| GenBank top hits | e value | %identity | Alignment |
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 8.7e-82 | 92.17 | Show/hide |
Query: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEV+DMRRI YAS VGSLMYAMLCTRPDICYAV I+SRYQSNPGLDHWTAVKI+LKY
Subjt: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
Query: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
LRRTRDYM VYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVW +IKQGCIA+STMEA+
Subjt: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
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| KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa] | 1.9e-81 | 92.17 | Show/hide |
Query: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEV+DMRRI YAS VGSLMY MLCTRPDICYAV I+SRYQSNPGLDHWTAVKIILKY
Subjt: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
Query: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
LRRTRDYM VYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVW +IKQGCIA+STMEA+
Subjt: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
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| KAA0043583.1 putative Integrase core domain [Cucumis melo var. makuwa] | 3.3e-81 | 92.17 | Show/hide |
Query: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEV+DMRRI YASVVGSLMY ML TRPDICYAV I+SRYQSNPGLDHWTAVKIILKY
Subjt: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
Query: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
LRRTRDYM VY AKDLILTGYTDSDFQTDKD RKSTSGSVFTLNGGA+VWH+IKQGCIA+STMEA+
Subjt: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 8.7e-82 | 92.17 | Show/hide |
Query: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEV+DMRRI YAS VGSLMYAMLCTRPDICYAV I+SRYQSNPGLDHWTAVKI+LKY
Subjt: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
Query: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
LRRTRDYM VYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVW +IKQGCIA+STMEA+
Subjt: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
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| KAA0064276.1 gag/pol protein [Cucumis melo var. makuwa] | 2.5e-81 | 87.57 | Show/hide |
Query: MLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILK
MLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEV+DMRRI YAS VGSLMY LCTR DICYAV I+SRYQSNPGLDHWT VKIILK
Subjt: MLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILK
Query: YLRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEADTSLLVKQQKK
YLRRT+DYM VYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVW NIKQGCIA+STMEA+ + KK
Subjt: YLRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEADTSLLVKQQKK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TJH9 Putative Integrase core domain | 1.6e-81 | 92.17 | Show/hide |
Query: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEV+DMRRI YASVVGSLMY ML TRPDICYAV I+SRYQSNPGLDHWTAVKIILKY
Subjt: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
Query: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
LRRTRDYM VY AKDLILTGYTDSDFQTDKD RKSTSGSVFTLNGGA+VWH+IKQGCIA+STMEA+
Subjt: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
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| A0A5A7TKM4 Gag/pol protein | 9.4e-82 | 92.17 | Show/hide |
Query: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEV+DMRRI YAS VGSLMY MLCTRPDICYAV I+SRYQSNPGLDHWTAVKIILKY
Subjt: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
Query: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
LRRTRDYM VYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVW +IKQGCIA+STMEA+
Subjt: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
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| A0A5A7TZD0 Gag/pol protein | 4.2e-82 | 92.17 | Show/hide |
Query: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEV+DMRRI YAS VGSLMYAMLCTRPDICYAV I+SRYQSNPGLDHWTAVKI+LKY
Subjt: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
Query: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
LRRTRDYM VYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVW +IKQGCIA+STMEA+
Subjt: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
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| A0A5A7UYE8 Gag/pol protein | 4.2e-82 | 92.17 | Show/hide |
Query: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTPQEV+DMRRI YAS VGSLMYAMLCTRPDICYAV I+SRYQSNPGLDHWTAVKI+LKY
Subjt: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
Query: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
LRRTRDYM VYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVW +IKQGCIA+STMEA+
Subjt: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
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| A0A5A7VD16 Gag/pol protein | 1.2e-81 | 87.57 | Show/hide |
Query: MLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILK
MLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEV+DMRRI YAS VGSLMY LCTR DICYAV I+SRYQSNPGLDHWT VKIILK
Subjt: MLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILK
Query: YLRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEADTSLLVKQQKK
YLRRT+DYM VYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVW NIKQGCIA+STMEA+ + KK
Subjt: YLRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEADTSLLVKQQKK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.6e-17 | 32.75 | Show/hide |
Query: LSQATYIDKMLVRYSMQNSKKGLLPFRHGVH---LSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILK
LSQ+ Y+ K+L +++M+N P ++ L+ ++ TP S++G LMY MLCTRPD+ AV I+SRY S + W +K +L+
Subjt: LSQATYIDKMLVRYSMQNSKKGLLPFRHGVH---LSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILK
Query: YLRRTRDYMHVYG---AKDLILTGYTDSDFQTDKDSRKSTSGSVFTL-NGGAVVWHNIKQGCIANSTMEAD
YL+ T D ++ A + + GY DSD+ + RKST+G +F + + + W+ +Q +A S+ EA+
Subjt: YLRRTRDYMHVYG---AKDLILTGYTDSDFQTDKDSRKSTSGSVFTL-NGGAVVWHNIKQGCIANSTMEAD
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| P0CV72 Secreted RxLR effector protein 161 | 6.8e-21 | 43.59 | Show/hide |
Query: MRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKYLRRTRDY-MHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGA
M+ + Y S VG++MY M+ TRPD+ AV ++S++ S+P HW A+K +L+YL+ T+ Y + A L GY+D+D+ D +SR+STSG +F LNGG
Subjt: MRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKYLRRTRDY-MHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGA
Query: VVWHNIKQGCIANSTME
V W + KQ +A S+ E
Subjt: VVWHNIKQGCIANSTME
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-40 | 49.4 | Show/hide |
Query: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
L LSQ YI+++L R++M+N+K P + LSK+ CP T +E +M ++ Y+S VGSLMYAM+CTRPDI +AV ++SR+ NPG +HW AVK IL+Y
Subjt: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
Query: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
LR T +G D IL GYTD+D D D+RKS++G +FT +GGA+ W + Q C+A ST EA+
Subjt: LRRTRDYMHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.4e-13 | 33.53 | Show/hide |
Query: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
L LSQ YI +L R +M +K P LS K + Y +VGSL Y + TRPDI YAV +S++ P +H A+K IL+Y
Subjt: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
Query: LRRTRDY-MHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
L T ++ + + L L Y+D+D+ DKD ST+G + L + W + KQ + S+ EA+
Subjt: LRRTRDY-MHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.6e-16 | 33.53 | Show/hide |
Query: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
L LSQ Y +L R +M +K P L+ K P + Y +VGSL Y + TRPD+ YAV +S+Y P DHW A+K +L+Y
Subjt: LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRILYASVVGSLMYAMLCTRPDICYAVRIISRYQSNPGLDHWTAVKIILKY
Query: LRRTRDY-MHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
L T D+ + + L L Y+D+D+ D D ST+G + L + W + KQ + S+ EA+
Subjt: LRRTRDY-MHVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWHNIKQGCIANSTMEAD
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