGSKNF+   EHF+SEQKS               + +  VIDKKDLSKSLRFFLSK L+FLSK LLFLSNSL FFFV+F NI +HRSEIHIYELK
Subjt:  RYKWSNGSKNFR---EHFISEQKSH--------------LHFQVVIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELK

Query:  GPNDQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD
        GPNDQ  NQLLESIGLQI+HLKK K FLLDDH TSQKSKFLI GGTISPFLFNKIPKWMIDSFH+RNN RKSFDNTDSYFSMISHD
Subjt:  GPNDQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD

Q14F97 Protein Ycf2

1.2e-117

78.95

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Query:  MEEVNQYRLIQNLIQIQY--YGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAY
        ME VNQY LI+NLIQIQY  YGYIRNVLN+FFLMNRS R+ EYGIQ+DQIGNDTLNHRT+MKYTINQHLSN K+ +KKWFDPLI +S+T R MN DPN+Y
Subjt:  MEEVNQYRLIQNLIQIQY--YGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAY

Query:  RYKWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKG
        RYKWSNGS NF+EHFISEQKS   FQV                VIDKKDLSKSL FFLSKLL+FLSKF+LFLSNSL FFFV+F NI +HRSEIHIYELKG
Subjt:  RYKWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKG

Query:  PNDQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD
        PNDQ  NQLLE IGLQIVHLKK K FLLDDH TSQKSKFLI GGTISPFLFNKIPKWMIDSFHTRNN RKSFDNTDS FSMISHD
Subjt:  PNDQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD

Q2QD30 Protein Ycf2

7.8e-130

85.87

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Query:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY
        ME VNQYRLI+NLIQIQYY YIRNVLNRFFLMNRS RDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKG+KKWFDPLILIS+T R MNRDPNAYRY
Subjt:  MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPNAYRY

Query:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN
        KWSNGSKNF+EHFISEQKSH HFQV                VIDKKD SKSLRFFLSKLLVFLSKFLLFLSNSL FFFV+F NI +HRSEIHIYELKGPN
Subjt:  KWSNGSKNFREHFISEQKSHLHFQV----------------VIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPN

Query:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD
        D+  NQLLESIGLQIVHLKK K FLLDDHYTSQKSKFLI GGTISPFLFNKIPKWMIDSF TRNN RKSFDNTDSYFSMISHD
Subjt:  DQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD

Arabidopsis top hits

e value

%identity

Alignment

ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core

5.2e-113

74.75

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Query:  MEEVNQYRLIQNLIQIQY----YGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPN
        ME VNQYRLI+N+IQIQ+    YGYIRNVLNRFFLM R  R+ EYGIQRD IGNDTLNHRTIMK TINQHLSN KK +KKWFDPLI +SQT R +NRDPN
Subjt:  MEEVNQYRLIQNLIQIQY----YGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPN

Query:  AYRYKWSNGSKNFR---EHFISEQKSH--------------LHFQVVIDKKDLSKS--------LRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVH
        AYRYKWSNGSKNF+   EHF+SE+KS               + +  VIDKKDLSKS        LRFFLSKLL+FLSK LLFLSNSL FFFV+F NI +H
Subjt:  AYRYKWSNGSKNFR---EHFISEQKSH--------------LHFQVVIDKKDLSKS--------LRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVH

Query:  RSEIHIYELKGPNDQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDS-YFSMISHD
        RSEIHIYELKGPNDQ  NQLLESIGLQIVHLKK K FLLDDH TSQKSKFLI GGTISPFLFNKIPKWMIDSFHTR N RKSFDNTDS YFS++SHD
Subjt:  RSEIHIYELKGPNDQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDS-YFSMISHD

ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core

5.2e-113

74.75

Show/hide

Query:  MEEVNQYRLIQNLIQIQY----YGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPN
        ME VNQYRLI+N+IQIQ+    YGYIRNVLNRFFLM R  R+ EYGIQRD IGNDTLNHRTIMK TINQHLSN KK +KKWFDPLI +SQT R +NRDPN
Subjt:  MEEVNQYRLIQNLIQIQY----YGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQT-RFMNRDPN

Query:  AYRYKWSNGSKNFR---EHFISEQKSH--------------LHFQVVIDKKDLSKS--------LRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVH
        AYRYKWSNGSKNF+   EHF+SE+KS               + +  VIDKKDLSKS        LRFFLSKLL+FLSK LLFLSNSL FFFV+F NI +H
Subjt:  AYRYKWSNGSKNFR---EHFISEQKSH--------------LHFQVVIDKKDLSKS--------LRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVH

Query:  RSEIHIYELKGPNDQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDS-YFSMISHD
        RSEIHIYELKGPNDQ  NQLLESIGLQIVHLKK K FLLDDH TSQKSKFLI GGTISPFLFNKIPKWMIDSFHTR N RKSFDNTDS YFS++SHD
Subjt:  RSEIHIYELKGPNDQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKFLIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDS-YFSMISHD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGAAGTCAATCAATATAGATTGATTCAAAATCTAATTCAAATCCAATATTATGGGTACATAAGAAATGTATTGAATCGATTCTTTTTAATGAATAGATCTGGTCG
CGACTTGGAATATGGAATTCAAAGGGATCAAATAGGAAATGATACTCTGAATCATAGAACTATAATGAAATATACGATTAACCAACATTTATCAAATTTCAAAAAGGGTA
AGAAAAAATGGTTCGATCCTCTTATTTTGATTTCTCAAACCAGATTCATGAATCGGGATCCTAATGCATATAGATACAAATGGTCCAATGGGAGCAAGAATTTTCGGGAA
CATTTCATTTCTGAGCAAAAGAGCCATTTGCATTTTCAAGTAGTTATCGATAAAAAAGATTTGTCTAAGTCACTTCGTTTCTTTTTGTCCAAGTTACTTGTTTTTTTGTC
CAAGTTTCTTCTCTTTTTGTCTAACTCACTTCTTTTTTTCTTTGTGAATTTCAGGAATATCCTCGTTCATAGGTCCGAGATCCACATCTATGAATTGAAAGGTCCGAATG
ATCAATTCGGCAATCAGTTGTTAGAATCAATAGGTCTTCAAATCGTTCATTTGAAAAAATCGAAATCCTTCTTATTGGATGATCATTATACTTCCCAAAAATCGAAATTT
TTGATCTATGGAGGAACAATATCACCATTTTTGTTCAATAAGATACCAAAGTGGATGATCGACTCATTCCATACTAGAAATAATCTCAGAAAATCCTTTGATAACACAGA
TTCCTATTTCTCAATGATATCCCATGATTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEEVNQYRLIQNLIQIQYYGYIRNVLNRFFLMNRSGRDLEYGIQRDQIGNDTLNHRTIMKYTINQHLSNFKKGKKKWFDPLILISQTRFMNRDPNAYRYKWSNGSKNFRE
HFISEQKSHLHFQVVIDKKDLSKSLRFFLSKLLVFLSKFLLFLSNSLLFFFVNFRNILVHRSEIHIYELKGPNDQFGNQLLESIGLQIVHLKKSKSFLLDDHYTSQKSKF
LIYGGTISPFLFNKIPKWMIDSFHTRNNLRKSFDNTDSYFSMISHD

Cmc02g0054551 (gene) of Melon (Charmono) v1.1 genome