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Cmc02g0056671 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0056671
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionHNH domain-containing protein
Genome locationCMiso1.1chr02:22967193..22969216
RNA-Seq ExpressionCmc02g0056671
SyntenyCmc02g0056671
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsIPR003615 - HNH nuclease


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138181.1 uncharacterized protein LOC101204599 [Cucumis sativus]7.1e-6899.22Show/hide
Query:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL
        MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKG GESTADNCQIL
Subjt:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL

Query:  QTRVNRFKSNKDDVDTSELKGYSCDVKFT
        QTRVNRFKSNKDDVDTSELKGYSCDVKFT
Subjt:  QTRVNRFKSNKDDVDTSELKGYSCDVKFT

XP_008453223.1 PREDICTED: uncharacterized protein LOC103494011 isoform X1 [Cucumis melo]4.9e-6998.48Show/hide
Query:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL
        MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKG GESTADNCQIL
Subjt:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL

Query:  QTRVNRFKSNKDDVDTSELKGYSCDVKFTGHL
        QTRVNRFKSNKDDVDTSELKGYSCDVKFTG L
Subjt:  QTRVNRFKSNKDDVDTSELKGYSCDVKFTGHL

XP_008453224.1 PREDICTED: uncharacterized protein LOC103494011 isoform X2 [Cucumis melo]7.1e-6899.22Show/hide
Query:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL
        MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKG GESTADNCQIL
Subjt:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL

Query:  QTRVNRFKSNKDDVDTSELKGYSCDVKFT
        QTRVNRFKSNKDDVDTSELKGYSCDVKFT
Subjt:  QTRVNRFKSNKDDVDTSELKGYSCDVKFT

XP_023531696.1 uncharacterized protein LOC111793864 [Cucurbita pepo subsp. pepo]1.5e-6291.47Show/hide
Query:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL
        MEATSSSPSPTRSRGG R SGSG+G+ERPRFFD KAKA CWAKAD VPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVP+SKG GESTADNCQIL
Subjt:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL

Query:  QTRVNRFKSNKDDVDTSELKGYSCDVKFT
        QTRVNRFKS+KDDVDTS+LKGYSCDVKFT
Subjt:  QTRVNRFKSNKDDVDTSELKGYSCDVKFT

XP_038878253.1 uncharacterized protein LOC120070538 [Benincasa hispida]1.4e-6393.02Show/hide
Query:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL
        MEATSSSPSPTRSRGG R SGSGSGDERPRFFD KAKA CW KADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKG GESTADNCQIL
Subjt:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL

Query:  QTRVNRFKSNKDDVDTSELKGYSCDVKFT
        QTRVNRFKSN++DVDTSELKGYSCD+KFT
Subjt:  QTRVNRFKSNKDDVDTSELKGYSCDVKFT

TrEMBL top hitse value%identityAlignment
A0A0A0LUK3 HNHc domain-containing protein3.4e-6899.22Show/hide
Query:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL
        MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKG GESTADNCQIL
Subjt:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL

Query:  QTRVNRFKSNKDDVDTSELKGYSCDVKFT
        QTRVNRFKSNKDDVDTSELKGYSCDVKFT
Subjt:  QTRVNRFKSNKDDVDTSELKGYSCDVKFT

A0A1S3BVP6 uncharacterized protein LOC103494011 isoform X23.4e-6899.22Show/hide
Query:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL
        MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKG GESTADNCQIL
Subjt:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL

Query:  QTRVNRFKSNKDDVDTSELKGYSCDVKFT
        QTRVNRFKSNKDDVDTSELKGYSCDVKFT
Subjt:  QTRVNRFKSNKDDVDTSELKGYSCDVKFT

A0A1S3BVR0 uncharacterized protein LOC103494011 isoform X12.4e-6998.48Show/hide
Query:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL
        MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKG GESTADNCQIL
Subjt:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL

Query:  QTRVNRFKSNKDDVDTSELKGYSCDVKFTGHL
        QTRVNRFKSNKDDVDTSELKGYSCDVKFTG L
Subjt:  QTRVNRFKSNKDDVDTSELKGYSCDVKFTGHL

A0A5A7UWI1 HNH endonuclease3.4e-6899.22Show/hide
Query:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL
        MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKG GESTADNCQIL
Subjt:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL

Query:  QTRVNRFKSNKDDVDTSELKGYSCDVKFT
        QTRVNRFKSNKDDVDTSELKGYSCDVKFT
Subjt:  QTRVNRFKSNKDDVDTSELKGYSCDVKFT

A0A6J1I7G1 uncharacterized protein LOC1114715097.4e-6391.47Show/hide
Query:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL
        MEATSSSPSPTRSRGG R SGSG+G+ERPRFFD KAKA CWAKAD VPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVP+SKG GESTADNCQIL
Subjt:  MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQIL

Query:  QTRVNRFKSNKDDVDTSELKGYSCDVKFT
        QTRVNRFKS+KDDVDTS+LKGYSCDVKFT
Subjt:  QTRVNRFKSNKDDVDTSELKGYSCDVKFT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G18680.1 HNH endonuclease domain-containing protein5.7e-4768.85Show/hide
Query:  PSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQILQTRVNRF
        P P+      R +   +G+ERPRFFD KAK  CWA AD+VPGRHPERWRKD AGN+VCKRF NC GCLCFEYDHIVPYSKG GES A+NCQILQTRVNRF
Subjt:  PSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQILQTRVNRF

Query:  KSNKDDVDTSELKGYSCDVKFT
        KS +++VD + LK YSC ++FT
Subjt:  KSNKDDVDTSELKGYSCDVKFT

AT3G47490.1 HNH endonuclease1.2e-2855Show/hide
Query:  SGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQILQTRVNRFKSNKDDVDTSEL
        SG G  +  PR F    K  CW KA+ + GR PERWR+D  GN+V ++   C GCLC +YDHIVPYSKG G+ST +NCQ+LQ +VNR K NK D+  SEL
Subjt:  SGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQILQTRVNRFKSNKDDVDTSEL

AT3G47490.2 HNH endonuclease9.4e-1852.94Show/hide
Query:  SGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSK
        SG G  +  PR F    K  CW KA+ + GR PERWR+D  GN+V ++   C GCLC +YDHIVPYSK
Subjt:  SGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSK

AT3G47490.3 HNH endonuclease1.2e-2545.38Show/hide
Query:  SGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGR-------------------GESTADNCQIL
        SG G  +  PR F    K  CW KA+ + GR PERWR+D  GN+V ++   C GCLC +YDHIVPYSK                     G+ST +NCQ+L
Subjt:  SGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGR-------------------GESTADNCQIL

Query:  QTRVNRFKSNKDDVDTSEL
        Q +VNR K NK D+  SEL
Subjt:  QTRVNRFKSNKDDVDTSEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTACTTCTAGTTCGCCGTCACCGACTCGTTCCCGCGGCGGACAAAGAGACAGTGGCTCCGGAAGTGGGGACGAACGGCCTAGATTTTTCGACGCAAAAGCGAA
AGCTAGTTGTTGGGCTAAGGCGGATGTTGTCCCTGGCCGGCATCCCGAGCGTTGGCGTAAGGACGCCGCTGGTAATGTCGTCTGTAAGCGCTTCTGTAACTGCCAGGGCT
GCCTCTGCTTTGAGTATGATCACATTGTCCCTTACTCCAAAGGTAGAGGCGAATCCACGGCGGATAATTGCCAGATTCTTCAGACGAGAGTAAACAGATTCAAATCGAAC
AAAGACGATGTTGATACGTCTGAGTTGAAAGGCTATTCGTGTGATGTCAAGTTTACTGGTCATCTGAAACTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
GGTTTCTTCCGTTTCTGTCTGCTGGACGGCGTCCCGACTCCGATGGAAGCTACTTCTAGTTCGCCGTCACCGACTCGTTCCCGCGGCGGACAAAGAGACAGTGGCTCCGG
AAGTGGGGACGAACGGCCTAGATTTTTCGACGCAAAAGCGAAAGCTAGTTGTTGGGCTAAGGCGGATGTTGTCCCTGGCCGGCATCCCGAGCGTTGGCGTAAGGACGCCG
CTGGTAATGTCGTCTGTAAGCGCTTCTGTAACTGCCAGGGCTGCCTCTGCTTTGAGTATGATCACATTGTCCCTTACTCCAAAGGTAGAGGCGAATCCACGGCGGATAAT
TGCCAGATTCTTCAGACGAGAGTAAACAGATTCAAATCGAACAAAGACGATGTTGATACGTCTGAGTTGAAAGGCTATTCGTGTGATGTCAAGTTTACTGGTCATCTGAA
ACTCAAGTGAAGAATCTCCATAGGCTGCTGTCCAGAACTTCCAACTATAAACTCTGCTTGAGGTTATGAATTCTAATTTCTTATGAAAATTTCATTAAATGAACCATCAT
GGGTTAGCGGTAAAAAGAAGGCATGGTCTCACTAACTAAGAGTTCATAGGTTTAACCCATGGTGGCCAACTCATAGACACTCACGATATAAAATAAAAAATAAGAAATTT
CGCTAAATGATGTAGTGTAATTAAATTGTCGTGCATAAGCAGAACAGAGCACTCTCTGTGTATAAAGATCAACACCTAAAATTGGACTAATGTTCTGACTTGGAATTCTT
CAAGGAACTTATGGATTACCTCTTAGTTCGTTGTCCTTTTCCCTTTAAAACCTGCTTTATGCATCTCATTTGATCTCACAAGTGAATCACTTTGTTACCAACCCACCTAA
GAAACTCCTTTGACATTCTTTTTATATAGAAACTATGAGAGAAAATATGAAAGAATATAAGGACGTACAAAATAAACCAAGCCTCCACCTACTAAAAAAATATTCAGCTA
AGTAAAATGTGCATAAAGAACAATTACAAAAGGTGTTTGAAATCGAAGGTTAAACATCACTTGGATATCTCTCCTCCACCTCTCTAAACACAGTTATTTCTCTCCCTCGT
AAATCCTACATTTAATCGCACACTCAGCATCTCAAAGAAAGCAATCATTCTCACCAAAAGACTAATGGAGAACACACTCCCCTATCCAACCACTAACACTTAACCTAAGT
GGATGGCTACCCTGAATTGAACTTATTTTATTTAAC
Protein sequenceShow/hide protein sequence
MEATSSSPSPTRSRGGQRDSGSGSGDERPRFFDAKAKASCWAKADVVPGRHPERWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPYSKGRGESTADNCQILQTRVNRFKSN
KDDVDTSELKGYSCDVKFTGHLKLK