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Cmc02g0056541 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0056541
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionLYR motif-containing protein 4
Genome locationCMiso1.1chr02:22886703..22886975
RNA-Seq ExpressionCmc02g0056541
SyntenyCmc02g0056541
Gene Ontology termsGO:0016226 - iron-sulfur cluster assembly (biological process)
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453246.1 PREDICTED: LYR motif-containing protein 4 [Cucumis melo]7.1e-40100Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN
        MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN

XP_011660289.1 LYR motif-containing protein 4 [Cucumis sativus]8.2e-3691.11Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN
        MA+PTRSEALSLLRSLIRT+R F DYNIREYAKRR VDGFRHNRNLSDP SISSAYADGKAQLEVAKRQSA+YSLY PKVKSIMEAHRIN
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN

XP_022134602.1 LYR motif-containing protein 4-like [Momordica charantia]8.5e-3381.11Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN
        MA PTR+EALSLLRSL+RT+R FCDYN+REYAKRR VDGFRHNRNLSDPSSISSAYADG+AQLEVA+RQS +YS +APKVKSIM+ H  N
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN

XP_022932898.1 LYR motif-containing protein 4 [Cucurbita moschata]1.7e-3384.44Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN
        MA PTRSE+LSLLRSL+RT+R FCDYNIREYAKRR VDGFRHNRNLSDPSSI  AYADGKAQLEVAKRQS +YSL++PKVKSIMEAH  N
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN

XP_038879775.1 LYR motif-containing protein 4-like [Benincasa hispida]1.8e-3588.89Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN
        M APTRSEALSLLRS +RT+R FCDYNIREYAKRR VDGFRHNRNLSDP SISSAYADGKAQLEVAKRQSA+YSLYAPKVKSIME HR N
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN

TrEMBL top hitse value%identityAlignment
A0A0A0LPH2 Uncharacterized protein4.0e-3691.11Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN
        MA+PTRSEALSLLRSLIRT+R F DYNIREYAKRR VDGFRHNRNLSDP SISSAYADGKAQLEVAKRQSA+YSLY PKVKSIMEAHRIN
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN

A0A1S3BV74 LYR motif-containing protein 43.5e-40100Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN
        MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN

A0A5A7UTC8 LYR motif-containing protein 43.5e-40100Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN
        MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN

A0A6J1F322 LYR motif-containing protein 48.2e-3484.44Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN
        MA PTRSE+LSLLRSL+RT+R FCDYNIREYAKRR VDGFRHNRNLSDPSSI  AYADGKAQLEVAKRQS +YSL++PKVKSIMEAH  N
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN

A0A6J1IC29 LYR motif-containing protein 48.2e-3484.44Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN
        MA PTRSE+LSLLRSL+RT+R FCDYNIREYAKRR VDGFRHNRNLSDPSSI  AYADGKAQLEVAKRQS +YSL++PKVKSIMEAH  N
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN

SwissProt top hitse value%identityAlignment
B5FZA8 LYR motif-containing protein 47.2e-1144.71Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIME
        MAA +R++ L L R+L+R S++F  YN R YA RR+ D FR N+N++D   I       KA LEV +RQ  I  +YA + K I+E
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIME

B5XD90 LYR motif-containing protein 4B5.2e-0943.53Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIME
        MAA T ++ LSL R L++ S +F  YN R YA RRV D FR NR++ DP  +      G+  L++ +RQ AI  +Y P  K+I+E
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIME

Q0VCG0 LYR motif-containing protein 48.8e-0940.26Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYA
        MAA +R++ L L R+++R S++F  YN R YA RR+ D FR N+N+ DP  I +     K  L + +RQ  I  +Y+
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYA

Q8K215 LYR motif-containing protein 48.0e-1042.86Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYA
        MAA +R++ L L R+++R S+ F  YN R YA RR+ D FR N+N+ DP  I +     K  LE+ +RQ  I  LY+
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYA

Q9HD34 LYR motif-containing protein 46.1e-1044.16Show/hide
Query:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYA
        MAA +R++ LSL R+++R S++F  YN R YA RR+ D FR N+N+ DP  I +     K  L V +RQ  I  LY+
Subjt:  MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYA

Arabidopsis top hitse value%identityAlignment
AT5G61220.1 LYR family of Fe/S cluster biogenesis protein6.1e-2160.76Show/hide
Query:  SEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIME
        SE LSL R+L+R  RQF DYNIREY+KRR +DGFR N+NL+DPS ++ AYA+ K QL VA+R   +Y  Y PK K+IME
Subjt:  SEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCCAACAAGATCGGAGGCTCTTTCGCTTCTCCGCTCTCTGATCCGTACATCCCGTCAGTTCTGCGATTACAACATCAGAGAGTACGCCAAACGACGCGTCGT
CGATGGCTTCCGCCATAACCGAAACCTTTCCGACCCTTCATCCATTTCCTCCGCCTACGCCGATGGAAAGGCTCAGCTTGAAGTTGCTAAAAGACAGTCAGCCATTTACT
CCCTCTATGCGCCGAAGGTAAAGAGCATCATGGAGGCTCATCGCATAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTCCAACAAGATCGGAGGCTCTTTCGCTTCTCCGCTCTCTGATCCGTACATCCCGTCAGTTCTGCGATTACAACATCAGAGAGTACGCCAAACGACGCGTCGT
CGATGGCTTCCGCCATAACCGAAACCTTTCCGACCCTTCATCCATTTCCTCCGCCTACGCCGATGGAAAGGCTCAGCTTGAAGTTGCTAAAAGACAGTCAGCCATTTACT
CCCTCTATGCGCCGAAGGTAAAGAGCATCATGGAGGCTCATCGCATAAACTGA
Protein sequenceShow/hide protein sequence
MAAPTRSEALSLLRSLIRTSRQFCDYNIREYAKRRVVDGFRHNRNLSDPSSISSAYADGKAQLEVAKRQSAIYSLYAPKVKSIMEAHRIN