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Cmc02g0058041 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0058041
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionNADH dehydrogenase subunit 3
Genome locationCMiso1.1chr02:23739722..23740036
RNA-Seq ExpressionCmc02g0058041
SyntenyCmc02g0058041
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0031966 - mitochondrial membrane (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsIPR000440 - NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
IPR038430 - NADH:ubiquinone oxidoreductase, subunit 3 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAM15514.1 hypothetical protein [Arabidopsis thaliana]9.8e-2570.3Show/hide
Query:  VSGWAFSS-FLFRYAAPR-SRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSL
        +SGWAF+S F+FRYAA   +RSE  KWAV+MSEFAPI IYL+ISLLVSLI LG+PF FASNSSTY EKLSAYECGFDPS DARS F        FYL+S+
Subjt:  VSGWAFSS-FLFRYAAPR-SRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSL

Query:  I
        +
Subjt:  I

CAB4075863.1 unnamed protein product [Lactuca saligna]1.3e-2474.16Show/hide
Query:  FRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI
        FRYAAPR+RSE  KWAVVMSEFAPI+IYL+IS LVSLIPLG+PF FASNSSTY EKLSAYECGFDP  DARS F        FYL+S++
Subjt:  FRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI

CBI18825.3 unnamed protein product, partial [Vitis vinifera]3.7e-2475Show/hide
Query:  CGVS--GWAFSS-FLFRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSH
        CG S  GW  SS   FRY A R+RSE  KWA+VMSEFAPI IYL+IS LVSLIPLG+PF FASNSSTY EKLSAYECGFDP  DARSH
Subjt:  CGVS--GWAFSS-FLFRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSH

KAA0065512.1 ribosomal protein S12C [Cucumis melo var. makuwa]3.0e-2673.68Show/hide
Query:  AFSSFLFRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI
        +  +FLFRYAAPRSRSE  KWAVVMSEFAPI IYL+IS LVSLIPLGLPF FASNS+TY EKLSAYECGFDPS DARS F        FYL+S++
Subjt:  AFSSFLFRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI

KAG7025767.1 NADH-ubiquinone oxidoreductase chain 3, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-2977Show/hide
Query:  VSGWAFSSFLFRYAAPRSRSEGI-KWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI
        VS WAFSSFLFRYAAPRSRSE   KW VVMSEF PIYIYL+I LLVSLIPLGLPF FASNSSTYLEKLS YECGF PSSDARS F        FYL+S++
Subjt:  VSGWAFSSFLFRYAAPRSRSEGI-KWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI

TrEMBL top hitse value%identityAlignment
A0A151UDJ4 Uncharacterized protein (Fragment)3.4e-2383.56Show/hide
Query:  FRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSH
        FRYAAP +RSE  KW VVMSEFAPI IYL+ISLLVSLI LGLPF FASNSSTY EKLSAYECGFDP  DARSH
Subjt:  FRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSH

A0A444Y6J8 NADH dehydrogenase subunit 31.2e-2368.04Show/hide
Query:  GWAFSSFLFRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI
        G+  + F FRYAAPR+R E  KWAVVMSEFAPI I L+ISLLVSLIPLG+PF FASNS TY EKLSAYECGFDP  DARS F        FYL+S++
Subjt:  GWAFSSFLFRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI

A0A5A7VB34 NADH dehydrogenase subunit 31.5e-2673.68Show/hide
Query:  AFSSFLFRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI
        +  +FLFRYAAPRSRSE  KWAVVMSEFAPI IYL+IS LVSLIPLGLPF FASNS+TY EKLSAYECGFDPS DARS F        FYL+S++
Subjt:  AFSSFLFRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI

A0A6A5LPN8 NADH dehydrogenase subunit 34.0e-2474.16Show/hide
Query:  FRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI
        F YAAPR+RSE  KW VVMSEFAPI IYL+ISLLVSLIPLGLPF FASNSSTY EKLSAYECGFDP  DARS F        FYL+S++
Subjt:  FRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI

