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Cmc03g0060791 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0060791
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionEnzymatic polyprotein
Genome locationCMiso1.1chr03:1049470..1049880
RNA-Seq ExpressionCmc03g0060791
SyntenyCmc03g0060791
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038027.1 Enzymatic polyprotein [Cucumis melo var. makuwa]7.7e-5478.91Show/hide
Query:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP
        M FGLKNAPSEFQKIMNDIFN++Q+FTIVY+DDVL+FS T+DQHFKHL +F+N+IK+NGL+VS PK+KLFQTK+RFLG++I+QGIIKPIQRSL+FVDKFP
Subjt:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP

Query:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT
        DEIQDKTQLQRFL CVNY+GDF +DL++
Subjt:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT

KAA0056776.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.3e-5378.91Show/hide
Query:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP
        M FGLKNAPSEFQKIMNDIFN++Q+FTIVY+DDVL+FS T+DQHFKHL +F+N+IK+NGL+VS PK+KLFQTK+RFLG++I+QGIIKPIQRSL+FVDKFP
Subjt:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP

Query:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT
        DEIQDKTQLQRFL CVNYIGDF ++L++
Subjt:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT

KAA0059217.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.3e-5378.91Show/hide
Query:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP
        M FGLKNAPSEFQKIMNDIFN++Q+FTIVY+DDVL+FS T+DQHFKHL +F+N+IK+NGL+VS PK+KLFQTK+RFLG++I+QGIIKPIQRSL+FVDKFP
Subjt:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP

Query:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT
        DEIQDKTQLQRFL CVNYIGDF ++L++
Subjt:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT

TYJ97599.1 Enzymatic polyprotein [Cucumis melo var. makuwa]3.5e-5479.69Show/hide
Query:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP
        M FGLKNAPSEFQKIMNDIFN++Q+FTIVY+DDVL+FS T+DQHFKHL +F+N+IK+NGL+VS PK+KLFQTK+RFLG++I+QGIIKPIQRSL+FVDKFP
Subjt:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP

Query:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT
        DEIQDKTQLQRFL CVNYIGDF +DL++
Subjt:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT

TYJ98087.1 Enzymatic polyprotein [Cucumis melo var. makuwa]2.2e-5378.91Show/hide
Query:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP
        M FGLKNAPSEFQKIMNDIFN++Q+FTIVY+DDVL+FS T+DQHFKHL +F+N+IK+NGL+VS PK+KLFQTK+RFLG++I+QGIIKPIQRSL+FVDKFP
Subjt:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP

Query:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT
        D IQDKTQLQRFL CVNYIGDF +DL++
Subjt:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT

TrEMBL top hitse value%identityAlignment
A0A5A7T8U9 Enzymatic polyprotein3.7e-5478.91Show/hide
Query:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP
        M FGLKNAPSEFQKIMNDIFN++Q+FTIVY+DDVL+FS T+DQHFKHL +F+N+IK+NGL+VS PK+KLFQTK+RFLG++I+QGIIKPIQRSL+FVDKFP
Subjt:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP

Query:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT
        DEIQDKTQLQRFL CVNY+GDF +DL++
Subjt:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT

A0A5A7UR29 Enzymatic polyprotein6.4e-5478.91Show/hide
Query:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP
        M FGLKNAPSEFQKIMNDIFN++Q+FTIVY+DDVL+FS T+DQHFKHL +F+N+IK+NGL+VS PK+KLFQTK+RFLG++I+QGIIKPIQRSL+FVDKFP
Subjt:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP

Query:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT
        DEIQDKTQLQRFL CVNYIGDF ++L++
Subjt:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT

A0A5A7UX67 Enzymatic polyprotein6.4e-5478.91Show/hide
Query:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP
        M FGLKNAPSEFQKIMNDIFN++Q+FTIVY+DDVL+FS T+DQHFKHL +F+N+IK+NGL+VS PK+KLFQTK+RFLG++I+QGIIKPIQRSL+FVDKFP
Subjt:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP

Query:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT
        DEIQDKTQLQRFL CVNYIGDF ++L++
Subjt:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT

A0A5D3BEY3 Enzymatic polyprotein1.7e-5479.69Show/hide
Query:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP
        M FGLKNAPSEFQKIMNDIFN++Q+FTIVY+DDVL+FS T+DQHFKHL +F+N+IK+NGL+VS PK+KLFQTK+RFLG++I+QGIIKPIQRSL+FVDKFP
Subjt:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP

Query:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT
        DEIQDKTQLQRFL CVNYIGDF +DL++
Subjt:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT

A0A5D3BG41 Enzymatic polyprotein1.1e-5378.91Show/hide
Query:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP
        M FGLKNAPSEFQKIMNDIFN++Q+FTIVY+DDVL+FS T+DQHFKHL +F+N+IK+NGL+VS PK+KLFQTK+RFLG++I+QGIIKPIQRSL+FVDKFP
Subjt:  MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFP

Query:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT
        D IQDKTQLQRFL CVNYIGDF +DL++
Subjt:  DEIQDKTQLQRFLVCVNYIGDFNKDLQT

SwissProt top hitse value%identityAlignment
P03554 Enzymatic polyprotein2.5e-2342.5Show/hide
Query:  FGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFPDE
        FGLK APS FQ+ M++ F   + F  VY+DD+L+FS   + H  H+ M +     +G+++S  K +LF+ K+ FLG +ID+G  KP    L+ ++KFPD 
Subjt:  FGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFPDE

Query:  IQDKTQLQRFLVCVNYIGDF
        ++DK QLQRFL  + Y  D+
Subjt:  IQDKTQLQRFLVCVNYIGDF

P03555 Enzymatic polyprotein2.5e-2342.5Show/hide
Query:  FGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFPDE
        FGLK APS FQ+ M++ F   + F  VY+DD+L+FS   + H  H+ M +     +G+++S  K +LF+ K+ FLG +ID+G  KP    L+ ++KFPD 
Subjt:  FGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFPDE

Query:  IQDKTQLQRFLVCVNYIGDF
        ++DK QLQRFL  + Y  D+
Subjt:  IQDKTQLQRFLVCVNYIGDF

P03556 Enzymatic polyprotein2.5e-2342.5Show/hide
Query:  FGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFPDE
        FGLK APS FQ+ M++ F   + F  VY+DD+L+FS   + H  H+ M +     +G+++S  K +LF+ K+ FLG +ID+G  KP    L+ ++KFPD 
Subjt:  FGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFPDE

Query:  IQDKTQLQRFLVCVNYIGDF
        ++DK QLQRFL  + Y  D+
Subjt:  IQDKTQLQRFLVCVNYIGDF

Q00962 Enzymatic polyprotein4.3e-2341.13Show/hide
Query:  FGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFPDE
        FGLK APS FQ+ M++ F   + F  VY+DD+++FS   + H  H+ M +     +G+++S  K +LF+ K+ FLG +ID+G  KP    L+ ++KFPD 
Subjt:  FGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFPDE

Query:  IQDKTQLQRFLVCVNYIGDFNKDL
        ++DK QLQRFL  + Y  D+  +L
Subjt:  IQDKTQLQRFLVCVNYIGDFNKDL

Q02964 Enzymatic polyprotein2.5e-2342.5Show/hide
Query:  FGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFPDE
        FGLK APS FQ+ M++ F   + F  VY+DD+L+FS   + H  H+ M +     +G+++S  K +LF+ K+ FLG +ID+G  KP    L+ ++KFPD 
Subjt:  FGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFPDE

Query:  IQDKTQLQRFLVCVNYIGDF
        ++DK QLQRFL  + Y  D+
Subjt:  IQDKTQLQRFLVCVNYIGDF

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTCGGTCTTAAGAATGCTCCATCAGAGTTTCAAAAGATCATGAATGATATTTTCAATAAGCATCAGGACTTCACAATAGTTTACCTTGATGATGTTTTG
ATATTTTCTGAAACTATTGATCAACATTTTAAACATTTAAATATGTTCATTAATATCATTAAAACAAATGGCCTTATGGTATCTCTGCCTAAGGTTAAGTTGTTT
CAAACAAAGGTAAGGTTTCTTGGATTTGATATTGATCAAGGAATCATTAAACCTATCCAAAGATCATTGGACTTTGTGGATAAATTTCCTGATGAAATCCAGGAT
AAAACCCAATTACAGAGATTTCTTGTGTGCGTCAATTATATCGGAGACTTTAATAAAGACCTCCAGACATTTGTCTGCCACTTTATGACACACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATTCGGTCTTAAGAATGCTCCATCAGAGTTTCAAAAGATCATGAATGATATTTTCAATAAGCATCAGGACTTCACAATAGTTTACCTTGATGATGTTTTG
ATATTTTCTGAAACTATTGATCAACATTTTAAACATTTAAATATGTTCATTAATATCATTAAAACAAATGGCCTTATGGTATCTCTGCCTAAGGTTAAGTTGTTT
CAAACAAAGGTAAGGTTTCTTGGATTTGATATTGATCAAGGAATCATTAAACCTATCCAAAGATCATTGGACTTTGTGGATAAATTTCCTGATGAAATCCAGGAT
AAAACCCAATTACAGAGATTTCTTGTGTGCGTCAATTATATCGGAGACTTTAATAAAGACCTCCAGACATTTGTCTGCCACTTTATGACACACTAA
Protein sequenceShow/hide protein sequence
MSFGLKNAPSEFQKIMNDIFNKHQDFTIVYLDDVLIFSETIDQHFKHLNMFINIIKTNGLMVSLPKVKLFQTKVRFLGFDIDQGIIKPIQRSLDFVDKFPDEIQD
KTQLQRFLVCVNYIGDFNKDLQTFVCHFMTH