; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0061741 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0061741
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionsister chromatid cohesion 1 protein 2 isoform X1
Genome locationCMiso1.1chr03:1915195..1917353
RNA-Seq ExpressionCmc03g0061741
SyntenyCmc03g0061741
Gene Ontology termsGO:0007062 - sister chromatid cohesion (biological process)
GO:1990414 - replication-born double-strand break repair via sister chromatid exchange (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008278 - cohesin complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
InterPro domainsIPR006909 - Rad21/Rec8-like protein, C-terminal, eukaryotic
IPR023093 - ScpA-like, C-terminal
IPR036390 - Winged helix DNA-binding domain superfamily
IPR039781 - Rad21/Rec8-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056598.1 sister chromatid cohesion 1 protein 2 isoform X2 [Cucumis melo var. makuwa]5.8e-12999.18Show/hide
Query:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP
        MPLMSCVSPELRSLFET VNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP
Subjt:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP

Query:  QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYE
        QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYE
Subjt:  QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYE

Query:  ILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED
        ILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIM ED
Subjt:  ILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED

XP_008441365.1 PREDICTED: sister chromatid cohesion 1 protein 2 isoform X1 [Cucumis melo]1.4e-12798.77Show/hide
Query:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP
        MPLMSCVSPELRSLFET VNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP
Subjt:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP

Query:  QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNA-IKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFY
        QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNA IKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFY
Subjt:  QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNA-IKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFY

Query:  EILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED
        EILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIM ED
Subjt:  EILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED

XP_008441366.1 PREDICTED: sister chromatid cohesion 1 protein 2 isoform X2 [Cucumis melo]5.8e-12999.18Show/hide
Query:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP
        MPLMSCVSPELRSLFET VNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP
Subjt:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP

Query:  QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYE
        QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYE
Subjt:  QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYE

Query:  ILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED
        ILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIM ED
Subjt:  ILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED

XP_011656378.1 sister chromatid cohesion 1 protein 2 isoform X2 [Cucumis sativus]2.2e-11590.98Show/hide
Query:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSI-ATYRSEQITTCVDRVAVSEASVLELSTSE
        MPLMSCVSPELRSL  T VNISKSTE +KSPENLDVPSS AFHTLVK DSPVT F+TGEHSNE +ISGSI ATYRSEQITTCVDRVAVSEASV ELSTSE
Subjt:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSI-ATYRSEQITTCVDRVAVSEASVLELSTSE

Query:  PQISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFY
        PQISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKV N NAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQS +EAVNLSHLLSNKTRKESAGLFY
Subjt:  PQISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFY

Query:  EILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED
        EILVLKTK+CVDVKQDCAYGDILVWKL +W TAFGSGLSIM ED
Subjt:  EILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED

XP_016899384.1 PREDICTED: sister chromatid cohesion 1 protein 2 isoform X3 [Cucumis melo]1.4e-12798.77Show/hide
Query:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP
        MPLMSCVSPELRSLFET VNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP
Subjt:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP

Query:  QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNA-IKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFY
        QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNA IKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFY
Subjt:  QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNA-IKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFY

Query:  EILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED
        EILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIM ED
Subjt:  EILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED

TrEMBL top hitse value%identityAlignment
A0A0A0K7K5 Uncharacterized protein1.0e-11590.98Show/hide
Query:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSI-ATYRSEQITTCVDRVAVSEASVLELSTSE
        MPLMSCVSPELRSL  T VNISKSTE +KSPENLDVPSS AFHTLVK DSPVT F+TGEHSNE +ISGSI ATYRSEQITTCVDRVAVSEASV ELSTSE
Subjt:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSI-ATYRSEQITTCVDRVAVSEASVLELSTSE

Query:  PQISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFY
        PQISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKV N NAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQS +EAVNLSHLLSNKTRKESAGLFY
Subjt:  PQISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFY

