; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc02g0059751 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0059751
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationCMiso1.1chr02:24650976..24655011
RNA-Seq ExpressionCmc02g0059751
SyntenyCmc02g0059751
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33856.1 nucleotide binding protein [Cucumis melo subsp. melo]8.0e-16599.3Show/hide
Query:  SFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGGSDHAVVLWNMK
        SFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGGSDHAVVLWNMK
Subjt:  SFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGGSDHAVVLWNMK

Query:  DKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIRLEQKEVHSF
        DKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVG+ILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIRLEQKEVHSF
Subjt:  DKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIRLEQKEVHSF

Query:  GWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
        GWKQENS+SQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
Subjt:  GWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV

TYJ98411.1 nucleotide binding protein [Cucumis melo var. makuwa]5.6e-16697.93Show/hide
Query:  QIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGGSDHAV
        Q+  K SFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGGSDHAV
Subjt:  QIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGGSDHAV

Query:  VLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIRLEQ
        VLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVG+ILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIRLEQ
Subjt:  VLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIRLEQ

Query:  KEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
        KEVHSFGWKQENS+SQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
Subjt:  KEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV

XP_008464363.1 PREDICTED: uncharacterized protein LOC103502273 isoform X1 [Cucumis melo]1.2e-17199.32Show/hide
Query:  MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG
        MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG
Subjt:  MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG

Query:  SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD
        SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVG+ILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD
Subjt:  SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD

Query:  IRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
        IRLEQKEVHSFGWKQENS+SQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
Subjt:  IRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV

XP_011648713.1 uncharacterized protein LOC101206361 [Cucumis sativus]6.6e-16796.27Show/hide
Query:  MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG
        MINLWQIQSKGSFASLLCATNC+SQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQIS+LNFNRTKEKA+VTFLEDKPHVKGIINDISFLPWDSVPFITGG
Subjt:  MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG

Query:  SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD
        SDHAVVLWNM+DKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAG+DKR LGFDVQVG+ LFKHQLESKCMSVLPNPCDFNLF VQTGSP NQLRLFD
Subjt:  SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD

Query:  IRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
        IRLEQKEVHSFGWKQENSESQSALIKQSWSPNGL+LTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
Subjt:  IRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV

XP_016903192.1 PREDICTED: uncharacterized protein LOC103502273 isoform X2 [Cucumis melo]1.2e-17199.32Show/hide
Query:  MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG
        MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG
Subjt:  MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG

Query:  SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD
        SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVG+ILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD
Subjt:  SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD

Query:  IRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
        IRLEQKEVHSFGWKQENS+SQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
Subjt:  IRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV

TrEMBL top hitse value%identityAlignment
A0A0A0LRK6 WD_REPEATS_REGION domain-containing protein3.2e-16796.27Show/hide
Query:  MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG
        MINLWQIQSKGSFASLLCATNC+SQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQIS+LNFNRTKEKA+VTFLEDKPHVKGIINDISFLPWDSVPFITGG
Subjt:  MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG

Query:  SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD
        SDHAVVLWNM+DKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAG+DKR LGFDVQVG+ LFKHQLESKCMSVLPNPCDFNLF VQTGSP NQLRLFD
Subjt:  SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD

Query:  IRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
        IRLEQKEVHSFGWKQENSESQSALIKQSWSPNGL+LTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
Subjt:  IRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV

A0A1S3CLR0 uncharacterized protein LOC103502273 isoform X15.6e-17299.32Show/hide
Query:  MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG
        MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG
Subjt:  MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG

Query:  SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD
        SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVG+ILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD
Subjt:  SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD

Query:  IRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
        IRLEQKEVHSFGWKQENS+SQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
Subjt:  IRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV

A0A1S4E4P3 uncharacterized protein LOC103502273 isoform X25.6e-17299.32Show/hide
Query:  MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG
        MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG
Subjt:  MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG

Query:  SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD
        SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVG+ILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD
Subjt:  SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD

Query:  IRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
        IRLEQKEVHSFGWKQENS+SQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
Subjt:  IRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV

A0A5A7UU99 Nucleotide binding protein5.6e-17299.32Show/hide
Query:  MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG
        MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG
Subjt:  MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG

Query:  SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD
        SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVG+ILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD
Subjt:  SDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFD

Query:  IRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
        IRLEQKEVHSFGWKQENS+SQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
Subjt:  IRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV

A0A5D3BIA6 Nucleotide binding protein2.7e-16697.93Show/hide
Query:  QIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGGSDHAV
        Q+  K SFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGGSDHAV
Subjt:  QIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGGSDHAV

Query:  VLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIRLEQ
        VLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVG+ILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIRLEQ
Subjt:  VLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIRLEQ

Query:  KEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
        KEVHSFGWKQENS+SQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV
Subjt:  KEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV

SwissProt top hitse value%identityAlignment
O15736 Protein tipD5.1e-0521.86Show/hide
Query:  GGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPW------------------------DSVPFITGGSDHAVVLWNMKDKY
        GG+    V++   G  + ++L    ++   +V+F  +   + G  ND S   W                        +S   +TG  D  + LW+++  Y
Subjt:  GGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPW------------------------DSVPFITGGSDHAVVLWNMKDKY

Query:  NTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVG--NILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIRLEQKEVHSFG
         T +      + +   ++G SG  +     S   D     +D   G    +     E +  S+  +P + N   + T S  + L++ DIR     + +F 
Subjt:  NTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVG--NILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIRLEQKEVHSFG

Query:  WKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQ--KRVFKAVWLRSLPFLVSISSDLNI
         K     +     K SWSP+G Y+ SGS D  I ++D   N        K H     V    W       +S   D NI
Subjt:  WKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQ--KRVFKAVWLRSLPFLVSISSDLNI

Q2HJH6 U5 small nuclear ribonucleoprotein 40 kDa protein5.1e-0522.49Show/hide
Query:  YNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFL----PWDSVPFI--TGGSDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMK
        YN DG     S+L    T +   V   E    VK +    SF+    P    P +  TG  D  V LW+++      K   +    ++  V+ V+     
Subjt:  YNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFL----PWDSVPFI--TGGSDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMK

Query:  QIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIR---LEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLT
          ++S G D     +D++   + +  +  +  ++ L    + +   + + +  N +R++D+R    +++ V  F     N E    L++ SWSP+G  + 
Subjt:  QIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIR---LEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLT

Query:  SGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSD
        +GS+D  ++V+D    S      L  H   + +  +    P ++S SSD
Subjt:  SGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSD

Q6P5M2 WD repeat-containing protein 611.9e-0424.5Show/hide
Query:  SVPFITGGSDHAVVLWNMKDKYNTWKPELLHR-NLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFA-----
        S   +TG  D  V +W   D+    K EL      H   V+ V+  Q   I  S+  D     +D++ G        + K M   P       F+     
Subjt:  SVPFITGGSDHAVVLWNMKDKYNTWKPELLHR-NLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFA-----

Query:  VQTGSPGNQLRLFDIRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSD
        + TGS   ++ +F +   +KE HS   + +       ++  ++SP+G YL SG+ D +I++FDI     +   +L+ H   +    +      LV+ S D
Subjt:  VQTGSPGNQLRLFDIRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSD

Q6PE01 U5 small nuclear ribonucleoprotein 40 kDa protein6.7e-0522.49Show/hide
Query:  YNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFL----PWDSVPFI--TGGSDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMK
        YN DG     S+L    T +   V   E    VK +    SF+    P    P +  TG  D  V LW+++      K   +    ++  V+ V+     
Subjt:  YNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFL----PWDSVPFI--TGGSDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMK

Query:  QIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIR---LEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLT
          ++S G D     +D++   + +  +  +  ++ L    + +   + + +  N +R++D+R    +++ V  F     N E    L++ SWSP+G  + 
Subjt:  QIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIR---LEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLT

Query:  SGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSD
        +GS+D  ++V+D    S      L  H   + +  +    P ++S SSD
Subjt:  SGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSD

Q96DI7 U5 small nuclear ribonucleoprotein 40 kDa protein3.9e-0522.49Show/hide
Query:  YNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFL----PWDSVPFI--TGGSDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMK
        YN DG     S+L    T +   V   E    VK +    SF+    P    P +  TG  D  V LW+++      K   +    ++  V+ V+     
Subjt:  YNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFL----PWDSVPFI--TGGSDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMK

Query:  QIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIR---LEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLT
          ++S G D     +D++   + +  +  +  ++ L    + +   + + +  N +R++D+R    +++ V  F     N E    L++ SWSP+G  + 
Subjt:  QIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIR---LEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLT

Query:  SGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSD
        +GS+D  ++V+D    S      L  H   + +  +    P ++S SSD
Subjt:  SGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSD

Arabidopsis top hitse value%identityAlignment
AT2G43770.1 Transducin/WD40 repeat-like superfamily protein1.0e-0827.36Show/hide
Query:  ITGGSDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGN---ILFKHQLESKCMSVLPNPCDFNLFAVQTGSPG
        I+G  D    LW+M+ +        +        +  VS       + + G D     +D++ G     L  HQ     MS+ P+        + T    
Subjt:  ITGGSDHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGN---ILFKHQLESKCMSVLPNPCDFNLFAVQTGSPG

Query:  NQLRLFDIR---LEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIG
        N+L ++D+R    + + V  F   Q N E    L+K SWSP+G  +T+GSSD ++H++D    S      L  H   V + V+  + P + S SSD NI 
Subjt:  NQLRLFDIR---LEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIG

Query:  L
        L
Subjt:  L

AT5G19920.1 Transducin/WD40 repeat-like superfamily protein1.5e-10058.02Show/hide
Query:  INLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGGS
        ++ W++QS  S A+L    N ++  Q++W E IAWHP  N LFSVY AD G  QIS +  N   E+    F+ED+PH KG+IN I F PWD   FITGGS
Subjt:  INLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGGS

Query:  DHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDI
        DHAVVLW  + + N WKP LLHR+LHSSAVMGV+GM+    VLS G D+RF+GFD +   + FKH+L+++C +++PNP D NL  V T     QLRL+D+
Subjt:  DHAVVLWNMKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDI

Query:  RLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKM
        RL Q E+ SFGWKQE+SESQSALI QSWSP+GL+++SGS+DPVIH+FDIRYN+  PS S+KAH+KRVFKA W  S P LVSISSDL IG+HK+
Subjt:  RLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKM

AT5G50970.1 transducin family protein / WD-40 repeat family protein1.4e-12269.83Show/hide
Query:  MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG
        M++LWQ+Q     ASLL  T+C+S+KQRRW E +AWHP GN LFSVY AD GDSQISILN N+T+E   VTFLE+KPHVKGIIN+I F+PW++  F+TGG
Subjt:  MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGG

Query:  SDHAVVLWN-MKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLF
        SDHAVVLWN   D+ N WK + LHRNLHS+AVMGV GM+ K ++LS GADKR  GFDVQVG   +KHQ++ KCMSVL NPCDFNLF VQ+G P  QLRLF
Subjt:  SDHAVVLWN-MKDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLF

Query:  DIRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKM
        DIRL + E+HSFGWKQ++SESQSALI QSWSP+GLY+TSGS DPVIHVFDIRYN+  P+QS+KAHQKRVFKA W  S P L+SISSDLNIGLHK+
Subjt:  DIRLEQKEVHSFGWKQENSESQSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAACCTGTGGCAAATTCAGTCAAAGGGGTCTTTTGCTTCTCTTCTTTGTGCTACAAACTGTATGTCTCAAAAGCAGAGGAGATGGCCTGAAGGTATAGCTTGGCA
CCCGGGTGGAAACAACCTATTTTCTGTGTACAACGCTGATGGTGGAGATTCTCAAATATCAATCCTGAACTTCAATAGGACTAAAGAGAAGGCCAATGTTACTTTCTTAG
AGGATAAGCCTCATGTTAAAGGCATTATCAACGACATTAGTTTCTTGCCTTGGGATTCTGTTCCGTTCATTACTGGTGGCAGTGATCACGCCGTCGTTCTATGGAATATG
AAAGATAAATATAACACATGGAAACCAGAGCTGTTGCACAGGAATCTGCACTCTTCTGCTGTCATGGGTGTCTCTGGGATGCAGATGAAGCAAATCGTACTTTCTGCAGG
TGCAGACAAGAGATTCCTTGGTTTTGATGTTCAAGTAGGAAATATACTCTTCAAGCATCAACTAGAGAGTAAATGTATGAGTGTGTTGCCTAATCCATGTGACTTTAACC
TGTTCGCGGTCCAAACAGGGAGTCCAGGAAATCAACTTAGATTATTTGACATTAGATTGGAACAGAAAGAAGTCCATAGTTTTGGGTGGAAGCAAGAAAACAGTGAATCT
CAATCAGCTTTGATAAAGCAGTCATGGTCACCAAATGGATTATACTTAACGTCTGGTTCATCCGATCCTGTAATTCATGTTTTTGACATCAGGTATAATTCTCACATGCC
ATCTCAATCACTTAAAGCTCATCAGAAGCGCGTTTTCAAAGCTGTTTGGCTCCGTTCTCTTCCTTTTCTTGTTTCCATTTCATCTGATTTGAACATTGGACTGCACAAAA
TGGTCTAG
mRNA sequenceShow/hide mRNA sequence
GTAGTGCTTTGGATGGAATGATCAACCTGTGGCAAATTCAGTCAAAGGGGTCTTTTGCTTCTCTTCTTTGTGCTACAAACTGTATGTCTCAAAAGCAGAGGAGATGGCCT
GAAGGTATAGCTTGGCACCCGGGTGGAAACAACCTATTTTCTGTGTACAACGCTGATGGTGGAGATTCTCAAATATCAATCCTGAACTTCAATAGGACTAAAGAGAAGGC
CAATGTTACTTTCTTAGAGGATAAGCCTCATGTTAAAGGCATTATCAACGACATTAGTTTCTTGCCTTGGGATTCTGTTCCGTTCATTACTGGTGGCAGTGATCACGCCG
TCGTTCTATGGAATATGAAAGATAAATATAACACATGGAAACCAGAGCTGTTGCACAGGAATCTGCACTCTTCTGCTGTCATGGGTGTCTCTGGGATGCAGATGAAGCAA
ATCGTACTTTCTGCAGGTGCAGACAAGAGATTCCTTGGTTTTGATGTTCAAGTAGGAAATATACTCTTCAAGCATCAACTAGAGAGTAAATGTATGAGTGTGTTGCCTAA
TCCATGTGACTTTAACCTGTTCGCGGTCCAAACAGGGAGTCCAGGAAATCAACTTAGATTATTTGACATTAGATTGGAACAGAAAGAAGTCCATAGTTTTGGGTGGAAGC
AAGAAAACAGTGAATCTCAATCAGCTTTGATAAAGCAGTCATGGTCACCAAATGGATTATACTTAACGTCTGGTTCATCCGATCCTGTAATTCATGTTTTTGACATCAGG
TATAATTCTCACATGCCATCTCAATCACTTAAAGCTCATCAGAAGCGCGTTTTCAAAGCTGTTTGGCTCCGTTCTCTTCCTTTTCTTGTTTCCATTTCATCTGATTTGAA
CATTGGACTGCACAAAATGGTCTAGATATTCCATGTGCAAGTTATTAATGCTGCATGCTAACTGCTATAAGAGGGTCATATCACGTTGATTGCCGTTTTTGCACGTTCCC
TAAACAAATTATCAAGAGGTGATTTAGATACAGTGTAGCAAAGAATAGAAGCAATAAATGGGCTTGAGTTAGCTGTCTGAAGGAGTGCAGTGCATAGCAACGTGGTTGTG
AAGACTTGATGAAGCTTTGGCTTGTGACTTGGTAAGTTTGTGGGAATATATGTAGAAAATTTGTTGATTTTGTTGCCCTACATGTATTTCAAATGAATTGCAAACGGATA
TAGATGTTTCACTTTCTTAGAGGGCTGGGGTGCCTTCCTGCTATTTAAAACTTTTGTAGCACGATCTGACTAGTTGCTAGTGAAGGAGAAAATTTCCAAATTCTAAGAGG
GATCCAATCACTTATTTGTGCTGTCTTCGCCATTCCAGTTAAGTGAAAAGAATGAGCAGTTGTCCGATGGTGCTCTAAGTTAAAAACTTGCGTTTTGCAGTAATGGTTCA
TACCAATGCTGTGGATATGTCCATTCAATGGTTGGTGTTTTTTCCACAGGAATAAAAGTTTACTCGACTGATTATTGGCTTAGATGTGCCAGTAACCCTTTTCTATTCCG
CGGAATATTAATTAGTGATGCCATGTCTTCTATTCTTATATTCGATAAAAGAATTGAAAGGAATATTAGAGAGATTTCTTCTTTTCGTATCTTGTTGCGTTGTAACTTTG
TTTATGGATTCGGTGATAACTAGACTTGTCTGAATC
Protein sequenceShow/hide protein sequence
MINLWQIQSKGSFASLLCATNCMSQKQRRWPEGIAWHPGGNNLFSVYNADGGDSQISILNFNRTKEKANVTFLEDKPHVKGIINDISFLPWDSVPFITGGSDHAVVLWNM
KDKYNTWKPELLHRNLHSSAVMGVSGMQMKQIVLSAGADKRFLGFDVQVGNILFKHQLESKCMSVLPNPCDFNLFAVQTGSPGNQLRLFDIRLEQKEVHSFGWKQENSES
QSALIKQSWSPNGLYLTSGSSDPVIHVFDIRYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMV