| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032310.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.8e-106 | 95.57 | Show/hide |
Query: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
VFSKIDLKS YHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPF+ KFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKH+LFA
Subjt: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
Query: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
NKKKCNFGQKKVEYLGHIISGE VEVDSEKIK VADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQL KKGGFKWN+DAEESFRK KSAMMSLP
Subjt: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
Query: TLA
TLA
Subjt: TLA
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| KAA0033035.1 Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa] | 4.7e-108 | 97.04 | Show/hide |
Query: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
VFSKIDLKSGYHQIRMIDKDIPKTAF THEGHYEFLVMPFGLTNAPATFQALMNSIFRPF+RKFVLVFF+DILIYSKNEKDHIEHIEKVFLALRKHTLFA
Subjt: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
Query: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
NKKKCNFGQKKVEYLGHIISGE VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQL KKGGFKWNEDAEESFRK KSAMMSLP
Subjt: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
Query: TLA
TLA
Subjt: TLA
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| KAA0037097.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] | 2.4e-107 | 96.06 | Show/hide |
Query: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPF+RKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKH+LFA
Subjt: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
Query: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
NKKKCNFGQKKVEYLGHIISGE VEVDS+KIK VADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQL KKGGFKWNEDA+ESFRK KSAMMSLP
Subjt: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
Query: TLA
TLA
Subjt: TLA
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| TYK02195.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.8e-108 | 97.04 | Show/hide |
Query: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPF+RKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKH+LFA
Subjt: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
Query: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
NKKKCNFGQKKVEYLGHIISGE VEVDSEKIK VADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQL KKGGFKWNEDAEESFRK KSAMMSLP
Subjt: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
Query: TLA
TLA
Subjt: TLA
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| TYK23779.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.6e-108 | 96.55 | Show/hide |
Query: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
+FSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAP TFQALMNSIFRPF+RKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKH+LFA
Subjt: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
Query: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
NKKKCNFGQKKVEYLGHIISGE VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQL KKGGFKWNEDAEESFRK KSAMMSLP
Subjt: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
Query: TLA
TLA
Subjt: TLA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SNE3 Ty3/gypsy retrotransposon protein | 2.8e-106 | 95.57 | Show/hide |
Query: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
VFSKIDLKS YHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPF+ KFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKH+LFA
Subjt: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
Query: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
NKKKCNFGQKKVEYLGHIISGE VEVDSEKIK VADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQL KKGGFKWN+DAEESFRK KSAMMSLP
Subjt: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
Query: TLA
TLA
Subjt: TLA
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| A0A5A7SV50 Transposon Tf2-6 polyprotein | 2.3e-108 | 97.04 | Show/hide |
Query: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
VFSKIDLKSGYHQIRMIDKDIPKTAF THEGHYEFLVMPFGLTNAPATFQALMNSIFRPF+RKFVLVFF+DILIYSKNEKDHIEHIEKVFLALRKHTLFA
Subjt: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
Query: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
NKKKCNFGQKKVEYLGHIISGE VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQL KKGGFKWNEDAEESFRK KSAMMSLP
Subjt: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
Query: TLA
TLA
Subjt: TLA
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| A0A5A7T6B1 Transposon Ty3-G Gag-Pol polyprotein | 1.1e-107 | 96.06 | Show/hide |
Query: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPF+RKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKH+LFA