Query:  EILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED
        EILVLKTK+CVDVKQDCAYGDILVWKL +W TAFGSGLSIM ED
Subjt:  EILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED

A0A1S3B388 sister chromatid cohesion 1 protein 2 isoform X17.0e-12898.77Show/hide
Query:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP
        MPLMSCVSPELRSLFET VNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP
Subjt:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP

Query:  QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNA-IKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFY
        QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNA IKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFY
Subjt:  QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNA-IKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFY

Query:  EILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED
        EILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIM ED
Subjt:  EILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED

A0A1S3B3X4 sister chromatid cohesion 1 protein 2 isoform X22.8e-12999.18Show/hide
Query:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP
        MPLMSCVSPELRSLFET VNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP
Subjt:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP

Query:  QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYE
        QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYE
Subjt:  QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYE

Query:  ILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED
        ILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIM ED
Subjt:  ILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED

A0A1S4DTR9 sister chromatid cohesion 1 protein 2 isoform X37.0e-12898.77Show/hide
Query:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP
        MPLMSCVSPELRSLFET VNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP
Subjt:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP

Query:  QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNA-IKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFY
        QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNA IKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFY
Subjt:  QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNA-IKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFY

Query:  EILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED
        EILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIM ED
Subjt:  EILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED

A0A5A7UND2 Sister chromatid cohesion 1 protein 2 isoform X22.8e-12999.18Show/hide
Query:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP
        MPLMSCVSPELRSLFET VNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP
Subjt:  MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEP

Query:  QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYE
        QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYE
Subjt:  QISDGLEQIAIAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYE

Query:  ILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED
        ILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIM ED
Subjt:  ILVLKTKDCVDVKQDCAYGDILVWKLSNWSTAFGSGLSIMGED

SwissProt top hitse value%identityAlignment
Q8W1Y0 Sister chromatid cohesion 1 protein 42.2e-0942.11Show/hide
Query:  LETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDILV
        LE  GWS RTR VA+Y LQ   ++  ++ +  +    LL+ KTRKE++ +F+E LVLKT+D + V+Q   Y  I++
Subjt:  LETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDILV

Q9FQ19 Sister chromatid cohesion 1 protein 33.4e-0741.43Show/hide
Query:  SGRTRMVAEYLLQNFTNQRIQSAEEA--VNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDI
        +GR R +A+YL Q  ++    S+  +  ++LS +L+ KTRK +A +F+E LVLK++  +D++QD  YGDI
Subjt:  SGRTRMVAEYLLQNFTNQRIQSAEEA--VNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDI

Q9FQ20 Sister chromatid cohesion 1 protein 26.3e-1737.21Show/hide
Query:  VAVSEASVLELSTSEPQISDGLEQIAIAPGTPVRCSTSARLFRSP-----------------DSPKV------------SNSNAIKFCEVDELETDGWSG
        V  SE +V+   T  P +S   EQ+ IAP TPVR S S R F+ P                 + P V             N   +   E  +L+ + WS 
Subjt:  VAVSEASVLELSTSEPQISDGLEQIAIAPGTPVRCSTSARLFRSP-----------------DSPKV------------SNSNAIKFCEVDELETDGWSG

Query:  RTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDILVWKLS
        RTR VA++L + F  QR +  EE V+L  L   +T+KESA LFYE LVLKTK  V+VKQ+  Y D+ + ++S
Subjt:  RTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDILVWKLS

Arabidopsis top hitse value%identityAlignment
AT3G59550.1 Rad21/Rec8-like family protein2.4e-0841.43Show/hide
Query:  SGRTRMVAEYLLQNFTNQRIQSAEEA--VNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDI
        +GR R +A+YL Q  ++    S+  +  ++LS +L+ KTRK +A +F+E LVLK++  +D++QD  YGDI
Subjt:  SGRTRMVAEYLLQNFTNQRIQSAEEA--VNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDI

AT5G16270.1 sister chromatid cohesion 1 protein 41.5e-1042.11Show/hide
Query:  LETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDILV
        LE  GWS RTR VA+Y LQ   ++  ++ +  +    LL+ KTRKE++ +F+E LVLKT+D + V+Q   Y  I++
Subjt:  LETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDILV

AT5G40840.1 Rad21/Rec8-like family protein7.6e-1836.26Show/hide
Query:  VAVSEASVLELSTSEPQISDGLEQIAIAPGTPVRCSTSARLFRSP----------------------------DSPKVSNSNAIKFCEVDELETDGWSGR
        V  SE +V+   T  P +S   EQ+ IAP TPVR S S R F+ P                            D   +  ++ +   E  +L+ + WS R
Subjt:  VAVSEASVLELSTSEPQISDGLEQIAIAPGTPVRCSTSARLFRSP----------------------------DSPKVSNSNAIKFCEVDELETDGWSGR

Query:  TRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDILVWKLS
        TR VA++L + F  QR +  EE V+L  L   +T+KESA LFYE LVLKTK  V+VKQ+  Y D+ + ++S
Subjt:  TRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDILVWKLS

AT5G40840.2 Rad21/Rec8-like family protein4.5e-1837.21Show/hide
Query:  VAVSEASVLELSTSEPQISDGLEQIAIAPGTPVRCSTSARLFRSP-----------------DSPKV------------SNSNAIKFCEVDELETDGWSG
        V  SE +V+   T  P +S   EQ+ IAP TPVR S S R F+ P                 + P V             N   +   E  +L+ + WS 
Subjt:  VAVSEASVLELSTSEPQISDGLEQIAIAPGTPVRCSTSARLFRSP-----------------DSPKV------------SNSNAIKFCEVDELETDGWSG

Query:  RTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDILVWKLS
        RTR VA++L + F  QR +  EE V+L  L   +T+KESA LFYE LVLKTK  V+VKQ+  Y D+ + ++S
Subjt:  RTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDILVWKLS

AT5G40840.3 Rad21/Rec8-like family protein4.5e-1837.21Show/hide
Query:  VAVSEASVLELSTSEPQISDGLEQIAIAPGTPVRCSTSARLFRSP-----------------DSPKV------------SNSNAIKFCEVDELETDGWSG
        V  SE +V+   T  P +S   EQ+ IAP TPVR S S R F+ P                 + P V             N   +   E  +L+ + WS 
Subjt:  VAVSEASVLELSTSEPQISDGLEQIAIAPGTPVRCSTSARLFRSP-----------------DSPKV------------SNSNAIKFCEVDELETDGWSG

