| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0050251.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.6e-84 | 85.13 | Show/hide |
Query: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
MFSRLS SFSSPQPFFTDTS++LFP SES L ELAQSAPTSA S+QSS+ DD EPTPDTPP STRVREP QDYHCF TI+SLVE TSYQEA
Subjt: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
Query: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
STDPLWQKAMNDELQAL+KTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA GYSQEYGIDYEETFAPVARMTSVRSLL +AAAKQ
Subjt: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
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| KAA0056932.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.9e-82 | 83.59 | Show/hide |
Query: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
MFSRLS SFSSPQ FFTDTS++LFPLSEST ELAQSAPTSA S+QSS+SD +P PD PP STRVREP QDYHCF TIVSL+EPTSYQEA
Subjt: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
Query: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
STDPLWQKAMNDELQAL+K HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA GYSQEYGIDYEETFAPVARMTSVRSLL +AAAKQ
Subjt: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
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| KAA0064888.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.9e-83 | 83.59 | Show/hide |
Query: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
MFSRLS SFSSPQPFFTDTS++LFP SES + ELAQSAPTSA SNQSS+S EPTPDTPP STRVREP QDYHCF TI+SLVEPTSYQEA
Subjt: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
Query: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
S +P+WQKAMNDELQAL+KTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA GYSQEYGIDYEETFAPVARMTSVRSLL +AAAKQ
Subjt: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
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| TYJ98155.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.1e-85 | 85.64 | Show/hide |
Query: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
MFSRLS SFSSPQPFFTDTS++LFP SES L ELAQSAPTSA S+QSS+ DD EPTPDTPP STRVREP QDYHCF TI+SLVEPTSYQEA
Subjt: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
Query: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
STDPLWQKAMNDELQAL+KTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA GYSQEYGIDYEETFAPVARMTSVRSLL +AAAKQ
Subjt: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
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| TYK19656.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.9e-82 | 83.59 | Show/hide |
Query: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
MFSRLS SFSSPQ FFTDTS++LFPLSEST ELAQSAPTSA S+QSS+SD +P PD PP STRVREP QDYHCF TIVSL+EPTSYQEA
Subjt: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
Query: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
STDPLWQKAMNDELQAL+K HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA GYSQEYGIDYEETFAPVARMTSVRSLL +AAAKQ
Subjt: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U9P9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.7e-84 | 85.13 | Show/hide |
Query: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
MFSRLS SFSSPQPFFTDTS++LFP SES L ELAQSAPTSA S+QSS+ DD EPTPDTPP STRVREP QDYHCF TI+SLVE TSYQEA
Subjt: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
Query: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
STDPLWQKAMNDELQAL+KTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA GYSQEYGIDYEETFAPVARMTSVRSLL +AAAKQ
Subjt: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
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| A0A5A7VBA1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-83 | 83.59 | Show/hide |
Query: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
MFSRLS SFSSPQPFFTDTS++LFP SES + ELAQSAPTSA SNQSS+S EPTPDTPP STRVREP QDYHCF TI+SLVEPTSYQEA
Subjt: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
Query: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
S +P+WQKAMNDELQAL+KTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA GYSQEYGIDYEETFAPVARMTSVRSLL +AAAKQ
Subjt: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
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| A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.0e-83 | 83.59 | Show/hide |
