| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0040169.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 4.7e-57 | 80.27 | Show/hide |
Query: RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQ
RKLFQVLTKTELYINPKKCTFL KEIVFL FLIKE KIGME KKVEA+ +W PTS+KEVQAFLGL SFYRRF FSSIVAPLT+CL+KGNFK + +QQ
Subjt: RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQ
Query: ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPI
+SFEEIKRRLTSSPILQLP+FASPFEV +DA RIGA+LSQQ HPI
Subjt: ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPI
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| KAA0056582.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | 2.5e-90 | 98.31 | Show/hide |
Query: RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQ
RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYR FTINFSSIVAPLTECLEKGNFKRDQIQQ
Subjt: RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQ
Query: ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALKQ
ESFEEIKRRLTSSPILQLPNFAS FEVAVDACRTRIGAVLSQQGHPIEYF EKLSSSRQSWSTYEQELYALVQALKQ
Subjt: ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALKQ
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| KAA0062943.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] | 8.0e-73 | 81.92 | Show/hide |
Query: RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQ
RKLFQVL + ELYINPKKCTFL KEIVFL FLIKEGKIGMEPKKVEAI +W PTSIKEVQAFLGLASFY+RF NFSSIV PLT+ L+K NFK + +QQ
Subjt: RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQ
Query: ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALKQ
+SFEEIKRRLTSSPILQLP+F SPFEV VDAC IG VLSQQGHPIEYF EKLS+SRQSWSTYEQELYALV+ALKQ
Subjt: ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALKQ
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| TYK16437.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 4.7e-57 | 80.27 | Show/hide |
Query: RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQ
RKLFQVLTKTELYINPKKCTFL KEIVFL FLIKE KIGME KKVEA+ +W PTS+KEVQAFLGL SFYRRF FSSIVAPLT+CL+KGNFK + +QQ
Subjt: RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQ
Query: ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPI
+SFEEIKRRLTSSPILQLP+FASPFEV +DA RIGA+LSQQ HPI
Subjt: ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPI
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| TYK23247.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 4.3e-58 | 85.51 | Show/hide |
Query: MEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAV
MEPKKVEAIHTW PT IKEVQAFLGLASFY++F NFSSIVAPLT+CL+KGNFK DQ QQESFE+IKRR TSSPILQLP+FASPFEV VDAC T IGAV
Subjt: MEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAV
Query: LSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALKQ
LSQQGHPI+YF EKLSSSRQSWSTYEQELYALV+ALKQ
Subjt: LSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALKQ
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TFY2 Putative gag-pol polyprotein | 2.3e-57 | 80.27 | Show/hide |
Query: RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQ
RKLFQVLTKTELYINPKKCTFL KEIVFL FLIKE KIGME KKVEA+ +W PTS+KEVQAFLGL SFYRRF FSSIVAPLT+CL+KGNFK + +QQ
Subjt: RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQ
Query: ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPI
+SFEEIKRRLTSSPILQLP+FASPFEV +DA RIGA+LSQQ HPI
Subjt: ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPI
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| A0A5A7UL80 DNA/RNA polymerases superfamily protein | 1.2e-90 | 98.31 | Show/hide |
Query: RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQ
RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYR FTINFSSIVAPLTECLEKGNFKRDQIQQ
Subjt: RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQ
Query: ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALKQ
ESFEEIKRRLTSSPILQLPNFAS FEVAVDACRTRIGAVLSQQGHPIEYF EKLSSSRQSWSTYEQELYALVQALKQ
Subjt: ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALKQ
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| A0A5A7V4G7 Retrovirus-related Pol polyprotein from transposon 17.6 | 3.9e-73 | 81.92 | Show/hide |
Query: RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQ
RKLFQVL + ELYINPKKCTFL KEIVFL FLIKEGKIGMEPKKVEAI +W PTSIKEVQAFLGLASFY+RF NFSSIV PLT+ L+K NFK + +QQ
Subjt: RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQ
Query: ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALKQ
+SFEEIKRRLTSSPILQLP+F SPFEV VDAC IG VLSQQGHPIEYF EKLS+SRQSWSTYEQELYALV+ALKQ
Subjt: ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALKQ
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| A0A5D3CX12 Putative gag-pol polyprotein | 2.3e-57 | 80.27 | Show/hide |
Query: RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQ
RKLFQVLTKTELYINPKKCTFL KEIVFL FLIKE KIGME KKVEA+ +W PTS+KEVQAFLGL SFYRRF FSSIVAPLT+CL+KGNFK + +QQ
Subjt: RKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQ
Query: ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPI
+SFEEIKRRLTSSPILQLP+FASPFEV +DA RIGA+LSQQ HPI
Subjt: ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPI
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| A0A5D3DHV3 Putative gag-pol polyprotein | 2.1e-58 | 85.51 | Show/hide |
Query: MEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAV
MEPKKVEAIHTW PT IKEVQAFLGLASFY++F NFSSIVAPLT+CL+KGNFK DQ QQESFE+IKRR TSSPILQLP+FASPFEV VDAC T IGAV
Subjt: MEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAV
Query: LSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALKQ
LSQQGHPI+YF EKLSSSRQSWSTYEQELYALV+ALKQ
Subjt: LSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALKQ
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.6e-31 | 40.68 | Show/hide |
Query: LFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQE-
+F+ L K L + KC FLK+E FL ++ I P+K+EAI + +PT KE++AFLGL +YR+F NF+ I P+T+CL+K N K D E
Subjt: LFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKGNFKRDQIQQE-
Query: --SFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALK
+F+++K ++ PIL++P+F F + DA +GAVLSQ GHP+ Y L+ ++ST E+EL A+V A K
Subjt: --SFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALK
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 7.9e-23 | 32.8 | Show/hide |
Query: LFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECL--EKGNFKR-----
+ + L + ++ +K F K+ + +L F++ + +P+KV+AI + P + +V++FLGLAS+YR F +F++I P+T+ L E G+ +
Subjt: LFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECL--EKGNFKR-----
Query: -----DQIQQESFEEIKRRLTSSP-ILQLPNFASPFEVAVDACRTRIGAVLSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQAL
++ Q+ +F+ ++ L S IL+ P+F PF++ DA + IGAVLSQ+G PI L Q+++T E+EL A+V AL
Subjt: -----DQIQQESFEEIKRRLTSSP-ILQLPNFASPFEVAVDACRTRIGAVLSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQAL
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 7.4e-29 | 39.38 | Show/hide |
Query: MIFSYTATTMKNIFSRKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLT
+IFS + T N + +F L L + KC FLKKE FL ++ I P KV+AI ++ +PT KE++AFLGL +YR+F N++ I P+T
Subjt: MIFSYTATTMKNIFSRKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLT
Query: ECLEKGNFKRDQIQQ--ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALK
CL+K Q + E+FE++K + PILQLP+F F + DA +GAVLSQ GHPI + L+ ++S E+EL A+V A K
Subjt: ECLEKGNFKRDQIQQ--ESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALK
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| P21414 Gag-Pol polyprotein | 2.2e-17 | 30.22 | Show/hide |
Query: SRKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKG-NFKRDQI
++KL Q L+K ++ KK ++E+ +L +L+KEGK + P + + VPT+ ++V+ FLG A F R + F+S+ APL ++ F +
Subjt: SRKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKG-NFKRDQI
Query: QQESFEEIKRRLTSSPILQLPNFASPFEVAVD----ACRTRIGAVLSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALK
Q++F+ IK+ L S+P L LP+ PF + +D R + L P+ Y +KL W T + + A+ LK
Subjt: QQESFEEIKRRLTSSPILQLPNFASPFEVAVD----ACRTRIGAVLSQQGHPIEYFGEKLSSSRQSWSTYEQELYALVQALK
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 1.2e-23 | 35 | Show/hide |
Query: TTMKNIFSRKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKG-
T KN+ R + L+K L +N +K FL ++ FL +++ I +PKKV AI PTS+KE++ FLG+ S+YR+F +++ + PLT L +G
Subjt: TTMKNIFSRKLFQVLTKTELYINPKKCTFLKKEIVFLRFLIKEGKIGMEPKKVEAIHTWRVPTSIKEVQAFLGLASFYRRFTINFSSIVAPLTECLEKG-
Query: --NFKR----------DQIQQESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQ----QGHPIEYFGEKLSSSRQSWSTYEQELYALVQAL
N K D+ +SF ++K L SS IL P F PF + DA IGAVLSQ + PI Y L+ + ++++T E+E+ A++ +L
Subjt: --NFKR----------DQIQQESFEEIKRRLTSSPILQLPNFASPFEVAVDACRTRIGAVLSQ----QGHPIEYFGEKLSSSRQSWSTYEQELYALVQAL
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