; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0059931 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0059931
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr03:156658..157527
RNA-Seq ExpressionCmc03g0059931
SyntenyCmc03g0059931
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006486 - protein glycosylation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0097359 - UDP-glucosylation (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0003980 - UDP-glucose:glycoprotein glucosyltransferase activity (molecular function)
GO:0008236 - serine-type peptidase activity (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033503.1 serine/threonine-protein kinase TIO-like [Cucumis melo var. makuwa]5.4e-9770.43Show/hide
Query:  MAHFLPCKKTNDV-YIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTDGQTEVTNRTLGNFIRCLSGSKPKQWDLALAQ
        M HF+ C+KTNDV Y ANLFF EIIRLHG+SK+I+SD+DVKFLSHF R LWKKL+TTLK+STT HPQTDGQTEVTNRTL N IRCLSG+K KQ DLALAQ
Subjt:  MAHFLPCKKTNDV-YIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTDGQTEVTNRTLGNFIRCLSGSKPKQWDLALAQ

Query:  AEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHL-KNIFPT
         +F FNNMKNRST +CPFE+VY K PRLTFDLA+LP+  D N E E MIE+I++LHKEV +HL  TT SYK+  DKKRR+  F EGDLV+IHL KN F  
Subjt:  AEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHL-KNIFPT

Query:  GTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNEFQLAD
        GTYNKLK KQLGP + L K+ DNA+++ELP DLHI   FNVADLK Y+APN+F+LA+
Subjt:  GTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNEFQLAD

KAA0039021.1 UDP-glucose:glycoprotein glucosyltransferase isoform X1 [Cucumis melo var. makuwa]8.0e-8585.95Show/hide
Query:  IWEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKTND-VYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQT
        IWEDLS DFVLGLPKTQRQ+D VMVVVD+FSKMAHFLPCKKTND V+IANLFFREI+RLHGI KSIVSDRDVK LSHF R LWKKLDTTLKFSTT HPQT
Subjt:  IWEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKTND-VYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQT

Query:  DGQTEVTNRTLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQ
        DGQTEV NRTL N IRCL GSKPKQWDLALAQAEF FNNMKNRST RCPFEIVYT+SPRLTFDLANLPS  DI+ E ENMI+RI+
Subjt:  DGQTEVTNRTLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQ

KAA0054760.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.9e-10270.5Show/hide
Query:  RFSKMAHFLPCKKTND-VYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTDGQTEVTNRTLGNFIRCLSGSKPKQWDL
        +FSKM+HF+ CKKTND +YIANLFFRE++R+H + KSIVSDRDVKFLSHF R LWKK DTTL ++T  HPQTDGQTEVTNRTLGN IRCLSG+KPKQWDL
Subjt:  RFSKMAHFLPCKKTND-VYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTDGQTEVTNRTLGNFIRCLSGSKPKQWDL

Query:  ALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHL-KN
        ALAQAEF FNNMKNRST  CPF+IVYTK PRLT DL +LP+  +++ E E MI  I+ LHKEV +HL  TT SYK+  DKKRR+ +F +GDLVMIHL KN
Subjt:  ALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHL-KN

Query:  IFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNEFQLAD
         FPTGTYNKLK KQ+ P  +L KYGDNA+++ LP D+HI  VFNVADLK YHAP+ F+LAD
Subjt:  IFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNEFQLAD

TYJ99684.1 serine/threonine-protein kinase TIO-like [Cucumis melo var. makuwa]9.5e-8663.22Show/hide
Query:  RFSKMAHFLPCKKTND-VYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTDGQTEVTNRTLGNFIRCLSGSKPKQWDL
        +FSKM+HF+ CKKTND +YIANLFFRE                             K DTTL ++TT HPQTDGQTEVTNRTLGN IRCLSG+KPKQWDL
Subjt:  RFSKMAHFLPCKKTND-VYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTDGQTEVTNRTLGNFIRCLSGSKPKQWDL

Query:  ALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHL-KN
        ALAQAEF FNNMKNRST +CPF+IVYTK PRLT DL +LP+  +++ E E MI  I+ LHKEV +HL  TT SYK+  DKKRR+ +F +GDLVMIHL KN
Subjt:  ALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHL-KN

Query:  IFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNEFQLAD
         FPTGTYNKLK KQ+GP  +L KYGDNA+++ LP D+HI  VFNVADLK YHAP+ F+LAD
Subjt:  IFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNEFQLAD

TYK26823.1 serine/threonine-protein kinase TIO-like [Cucumis melo var. makuwa]5.4e-9770.43Show/hide
Query:  MAHFLPCKKTNDV-YIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTDGQTEVTNRTLGNFIRCLSGSKPKQWDLALAQ
        M HF+ C+KTNDV Y ANLFF EIIRLHG+SK+I+SD+DVKFLSHF R LWKKL+TTLK+STT HPQTDGQTEVTNRTL N IRCLSG+K KQ DLALAQ
Subjt:  MAHFLPCKKTNDV-YIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTDGQTEVTNRTLGNFIRCLSGSKPKQWDLALAQ

Query:  AEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHL-KNIFPT
         +F FNNMKNRST +CPFE+VY K PRLTFDLA+LP+  D N E E MIE+I++LHKEV +HL  TT SYK+  DKKRR+  F EGDLV+IHL KN F  
Subjt:  AEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHL-KNIFPT

Query:  GTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNEFQLAD
        GTYNKLK KQLGP + L K+ DNA+++ELP DLHI   FNVADLK Y+APN+F+LA+
Subjt:  GTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNEFQLAD

TrEMBL top hitse value%identityAlignment
A0A5A7SSR7 Serine/threonine-protein kinase TIO-like2.6e-9770.43Show/hide
Query:  MAHFLPCKKTNDV-YIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTDGQTEVTNRTLGNFIRCLSGSKPKQWDLALAQ
        M HF+ C+KTNDV Y ANLFF EIIRLHG+SK+I+SD+DVKFLSHF R LWKKL+TTLK+STT HPQTDGQTEVTNRTL N IRCLSG+K KQ DLALAQ
Subjt:  MAHFLPCKKTNDV-YIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTDGQTEVTNRTLGNFIRCLSGSKPKQWDLALAQ

Query:  AEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHL-KNIFPT
         +F FNNMKNRST +CPFE+VY K PRLTFDLA+LP+  D N E E MIE+I++LHKEV +HL  TT SYK+  DKKRR+  F EGDLV+IHL KN F  
Subjt:  AEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHL-KNIFPT

Query:  GTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNEFQLAD
        GTYNKLK KQLGP + L K+ DNA+++ELP DLHI   FNVADLK Y+APN+F+LA+
Subjt:  GTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNEFQLAD

A0A5A7UHK1 DNA/RNA polymerases superfamily protein9.2e-10370.5Show/hide
Query:  RFSKMAHFLPCKKTND-VYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTDGQTEVTNRTLGNFIRCLSGSKPKQWDL
        +FSKM+HF+ CKKTND +YIANLFFRE++R+H + KSIVSDRDVKFLSHF R LWKK DTTL ++T  HPQTDGQTEVTNRTLGN IRCLSG+KPKQWDL
Subjt:  RFSKMAHFLPCKKTND-VYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTDGQTEVTNRTLGNFIRCLSGSKPKQWDL

Query:  ALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHL-KN
        ALAQAEF FNNMKNRST  CPF+IVYTK PRLT DL +LP+  +++ E E MI  I+ LHKEV +HL  TT SYK+  DKKRR+ +F +GDLVMIHL KN
Subjt:  ALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHL-KN

Query:  IFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNEFQLAD
         FPTGTYNKLK KQ+ P  +L KYGDNA+++ LP D+HI  VFNVADLK YHAP+ F+LAD
Subjt:  IFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNEFQLAD

A0A5B7BER3 Uncharacterized protein1.3e-9662.32Show/hide
Query:  IWEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKTNDV-YIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQT
        IWEDL+ DF+LGLP+TQR  D V VVVDRFSKMAHF+PCKKT+D  ++ANLFFREI+RLHG+ KSI SDRDVKFLSHF R LW+K DT+L++S+T HPQT
Subjt:  IWEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKTNDV-YIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQT

Query:  DGQTEVTNRTLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTL
        DGQTEVTNRTLGN IRC SG +PKQWD+ L Q EF +N M NRST++ PFEIVYTK P+   DLA LP     +I  EN  +R  ++ +EV+++L+    
Subjt:  DGQTEVTNRTLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTL

Query:  SYKQDKDKKRRKVKFKEGDLVMIHL-KNIFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNE
         YK   DK RR   F EGDLVM+ L KN FP GTYNKLK+++ GP +V  K  DNAY +ELPDD+ IS  FNVADL  YH P+E
Subjt:  SYKQDKDKKRRKVKFKEGDLVMIHL-KNIFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNE

A0A5D3DT79 Serine/threonine-protein kinase TIO-like2.6e-9770.43Show/hide
Query:  MAHFLPCKKTNDV-YIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTDGQTEVTNRTLGNFIRCLSGSKPKQWDLALAQ
        M HF+ C+KTNDV Y ANLFF EIIRLHG+SK+I+SD+DVKFLSHF R LWKKL+TTLK+STT HPQTDGQTEVTNRTL N IRCLSG+K KQ DLALAQ
Subjt:  MAHFLPCKKTNDV-YIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTDGQTEVTNRTLGNFIRCLSGSKPKQWDLALAQ

Query:  AEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHL-KNIFPT
         +F FNNMKNRST +CPFE+VY K PRLTFDLA+LP+  D N E E MIE+I++LHKEV +HL  TT SYK+  DKKRR+  F EGDLV+IHL KN F  
Subjt:  AEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHL-KNIFPT

Query:  GTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNEFQLAD
        GTYNKLK KQLGP + L K+ DNA+++ELP DLHI   FNVADLK Y+APN+F+LA+
Subjt:  GTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNEFQLAD

A0A6N2LVR1 Uncharacterized protein2.7e-9460.78Show/hide
Query:  WEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKTND-VYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTD
        WEDLS DF+LGLP+TQR  D V VVVDRFSKMAHF+ CKKT+D V++ANLFF+E++RLHG+ KSI SDRD KFLSHF R LW++ DTTL FS+T+HPQTD
Subjt:  WEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKTND-VYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTD

Query:  GQTEVTNRTLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLS
        GQTEV NRTLGN IRCLSG +PKQWDL LAQAEF +N+M NRST + PF++VY + P+   DL  LP    +NI  E+M +R++++ +EVR++L+ +   
Subjt:  GQTEVTNRTLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLS

Query:  YKQDKDKKRRKVKFKEGDLVMIHL-KNIFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNE
        YK   DKKRR   FKEGDLVM++L K   P GT +KL  K+ GP ++L K  DNAYR++LP D+ IS  FNVADL  YH P+E
Subjt:  YKQDKDKKRRKVKFKEGDLVMIHL-KNIFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNE

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.3e-3736.33Show/hide
Query:  WEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKT-NDVYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTD
        WE LS DF+  LP++   N  + VVVDRFSKMA  +PC K+      A +F + +I   G  K I++D D  F S   +    K +  +KFS    PQTD
Subjt:  WEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKT-NDVYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTD

Query:  GQTEVTNRTLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLS
        GQTE TN+T+   +RC+  + P  W   ++  +  +NN  + +T+  PFEIV+  SP L+     LPS +D     EN  E IQ + + V+EHL    + 
Subjt:  GQTEVTNRTLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLS

Query:  YKQDKDKKRRKV-KFKEGDLVMIHLKNIFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLH--ISLVFNVADLKTYHAPNEFQLA
         K+  D K +++ +F+ GDLVM+           NKL     GP  VL K G N Y ++LPD +    S  F+V+ L+ Y   +E   A
Subjt:  YKQDKDKKRRKV-KFKEGDLVMIHLKNIFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLH--ISLVFNVADLKTYHAPNEFQLA

P0CT41 Transposon Tf2-12 polyprotein1.3e-3736.33Show/hide
Query:  WEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKT-NDVYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTD
        WE LS DF+  LP++   N  + VVVDRFSKMA  +PC K+      A +F + +I   G  K I++D D  F S   +    K +  +KFS    PQTD
Subjt:  WEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKT-NDVYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTD

Query:  GQTEVTNRTLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLS
        GQTE TN+T+   +RC+  + P  W   ++  +  +NN  + +T+  PFEIV+  SP L+     LPS +D     EN  E IQ + + V+EHL    + 
Subjt:  GQTEVTNRTLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLS

Query:  YKQDKDKKRRKV-KFKEGDLVMIHLKNIFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLH--ISLVFNVADLKTYHAPNEFQLA
         K+  D K +++ +F+ GDLVM+           NKL     GP  VL K G N Y ++LPD +    S  F+V+ L+ Y   +E   A
Subjt:  YKQDKDKKRRKV-KFKEGDLVMIHLKNIFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLH--ISLVFNVADLKTYHAPNEFQLA

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein7.4e-4134.15Show/hide
Query:  WEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKTND-VYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTD
        W D+S DFV GLP T    ++++VVVDRFSK AHF+  +KT D   + +L FR I   HG  ++I SDRDV+  +   + L K+L      S+  HPQTD
Subjt:  WEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKTND-VYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTD

Query:  GQTEVTNRTLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLP------SDADINIEGENMIE---RIQSLHKEVR
        GQ+E T +TL   +R    +  + W + L Q EFV+N+   R+  + PFEI          DL  LP      SD ++N      +E    +++L  + +
Subjt:  GQTEVTNRTLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLP------SDADINIEGENMIE---RIQSLHKEVR

Query:  EHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHLKNIFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYH
        E L++  +  + + +++R+ +    GD V++H    F  G Y K++   +GP +V+ K  DNAY ++L        V NV  LK+ +
Subjt:  EHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHLKNIFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYH

Q99315 Transposon Ty3-G Gag-Pol polyprotein2.5e-4134.27Show/hide
Query:  WEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKTND-VYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTD
        W D+S DFV GLP T    ++++VVVDRFSK AHF+  +KT D   + +L FR I   HG  ++I SDRDV+  +   + L K+L      S+  HPQTD
Subjt:  WEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKTND-VYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTD

Query:  GQTEVTNRTLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLP------SDADINIEGENMIE---RIQSLHKEVR
        GQ+E T +TL   +R  + +  + W + L Q EFV+N+   R+  + PFEI          DL  LP      SD ++N      +E    +++L  + +
Subjt:  GQTEVTNRTLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLP------SDADINIEGENMIE---RIQSLHKEVR

Query:  EHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHLKNIFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTY
        E L++  +  + + +++R+ +    GD V++H    F  G Y K++   +GP +V+ K  DNAY ++L        V NV  LK +
Subjt:  EHLQNTTLSYKQDKDKKRRKVKFKEGDLVMIHLKNIFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTY

Q9UR07 Transposon Tf2-11 polyprotein1.3e-3736.33Show/hide
Query:  WEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKT-NDVYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTD
        WE LS DF+  LP++   N  + VVVDRFSKMA  +PC K+      A +F + +I   G  K I++D D  F S   +    K +  +KFS    PQTD
Subjt:  WEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKT-NDVYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTD

Query:  GQTEVTNRTLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLS
        GQTE TN+T+   +RC+  + P  W   ++  +  +NN  + +T+  PFEIV+  SP L+     LPS +D     EN  E IQ + + V+EHL    + 
Subjt:  GQTEVTNRTLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLS

Query:  YKQDKDKKRRKV-KFKEGDLVMIHLKNIFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLH--ISLVFNVADLKTYHAPNEFQLA
         K+  D K +++ +F+ GDLVM+           NKL     GP  VL K G N Y ++LPD +    S  F+V+ L+ Y   +E   A
Subjt:  YKQDKDKKRRKV-KFKEGDLVMIHLKNIFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLH--ISLVFNVADLKTYHAPNEFQLA

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTATATGGGAGGACTTATCAGAAGATTTTGTATTGGGGCTACCTAAGACACAAAGACAGAATGATGTTGTAATGGTAGTGGTAGACAGATTCAGCAAAATGGCCCA
TTTTCTACCCTGCAAGAAGACTAATGATGTCTATATTGCTAATCTCTTTTTTCGAGAGATAATACGACTACATGGCATATCTAAATCTATTGTGTCAGATAGGGACGTGA
AATTCTTAAGCCACTTTGGGCGAATATTGTGGAAGAAACTAGACACCACACTTAAATTCAGTACTACAACACACCCACAAACAGATGGCCAAACTGAAGTCACTAACAGA
ACCTTGGGGAATTTTATTCGTTGTCTAAGTGGTTCTAAGCCGAAACAGTGGGATCTAGCACTAGCTCAAGCTGAATTTGTATTCAACAACATGAAAAACAGATCAACCGA
GAGATGCCCCTTTGAAATTGTTTACACTAAAAGTCCTAGACTTACGTTTGACCTTGCCAATCTACCATCTGATGCAGATATCAACATAGAAGGAGAAAATATGATCGAAA
GAATACAAAGTCTGCACAAAGAAGTTCGCGAACACCTACAGAATACTACTTTATCTTATAAACAAGATAAAGACAAGAAAAGAAGGAAAGTAAAGTTCAAAGAGGGAGAT
CTAGTGATGATTCATCTAAAGAACATATTTCCAACAGGGACATACAATAAACTAAAACACAAACAGCTTGGACCTTGTAAAGTACTAGCAAAATATGGTGATAATGCCTA
TAGAATGGAACTGCCCGACGACCTACATATCAGCCTTGTTTTTAACGTAGCAGACTTGAAGACCTATCACGCCCCAAATGAGTTCCAGCTTGCTGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTATATGGGAGGACTTATCAGAAGATTTTGTATTGGGGCTACCTAAGACACAAAGACAGAATGATGTTGTAATGGTAGTGGTAGACAGATTCAGCAAAATGGCCCA
TTTTCTACCCTGCAAGAAGACTAATGATGTCTATATTGCTAATCTCTTTTTTCGAGAGATAATACGACTACATGGCATATCTAAATCTATTGTGTCAGATAGGGACGTGA
AATTCTTAAGCCACTTTGGGCGAATATTGTGGAAGAAACTAGACACCACACTTAAATTCAGTACTACAACACACCCACAAACAGATGGCCAAACTGAAGTCACTAACAGA
ACCTTGGGGAATTTTATTCGTTGTCTAAGTGGTTCTAAGCCGAAACAGTGGGATCTAGCACTAGCTCAAGCTGAATTTGTATTCAACAACATGAAAAACAGATCAACCGA
GAGATGCCCCTTTGAAATTGTTTACACTAAAAGTCCTAGACTTACGTTTGACCTTGCCAATCTACCATCTGATGCAGATATCAACATAGAAGGAGAAAATATGATCGAAA
GAATACAAAGTCTGCACAAAGAAGTTCGCGAACACCTACAGAATACTACTTTATCTTATAAACAAGATAAAGACAAGAAAAGAAGGAAAGTAAAGTTCAAAGAGGGAGAT
CTAGTGATGATTCATCTAAAGAACATATTTCCAACAGGGACATACAATAAACTAAAACACAAACAGCTTGGACCTTGTAAAGTACTAGCAAAATATGGTGATAATGCCTA
TAGAATGGAACTGCCCGACGACCTACATATCAGCCTTGTTTTTAACGTAGCAGACTTGAAGACCTATCACGCCCCAAATGAGTTCCAGCTTGCTGACTAG
Protein sequenceShow/hide protein sequence
MFIWEDLSEDFVLGLPKTQRQNDVVMVVVDRFSKMAHFLPCKKTNDVYIANLFFREIIRLHGISKSIVSDRDVKFLSHFGRILWKKLDTTLKFSTTTHPQTDGQTEVTNR
TLGNFIRCLSGSKPKQWDLALAQAEFVFNNMKNRSTERCPFEIVYTKSPRLTFDLANLPSDADINIEGENMIERIQSLHKEVREHLQNTTLSYKQDKDKKRRKVKFKEGD
LVMIHLKNIFPTGTYNKLKHKQLGPCKVLAKYGDNAYRMELPDDLHISLVFNVADLKTYHAPNEFQLAD