Query: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
MFSRLS SFSSPQ FFTDTS++LFPLSEST ELAQSAPTSA S+QSS+SD +P PD PP STRVREP QDYHCF TIVSL+EPTSYQEA
Subjt: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
Query: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
STDPLWQKAMNDELQAL+K HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA GYSQEYGIDYEETFAPVARMTSVRSLL +AAAKQ
Subjt: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
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| A0A5D3BI36 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-85 | 85.64 | Show/hide |
Query: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
MFSRLS SFSSPQPFFTDTS++LFP SES L ELAQSAPTSA S+QSS+ DD EPTPDTPP STRVREP QDYHCF TI+SLVEPTSYQEA
Subjt: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
Query: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
STDPLWQKAMNDELQAL+KTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA GYSQEYGIDYEETFAPVARMTSVRSLL +AAAKQ
Subjt: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
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| A0A5D3D7V8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.0e-83 | 83.59 | Show/hide |
Query: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
MFSRLS SFSSPQ FFTDTS++LFPLSEST ELAQSAPTSA S+QSS+SD +P PD PP STRVREP QDYHCF TIVSL+EPTSYQEA
Subjt: MFSRLS----SFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREP---TQDYHCFFTIVSLVEPTSYQEA
Query: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
STDPLWQKAMNDELQAL+K HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVA GYSQEYGIDYEETFAPVARMTSVRSLL +AAAKQ
Subjt: STDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAAKQ
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.4e-16 | 46.99 | Show/hide |
Query: WQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLL
W++A+N EL A +TW P K + +W++ +K + G RYKARLVA G++Q+Y IDYEETFAPVAR++S R +L
Subjt: WQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.1e-20 | 35.59 | Show/hide |
Query: PTSANSNQSSVSDDGSEP------------------------TPDTPPCCSTRVREPTQDYHC--FFTIVSLVEPTSYQEASTDP---LWQKAMNDELQA
PTSA S VS+ G +P P S R R ++ Y + I EP S +E + P KAM +E+++
Subjt: PTSANSNQSSVSDDGSEP------------------------TPDTPPCCSTRVREPTQDYHC--FFTIVSLVEPTSYQEASTDP---LWQKAMNDELQA
Query: LDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAA
L K T+ V+LP GKRP+ CKW++K+K D + RYKARLV G+ Q+ GID++E F+PV +MTS+R++L +AA+
Subjt: LDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIAAA
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.1e-21 | 45.45 | Show/hide |
Query: YHCFFTIVSLVEPTSYQEASTDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARM
Y T EP S A DP W +AM +EL AL + TW V P + +GCKW++K K HSDGT++R KARLVA G+ QE GI + ET++PV R
Subjt: YHCFFTIVSLVEPTSYQEASTDPLWQKAMNDELQALDKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARM
Query: TSVRSLLVIA
++R++L +A
Subjt: TSVRSLLVIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.2e-21 | 36.67 | Show/hide |
Query: SSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREPTQDYHCFFTIVSLVEPTSYQEASTDPLWQKAMND
SS SSP P + +S P S L A N+NQ+ ++ T + +P Y ++ + EP + +A D W+ AM
Subjt: SSFSSPQPFFTDTSVELFPLSESTLDTELAQSAPTSANSNQSSVSDDGSEPTPDTPPCCSTRVREPTQDYHCFFTIVSLVEPTSYQEASTDPLWQKAMND
Query: ELQALDKTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIA
E+ A HTWD V PP I GC+WI+ K +SDG++ RYKARLVA GY+Q G+DY ETF+PV + TS+R +L +A
Subjt: ELQALDKTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIA
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.2e-21 | 36.07 | Show/hide |
Query: PLSESTLDTELAQSAPTS-ANSNQSSVSDDGSEPTPDTPPC----------------CSTR----VREPTQDYHCFFTIVSLVEPTSYQEASTDPLWQKA
PL +S + + + TS + N S S + P P P +TR +R+P Q Y ++ + EP + +A D W++A
Subjt: PLSESTLDTELAQSAPTS-ANSNQSSVSDDGSEPTPDTPPC----------------CSTR----VREPTQDYHCFFTIVSLVEPTSYQEASTDPLWQKA
Query: MNDELQALDKTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIA
M E+ A HTWD V PP I GC+WI+ K +SDG++ RYKARLVA GY+Q G+DY ETF+PV + TS+R +L +A
Subjt: MNDELQALDKTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIERYKARLVANGYSQEYGIDYEETFAPVARMTSVRSLLVIA
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