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Cmc02g0056661 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0056661
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionmitochondrial import inner membrane translocase subunit PAM16 like 2-like
Genome locationCMiso1.1chr02:22962794..22966951
RNA-Seq ExpressionCmc02g0056661
SyntenyCmc02g0056661
Gene Ontology termsGO:0030150 - protein import into mitochondrial matrix (biological process)
GO:0005744 - TIM23 mitochondrial import inner membrane translocase complex (cellular component)
InterPro domainsIPR005341 - Mitochondrial import inner membrane translocase subunit Tim16
IPR036869 - Chaperone J-domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057966.1 mitochondrial import inner membrane translocase subunit Tim16-like isoform X2 [Cucumis melo var. makuwa]2.0e-3897.73Show/hide
Query:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS
        ++DASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS
Subjt:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS

XP_008453226.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16-like isoform X1 [Cucumis melo]2.6e-3897.73Show/hide
Query:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS
        L++ASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS
Subjt:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS

XP_011660201.1 mitochondrial import inner membrane translocase subunit PAM16 like 2 [Cucumis sativus]1.8e-3489.77Show/hide
Query:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS
        +++AS SGVAQETI+NTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYD+LFERNAQTGSFYLQSKVHRAKERLETL+HSK QD PS
Subjt:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS

XP_016901365.1 PREDICTED: mitochondrial import inner membrane translocase subunit Tim16-like isoform X2 [Cucumis melo]1.9e-49100Show/hide
Query:  MAWMIAYCSANIWSPLKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQD
        MAWMIAYCSANIWSPLKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQD
Subjt:  MAWMIAYCSANIWSPLKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQD

Query:  VPS
        VPS
Subjt:  VPS

XP_022155245.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Momordica charantia]6.1e-3592.05Show/hide
Query:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS
        L +ASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEE PWEEIVKKYD+LFERNAQ GSFYLQSKVHRAKERLETLY SKDQD PS
Subjt:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS

TrEMBL top hitse value%identityAlignment
A0A0A0LSD2 Uncharacterized protein8.5e-3589.77Show/hide
Query:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS
        +++AS SGVAQETI+NTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYD+LFERNAQTGSFYLQSKVHRAKERLETL+HSK QD PS
Subjt:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS

A0A1S3BV59 mitochondrial import inner membrane translocase subunit tim16-like isoform X11.3e-3897.73Show/hide
Query:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS
        L++ASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS
Subjt:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS

A0A1S4E056 mitochondrial import inner membrane translocase subunit Tim16-like isoform X29.4e-50100Show/hide
Query:  MAWMIAYCSANIWSPLKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQD
        MAWMIAYCSANIWSPLKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQD
Subjt:  MAWMIAYCSANIWSPLKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQD

Query:  VPS
        VPS
Subjt:  VPS

A0A5A7UUY0 Mitochondrial import inner membrane translocase subunit Tim16-like isoform X29.7e-3997.73Show/hide
Query:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS
        ++DASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS
Subjt:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS

A0A6J1DR54 mitochondrial import inner membrane translocase subunit PAM16 like 2-like2.9e-3592.05Show/hide
Query:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS
        L +ASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEE PWEEIVKKYD+LFERNAQ GSFYLQSKVHRAKERLETLY SKDQD PS
Subjt:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS

SwissProt top hitse value%identityAlignment
Q5M995 Mitochondrial import inner membrane translocase subunit tim16-B1.4e-0562.75Show/hide
Query:  QEARQILGVTEEMPWEEIVKKYDSLFERN--AQTGSFYLQSKVHRAKERLE
        QEA+QIL V++  P EEI K Y+ LF+ N  A  GSFYLQSKV RAKERL+
Subjt:  QEARQILGVTEEMPWEEIVKKYDSLFERN--AQTGSFYLQSKVHRAKERLE

Q6PBL0 Mitochondrial import inner membrane translocase subunit tim161.0e-0559.26Show/hide
Query:  MTEQEARQILGVTEEMPWEEIVKKYDSLFERN--AQTGSFYLQSKVHRAKERLE
        MT QEA+QIL ++   P EEI K Y+ LF+ N  A  GSFY+QSKV RAKERL+
Subjt:  MTEQEARQILGVTEEMPWEEIVKKYDSLFERN--AQTGSFYLQSKVHRAKERLE

Q93VV9 Mitochondrial import inner membrane translocase subunit PAM16 like 22.4e-2669.32Show/hide
Query:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS
        L +ASKSGVAQE +QN VR+A K +TEQEARQILGVTE+  WEEI++KYD LFE NA+ GSFYLQSKVHRAKE LE +Y S+    PS
Subjt:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS

Q93W66 Mitochondrial import inner membrane translocase subunit PAM16 like 13.4e-2063.22Show/hide
Query:  CSANIWSPLKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLY
        C+      L +ASK+GVA E  Q T++R   +  E EARQILGVTE+  W+EI+KKYD+LFERNAQ GSFYLQSKVHRAKE LET Y
Subjt:  CSANIWSPLKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLY

Q9VF08 Mitochondrial import inner membrane translocase subunit Tim161.8e-0550Show/hide
Query:  MTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQT--GSFYLQSKVHRAKERLE
        MT +EA+QIL + +    + I K Y+ LF+ N ++  GSFY+QSKV RAKERL+
Subjt:  MTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQT--GSFYLQSKVHRAKERLE

Arabidopsis top hitse value%identityAlignment
AT3G59280.1 Protein Transporter, Pam161.7e-2769.32Show/hide
Query:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS
        L +ASKSGVAQE +QN VR+A K +TEQEARQILGVTE+  WEEI++KYD LFE NA+ GSFYLQSKVHRAKE LE +Y S+    PS
Subjt:  LKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS

AT5G61880.1 Protein Transporter, Pam162.4e-2163.22Show/hide
Query:  CSANIWSPLKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLY
        C+      L +ASK+GVA E  Q T++R   +  E EARQILGVTE+  W+EI+KKYD+LFERNAQ GSFYLQSKVHRAKE LET Y
Subjt:  CSANIWSPLKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLY

AT5G61880.2 Protein Transporter, Pam162.4e-2163.22Show/hide
Query:  CSANIWSPLKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLY
        C+      L +ASK+GVA E  Q T++R   +  E EARQILGVTE+  W+EI+KKYD+LFERNAQ GSFYLQSKVHRAKE LET Y
Subjt:  CSANIWSPLKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGGATGATAGCGTACTGCAGTGCCAACATTTGGTCACCCTTGAAAGATGCTTCAAAGTCCGGTGTTGCTCAAGAAACTATACAAAACACTGTTCGTAGAGCAAG
CAAAGTGATGACAGAGCAAGAAGCCAGGCAGATTCTTGGCGTCACCGAAGAAATGCCTTGGGAGGAAATTGTGAAGAAATATGATTCTTTGTTTGAAAGAAATGCTCAAA
CTGGAAGCTTTTATCTTCAGTCAAAAGTCCATAGAGCCAAAGAACGATTAGAAACTCTCTATCATAGCAAGGATCAGGATGTCCCTAGCTGA
mRNA sequenceShow/hide mRNA sequence
TTTATACATATCACTAATAATTCTTAGTTAGAAATATATTTTAAGAGATTTGGTTATATTTGTTTTTATGAAAAAAATTGCTATATAACATAGAAATGGAAGATAGAGCA
AAAGTAGAATCCAACATAGAGAGAGGAACTTCGTATTAGAAAATTGTAATTAATTCTTGAATTTTGGGAAAAGGAATTTATTCAAACCTTTCTTGTTAACCAAGAATTTT
CTTTTTTACATAAAAGAGCGAAAAGTGGAAGGAAAAAGAAAATAGGAAAGGACAAGGAAAAAAAAGGAAAGAACCTCTTACCCTTGTTGCCGCCACCCCCTTGCTTAATC
TCGTTCGCCGGCGATCACAGGCCACGAGCGGCGAGCCTCCGAACAGCGGCGTCGGCGGCTTACAGACTTCGGCCTTCGGCGACTCATTTTTCGCAAACTCACCCACCAAT
CTAACGTGCAACGTGAGCACGACTTCGAACGGCTTTTCCTACGCCATTGCAGCATTTTTCTCTCCGTTTTGAAAAGATTCGACGTTGACCCACATTCCGATTGAACTCAA
GTCAGTTTCCCATAACCAACAAGTTCGGACGTTTTCGAACACCAGCCAGCAAGAATCGCAGCCATTTCGCTCTAGCGGCTTTAACGATTCCATACCTATTGTCAAGGCCA
GCCAGTTAATCATGGCTGCAAAAGTTCTTGCCCATTTAATTGTTTCGGGCTCTGTGATAATTGGGAGGGCCATTGCTCAAGCCTACCAACAAGCCCTTCGAACTATAAAA
GCCTTTTGAGTGTTCATGGCCTGGATGATAGCGTACTGCAGTGCCAACATTTGGTCACCCTTGAAAGATGCTTCAAAGTCCGGTGTTGCTCAAGAAACTATACAAAACAC
TGTTCGTAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCCAGGCAGATTCTTGGCGTCACCGAAGAAATGCCTTGGGAGGAAATTGTGAAGAAATATGATTCTTTGTTTG
AAAGAAATGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAAGTCCATAGAGCCAAAGAACGATTAGAAACTCTCTATCATAGCAAGGATCAGGATGTCCCTAGCTGAGTG
TCCCGAGGAATCTATTATGTTCTTCACATTTTTACTGATTTTGTATAATTTTTGTTTTAATTTCAATTTTGTTGATGATGTCTAACATGAATGATGAAATTGATGTCGAA
CTCTTTACTCTTACATATCATTTTTGTTCTAATAAGTAAATCATCATTTGTGCAATTGCATATATGACAATCGTTAATTTGCACACATTTCTAACCGAGGACCTATTAAC
GATAGATTTCTATTATCGATGGATCTATAACAAATCAAATTGATAGTTTGTTTACTTCCTTTTTCTTTATTAATATAAGATTAATATAGTTTATAAGAATCATCTTGTTT
TATTTT
Protein sequenceShow/hide protein sequence
MAWMIAYCSANIWSPLKDASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS