| GenBank top hits | e value | %identity | Alignment |
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| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 2.0e-90 | 84.5 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
MLKSIRILLSIATFY+YEIWQMDVKTAFLNGNLEESIY+VQP GFI + QEQKVCKLQ IYGLKQASRS NIRFDTAIKSY FEQNVDEPCVYK+ +NS
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
Query: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
VAFL+LYVDDILLIGNDV +LTD+KKWL QFQMKDLG AQY+LGIQIVRNR NKTLAMSQ YIDK+LSRYKMQN KKG LP+R+GI+LSKEQCPKTP
Subjt: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 3.5e-95 | 89.5 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
M+KSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIY+VQP GFIQK QEQKVCKLQ IYGLKQASRS NIRFDT IKSY FEQNVDEPCVYKR INS
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
Query: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
TVAFLVLYVDDILLIGN+V HLTDIK+WL QFQMKDLG+AQYVLGIQIV+NR NKTLAMSQT YIDKMLSRYKMQN KKGLLPYRYGI+LSKEQCPKTP
Subjt: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
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| KAA0061927.1 gag/pol protein [Cucumis melo var. makuwa] | 3.9e-86 | 81 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLE S+Y+ QP GFI+ QEQKVCKLQ IY LKQASRS NI+FDT IK+Y FEQNV+EPCVYK+ +NS
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
Query: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
VAFLVLYVDDILLIGNDVG+LTDI+KWLA QFQMK LG+AQYVLGIQIVRNR N+TL MSQ YIDKMLSRYK+Q KGLL YRYGI+LSK+QCPKTP
Subjt: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 2.7e-95 | 89 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
M+KSIRILLSIATFYDYEIWQMDVKT FLN NLEESIY+VQP FIQK QEQK+CKLQ IYGLKQASRS NIRFDTAIKSY EQNVDEPCVYKR +NS
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
Query: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
TVAFLVLYVDDILLIGNDVGHL DIKKWLAMQFQMKDLGNAQYVLG+QIVRNR NKTLAMSQT YIDKMLSRYKM N KKGLLPYRYGI+LSKEQCPKTP
Subjt: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
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| TYK09500.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-92 | 85.5 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
MLKSIRILLSIATFYDYEIWQ+DVKTAFLNGNLEESIY+ QP GFI+K QEQK+CK Q IYGLKQASRS NIRFDTAIKSY FEQNVD+PCVYK+ +NS
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
Query: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
VAFLVLYVDDILL+GNDVG+LTDIKKWLA QFQMKD G+AQYVLGIQIVRNR N+TLAMS+ YIDKMLSRYKMQN KKGLLPYRYGI+LSKEQCPKTP
Subjt: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TTA2 Gag/pol protein | 1.7e-95 | 89.5 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
M+KSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIY+VQP GFIQK QEQKVCKLQ IYGLKQASRS NIRFDT IKSY FEQNVDEPCVYKR INS
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
Query: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
TVAFLVLYVDDILLIGN+V HLTDIK+WL QFQMKDLG+AQYVLGIQIV+NR NKTLAMSQT YIDKMLSRYKMQN KKGLLPYRYGI+LSKEQCPKTP
Subjt: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
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| A0A5A7V4T1 Gag/pol protein | 1.9e-86 | 81 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLE S+Y+ QP GFI+ QEQKVCKLQ IY LKQASRS NI+FDT IK+Y FEQNV+EPCVYK+ +NS
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
Query: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
VAFLVLYVDDILLIGNDVG+LTDI+KWLA QFQMK LG+AQYVLGIQIVRNR N+TL MSQ YIDKMLSRYK+Q KGLL YRYGI+LSK+QCPKTP
Subjt: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
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| A0A5D3BX45 Gag/pol protein | 1.3e-95 | 89 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
M+KSIRILLSIATFYDYEIWQMDVKT FLN NLEESIY+VQP FIQK QEQK+CKLQ IYGLKQASRS NIRFDTAIKSY EQNVDEPCVYKR +NS
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
Query: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
TVAFLVLYVDDILLIGNDVGHL DIKKWLAMQFQMKDLGNAQYVLG+QIVRNR NKTLAMSQT YIDKMLSRYKM N KKGLLPYRYGI+LSKEQCPKTP
Subjt: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
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| A0A5D3CDT9 Gag/pol protein | 6.0e-93 | 85.5 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
MLKSIRILLSIATFYDYEIWQ+DVKTAFLNGNLEESIY+ QP GFI+K QEQK+CK Q IYGLKQASRS NIRFDTAIKSY FEQNVD+PCVYK+ +NS
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
Query: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
VAFLVLYVDDILL+GNDVG+LTDIKKWLA QFQMKD G+AQYVLGIQIVRNR N+TLAMS+ YIDKMLSRYKMQN KKGLLPYRYGI+LSKEQCPKTP
Subjt: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
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| E2GK51 Gag/pol protein (Fragment) | 9.6e-91 | 84.5 | Show/hide |
Query: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
MLKSIRILLSIATFY+YEIWQMDVKTAFLNGNLEESIY+VQP GFI + QEQKVCKLQ IYGLKQASRS NIRFDTAIKSY FEQNVDEPCVYK+ +NS
Subjt: MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINS
Query: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
VAFL+LYVDDILLIGNDV +LTD+KKWL QFQMKDLG AQY+LGIQIVRNR NKTLAMSQ YIDK+LSRYKMQN KKG LP+R+GI+LSKEQCPKTP
Subjt: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.6e-26 | 35.15 | Show/hide |
Query: LKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVY---KRTI
+ S R +LS+ Y+ ++ QMDVKTAFLNG L+E IY+ P G VCKL IYGLKQA+R F+ A+K +F + + C+Y K I
Subjt: LKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVY---KRTI
Query: NSTVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLP----YRYGIYLSKE
N + +++LYVDD+++ D+ + + K++L +F+M DL ++ +GI+I + +SQ+ Y+ K+LS++ M+N P Y + S E
Subjt: NSTVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLP----YRYGIYLSKE
Query: QC
C
Subjt: QC
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.2e-42 | 45.73 | Show/hide |
Query: LKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVY-KRTINS
+ SIR +LS+A D E+ Q+DVKTAFL+G+LEE IY+ QP GF ++ VCKL +YGLKQA R ++FD+ +KS + + +PCVY KR +
Subjt: LKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVY-KRTINS
Query: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKT
L+LYVDD+L++G D G + +K L+ F MKDLG AQ +LG++IVR RT++ L +SQ YI+++L R+ M+N K P + LSK+ CP T
Subjt: TVAFLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKT
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.7e-15 | 32.28 | Show/hide |
Query: MDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINSTVAFLVLYVDDILLIGNDVGH
MDV TAFLN ++E IY+ QP GF+ + V +L +YGLKQA N + +K F ++ E +Y R+ + ++ +YVDD+L+
Subjt: MDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINSTVAFLVLYVDDILLIGNDVGH
Query: LTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPK
+K+ L + MKDLG LG+ I +N + +S YI K S ++ K
Subjt: LTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.8e-23 | 35.91 | Show/hide |
Query: SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINSTVA
SIRI+L +A + I Q+DV AFL G L + +Y+ QP GFI K + VCKL+ +YGLKQA R+ + + + F +V + ++ ++
Subjt: SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINSTVA
Query: FLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLP
++++YVDDIL+ GND L + L+ +F +KD Y LGI+ R T L +SQ YI +L+R M K P
Subjt: FLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.4e-22 | 32.49 | Show/hide |
Query: SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINSTVA
SIRI+L +A + I Q+DV AFL G L + +Y+ QP GF+ K + VC+L+ IYGLKQA R+ + T + + F ++ + ++ ++
Subjt: SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYIVQPAGFIQKSQEQKVCKLQNFIYGLKQASRSRNIRFDTAIKSYDFEQNVDEPCVYKRTINSTVA
Query: FLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
++++YVDDIL+ GND L L+ +F +K+ + Y LGI+ R + L +SQ Y +L+R M K P L+ K P
Subjt: FLVLYVDDILLIGNDVGHLTDIKKWLAMQFQMKDLGNAQYVLGIQIVRNRTNKTLAMSQTFYIDKMLSRYKMQNPKKGLLPYRYGIYLSKEQCPKTP
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