Query:  RTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDILVWKLS
        RTR VA++L + F  QR +  EE V+L  L   +T+KESA LFYE LVLKTK  V+VKQ+  Y D+ + ++S
Subjt:  RTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGDILVWKLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTTGATGTCCTGTGTTTCGCCTGAGCTTAGGTCCCTTTTTGAAACCAGAGTGAATATATCAAAATCTACTGAACTGGTGAAATCTCCTGAAAACTTGGATGTTCC
AAGTTCTCCAGCTTTTCACACATTAGTGAAAATGGATAGCCCCGTAACAATTTTCAAAACTGGAGAACATTCAAATGAACCAGAGATTTCTGGATCTATAGCTACCTACA
GATCAGAGCAAATCACGACTTGTGTGGATAGAGTTGCCGTTTCTGAAGCTTCTGTCCTGGAGTTGTCCACATCAGAACCTCAAATTTCAGATGGACTCGAGCAAATAGCA
ATAGCACCTGGCACACCTGTTCGGTGCTCAACATCAGCTAGATTATTTAGGAGTCCAGATAGCCCTAAAGTTTCTAACTCGAATGCAATAAAGTTTTGTGAAGTGGATGA
ACTGGAAACCGATGGATGGTCTGGGAGAACCAGAATGGTTGCTGAATATCTTCTCCAAAATTTTACAAATCAACGGATACAGAGTGCGGAAGAGGCTGTAAATTTGTCCC
ATCTTCTAAGCAACAAAACGAGAAAAGAGAGTGCTGGTTTATTCTACGAAATATTGGTATTGAAAACCAAAGACTGTGTGGATGTGAAACAAGATTGTGCCTACGGTGAC
ATCTTAGTATGGAAACTATCAAACTGGAGCACAGCCTTTGGATCTGGTTTGTCTATCATGGGCGAAGACTAG
mRNA sequenceShow/hide mRNA sequence
GGAACTTAAGCGAAGCATATACGATGCTAGGGACTTGGTTTCAAAAAGAAGAAAATGTCCTTGTAGTGCTCTCACTGCCTGGAAGGCTAGTCAAATATCTAGACTCTCCT
TTGGCTTCTCAATGCCTTTGATGTCCTGTGTTTCGCCTGAGCTTAGGTCCCTTTTTGAAACCAGAGTGAATATATCAAAATCTACTGAACTGGTGAAATCTCCTGAAAAC
TTGGATGTTCCAAGTTCTCCAGCTTTTCACACATTAGTGAAAATGGATAGCCCCGTAACAATTTTCAAAACTGGAGAACATTCAAATGAACCAGAGATTTCTGGATCTAT
AGCTACCTACAGATCAGAGCAAATCACGACTTGTGTGGATAGAGTTGCCGTTTCTGAAGCTTCTGTCCTGGAGTTGTCCACATCAGAACCTCAAATTTCAGATGGACTCG
AGCAAATAGCAATAGCACCTGGCACACCTGTTCGGTGCTCAACATCAGCTAGATTATTTAGGAGTCCAGATAGCCCTAAAGTTTCTAACTCGAATGCAATAAAGTTTTGT
GAAGTGGATGAACTGGAAACCGATGGATGGTCTGGGAGAACCAGAATGGTTGCTGAATATCTTCTCCAAAATTTTACAAATCAACGGATACAGAGTGCGGAAGAGGCTGT
AAATTTGTCCCATCTTCTAAGCAACAAAACGAGAAAAGAGAGTGCTGGTTTATTCTACGAAATATTGGTATTGAAAACCAAAGACTGTGTGGATGTGAAACAAGATTGTG
CCTACGGTGACATCTTAGTATGGAAACTATCAAACTGGAGCACAGCCTTTGGATCTGGTTTGTCTATCATGGGCGAAGACTAGGTGTAGACTTGTAGAATAGAAATGGAA
TTAGTTTAGTTGTTTTTGTGTTCAATGTCTACAAAATCAGAGGTTAATGTTGATGTACAGTAACGCTATTAAGTTAAACTGTACGTGTCGGTGTTAAAAGCGGGGATAAT
TTTGATGTACATCAACTTCCTTGAGTTAACAGTCTATGTAGGAGTAGTTTTGATGCATAGACCGATGGTGGCTGTTATAGTGAACCTCTGACTTGTTATAATCTTTTCTT
CTAGAGGTAGATGTTGTAAACTCAAATTATATGTTTCTGGATTTTGTAATCCAAAAACATTGCAAATTTTGAAATGCTTTCATTA
Protein sequenceShow/hide protein sequence
MPLMSCVSPELRSLFETRVNISKSTELVKSPENLDVPSSPAFHTLVKMDSPVTIFKTGEHSNEPEISGSIATYRSEQITTCVDRVAVSEASVLELSTSEPQISDGLEQIA
IAPGTPVRCSTSARLFRSPDSPKVSNSNAIKFCEVDELETDGWSGRTRMVAEYLLQNFTNQRIQSAEEAVNLSHLLSNKTRKESAGLFYEILVLKTKDCVDVKQDCAYGD
ILVWKLSNWSTAFGSGLSIMGED