Subjt: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
Query: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
NKKKCNFGQKKVEYLGHIISGE VEVDS+KIK VADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQL KKGGFKWNEDA+ESFRK KSAMMSLP
Subjt: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
Query: TLA
TLA
Subjt: TLA
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| A0A5D3BSP2 Ty3/gypsy retrotransposon protein | 1.3e-108 | 97.04 | Show/hide |
Query: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPF+RKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKH+LFA
Subjt: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
Query: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
NKKKCNFGQKKVEYLGHIISGE VEVDSEKIK VADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQL KKGGFKWNEDAEESFRK KSAMMSLP
Subjt: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
Query: TLA
TLA
Subjt: TLA
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| A0A5D3DKH5 Ty3/gypsy retrotransposon protein | 1.8e-108 | 96.55 | Show/hide |
Query: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
+FSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAP TFQALMNSIFRPF+RKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKH+LFA
Subjt: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
Query: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
NKKKCNFGQKKVEYLGHIISGE VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQL KKGGFKWNEDAEESFRK KSAMMSLP
Subjt: NKKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
Query: TLA
TLA
Subjt: TLA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.0e-41 | 41.38 | Show/hide |
Query: FSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFAN
F+ IDL G+HQI M + + KTAF T GHYE+L MPFGL NAPATFQ MN I RP + K LV+ DDI+++S + +H++ + VF L K L
Subjt: FSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFAN
Query: KKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGG--FKWNEDAEESFRKRKSAMMSL
KC F +++ +LGH+++ + ++ + EKI+ + +P PT +E++ FLGLTGYYR+F+ ++ IA P+T+ KK N + + +F+K K +
Subjt: KKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGG--FKWNEDAEESFRKRKSAMMSL
Query: PTL
P L
Subjt: PTL
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.5e-43 | 44.33 | Show/hide |
Query: FSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFAN
F+ IDL G+HQI M ++ I KTAF T GHYE+L MPFGL NAPATFQ MN+I RP + K LV+ DDI+I+S + +H+ I+ VF L L
Subjt: FSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFAN
Query: KKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAE--ESFRKRKSAMMSL
KC F +K+ +LGHI++ + ++ + K+K + +P PT +E+R FLGLTGYYR+F+ +Y IA P+T KK + E E+F K K+ ++
Subjt: KKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAE--ESFRKRKSAMMSL
Query: PTL
P L
Subjt: PTL
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 4.6e-37 | 40.1 | Show/hide |
Query: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
+F+ +DL SGYHQI M KD KTAF T G YE+ VMPFGL NAP+TF M FR +FV V+ DDILI+S++ ++H +H++ V L+ L
Subjt: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
Query: NKKKCNFGQKKVEYLGHIIS-GEVEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
KKKC F ++ E+LG+ I ++ K + D+P P +++ + FLG+ YYRRF+ + IA P+ QL +W E +++ K K+A+ + P
Subjt: NKKKCNFGQKKVEYLGHIIS-GEVEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
Query: TL
L
Subjt: TL
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 5.8e-40 | 39.25 | Show/hide |
Query: FSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFAN
F+ +DL SG+HQI M + DIPKTAF T G YEFL +PFGL NAPA FQ +++ I R + K V+ DDI+++S++ H +++ V +L K L N
Subjt: FSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFAN
Query: KKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRK------------KGGFKWNEDAEESF
+K +F +VE+LG+I++ + ++ D +K++ +++ P PT+++E++ FLG+T YYR+F+Q Y +A PLT L + K +E A +SF
Subjt: KKKCNFGQKKVEYLGHIISGE-VEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRK------------KGGFKWNEDAEESF
Query: RKRKSAMMSLPTLA
KS + S LA
Subjt: RKRKSAMMSLPTLA
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.0e-36 | 40.1 | Show/hide |
Query: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
+F+ +DL SGYHQI M KD KTAF T G YE+ VMPFGL NAP+TF M FR +FV V+ DDILI+S++ ++H +H++ V L+ L
Subjt: VFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFMRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHTLFA
Query: NKKKCNFGQKKVEYLGHIIS-GEVEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
KKKC F ++ E+LG+ I ++ K + D+P P +++ + FLG+ YYRRF+ + IA P+ QL +W E +++ K K A+ + P
Subjt: NKKKCNFGQKKVEYLGHIIS-GEVEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLRKKGGFKWNEDAEESFRKRKSAMMSLP
Query: TL
L
Subjt: TL
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