A0A6S7L7V2 NADH dehydrogenase subunit 36.2e-2574.16Show/hide
Query:  FRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI
        FRYAAPR+RSE  KWAVVMSEFAPI+IYL+IS LVSLIPLG+PF FASNSSTY EKLSAYECGFDP  DARS F        FYL+S++
Subjt:  FRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI

SwissProt top hitse value%identityAlignment
P27062 NADH-ubiquinone oxidoreductase chain 36.4e-1973.24Show/hide
Query:  MSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI
        MSEFAPI IYL+ISLLVSLIPLG+PF FASNSSTY +KLSAYECGFDPS DARS F        FYL+S++
Subjt:  MSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI

P68160 NADH-ubiquinone oxidoreductase chain 32.7e-1769.44Show/hide
Query:  VMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI
        +M EFAPI+IYL+ISLLVSLI LG+PF FASNSSTY EKLSAYECGFDP  DARS F        FYL+S++
Subjt:  VMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI

P92533 NADH-ubiquinone oxidoreductase chain 32.7e-1769.44Show/hide
Query:  VMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI
        +M EFAPI+IYL+ISLLVSLI LG+PF FASNSSTY EKLSAYECGFDP  DARS F        FYL+S++
Subjt:  VMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI

Q36664 NADH-ubiquinone oxidoreductase chain 31.6e-1770.42Show/hide
Query:  MSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI
        MSEFAPI IYL+ISLLV LIPLG+PF FASN STY EKLSAYECGFDP  DARS F        FYL+S++
Subjt:  MSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI

Q96007 NADH-ubiquinone oxidoreductase chain 31.2e-1770.42Show/hide
Query:  MSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI
        MSEF+PI+IYL++SLLVSLI LGLPF FASNSSTY EKLSAYECGFDP  DARS F        FYL+S++
Subjt:  MSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI

Arabidopsis top hitse value%identityAlignment
AT2G07751.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein2.9e-1973.24Show/hide
Query:  MSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI
        MSEFAPI IYL+ISLLVSLI LG+PF FASNSSTY EKLSAYECGFDPS DARS F        FYL+S++
Subjt:  MSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI

ATMG00990.1 NADH dehydrogenase 32.9e-1972.22Show/hide
Query:  VMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI
        +MSEFAPI IYL+ISLLVSLI LG+PF FASNSSTY EKLSAYECGFDPS DARS F        FYL+S++
Subjt:  VMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTTTGTGGGGTTTCGGGATGGGCTTTTTCTTCTTTTCTTTTTCGATATGCCGCTCCACGATCAAGGAGCGAAGGAATCAAGTGGGCCGTGGTGATGTCAGAATT
TGCACCTATTTATATCTATTTAATGATTAGTCTGCTAGTTTCTTTGATCCCACTCGGTCTTCCTTTCACATTTGCTTCCAATAGTTCAACCTATCTAGAAAAATTGTCGG
CCTATGAATGTGGTTTCGATCCTTCCAGTGACGCCAGAAGTCATTTCATATCCAATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTTTGTGGGGTTTCGGGATGGGCTTTTTCTTCTTTTCTTTTTCGATATGCCGCTCCACGATCAAGGAGCGAAGGAATCAAGTGGGCCGTGGTGATGTCAGAATT
TGCACCTATTTATATCTATTTAATGATTAGTCTGCTAGTTTCTTTGATCCCACTCGGTCTTCCTTTCACATTTGCTTCCAATAGTTCAACCTATCTAGAAAAATTGTCGG
CCTATGAATGTGGTTTCGATCCTTCCAGTGACGCCAGAAGTCATTTCATATCCAATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCTGA
Protein sequenceShow/hide protein sequence
MLLCGVSGWAFSSFLFRYAAPRSRSEGIKWAVVMSEFAPIYIYLMISLLVSLIPLGLPFTFASNSSTYLEKLSAYECGFDPSSDARSHFISNFILFPFYLLSLI