; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0062201 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0062201
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
Genome locationCMiso1.1chr03:2365774..2366841
RNA-Seq ExpressionCmc03g0062201
SyntenyCmc03g0062201
Gene Ontology termsGO:0006116 - NADH oxidation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005777 - peroxisome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003954 - NADH dehydrogenase activity (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031941.1 Beta-galactosidase [Cucumis melo var. makuwa]1.1e-16580.85Show/hide
Query:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG
        M SRIL+ QTPL+CLKESYPSTRL+ EVPLRVFGC AYVHNFGP QTKF PRAQACVFVGYPL+Q GYKCFH PS+KYFVTMDVTFCE+RPYF VSHL+G
Subjt:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG

Query:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ
        E++ EESN+TFEF+E T  TVSDID HPIILPTNQVP KTYY+RNLRKEV SPTSQPPA VQ+ +PPRDQGMENPTKPCTNNTM+END SD+ +LEN+E+
Subjt:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ

Query:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL
        KN  DETEVR ETSN+EAEQGHT KLD+YD S D+PIAL KGTRSCTKH I NYVSY+NLS QFR FTA+L+ST IPKNI+ ALE PEWKN VMEEMKAL
Subjt:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL

Query:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS
        EKN TWEICAL KGHK VGCKWVF+LKYKADGTLDRHK RLVAK FTQTYG+DYS
Subjt:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS

KAA0041457.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]7.6e-20297.75Show/hide
Query:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG
        M SRILY QTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG
Subjt:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG

Query:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ
        ESMREESNSTFEFIEHTPSTVSDID HPIILPTNQVPCKTYY+RNLRKEV+SPTSQ PASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ
Subjt:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ

Query:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL
        KN+GDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALE PEWKNVVMEEMKAL
Subjt:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL

Query:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS
        EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS
Subjt:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS

KAA0053629.1 Beta-galactosidase [Cucumis melo var. makuwa]2.3e-16681.41Show/hide
Query:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG
        M SRIL+ QTPL+CLKESYPSTRL+ EVPLRVFGC AYV+NFGP QTKF PRAQAC FVGYPL+QRGYKCFH PS+KYFVTMDVTFCE+RPYFSVSHL+G
Subjt:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG

Query:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ
        E++ EESNSTFEF+E T  TVSDID HPIILPTNQVP KTYY+RNLRKEV S TSQPPA VQD +PPRDQGMENPTKPCTNNTM+END SDV +LEN+E+
Subjt:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ

Query:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL
        KN  DETEVR ETSN+EAEQGHT KLD+YD S D+PIAL KGTRSCTKH I NYVSY+NLS QFR FTASL+ST IPKNI+ ALE PEWKN VMEE+KAL
Subjt:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL

Query:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS
        EKN TWEICAL KGHK VGCKWVF+LKYKADGTLDRHK RLVAK FTQTYG+DYS
Subjt:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS

KAA0054163.1 Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa]4.2e-16883.1Show/hide
Query:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG
        M SRIL+ QTPLECLKESYPSTRL+ EVPLRVFGCIAYVH+FGP QTKF PRA+ACVFVGYP +Q GYKCFH PS+KYFVTMDVTFCEDR YF VSHL+G
Subjt:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG

Query:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ
        ES+ EESN+TFEFIE TPSTVSDID HPIILPTNQVP KTYY+RNL KEV SPT+QPPA VQD +PPRDQGMENPT+P TNNTM+END SDV +LEN+E+
Subjt:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ

Query:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL
        KN+ DETEVR ETSN+EAEQGHT K D+YD S DLPIAL KGTRSCTKH ISNYVSYENLS QFR FTASL+STTIPKNI+IALE PEWKN VMEE+KAL
Subjt:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL

Query:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS
        EKNNTWEICAL KGHK VGCKWVFTLKYKADGTLDRHK RLVAK FTQTYGVDYS
Subjt:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS

KAA0067540.1 Beta-galactosidase [Cucumis melo var. makuwa]1.1e-16881.97Show/hide
Query:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG
        M SRIL+ QTPL+CLKESYPSTRL+ EVPLRVFGC AYVHNFGP QTKF PRAQACVFVGYPL+QRGYKCFH PS+KYFVTMDVTFCE+RPYF VSHL+G
Subjt:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG

Query:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ
        E++ EESNSTFEF+E TP TVSDID HPIILPTNQVP KTYY+RNLRK+VRSPTSQPPA +Q+ +PPRDQGMENPTKPCTNNTM+END SDV +LEN+E+
Subjt:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ

Query:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL
        KN  DETEVR ETSN+EAEQGHT KLD+YD S D+PIAL KGTRSCTKH I NYVSY+NLS QFR FTASL+ST IPKNI+ ALE PEWKN VMEEMKAL
Subjt:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL

Query:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS
        EKN TWEICAL KGHK VGCKWVF+LKYKADGTLDRHK RLVAK FTQTYG+DYS
Subjt:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS

TrEMBL top hitse value%identityAlignment
A0A5A7UDS7 Cysteine-rich RLK (RECEPTOR-like protein kinase) 82.0e-16883.1Show/hide
Query:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG
        M SRIL+ QTPLECLKESYPSTRL+ EVPLRVFGCIAYVH+FGP QTKF PRA+ACVFVGYP +Q GYKCFH PS+KYFVTMDVTFCEDR YF VSHL+G
Subjt:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG

Query:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ
        ES+ EESN+TFEFIE TPSTVSDID HPIILPTNQVP KTYY+RNL KEV SPT+QPPA VQD +PPRDQGMENPT+P TNNTM+END SDV +LEN+E+
Subjt:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ

Query:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL
        KN+ DETEVR ETSN+EAEQGHT K D+YD S DLPIAL KGTRSCTKH ISNYVSYENLS QFR FTASL+STTIPKNI+IALE PEWKN VMEE+KAL
Subjt:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL

Query:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS
        EKNNTWEICAL KGHK VGCKWVFTLKYKADGTLDRHK RLVAK FTQTYGVDYS
Subjt:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS

A0A5A7UJI9 Beta-galactosidase1.1e-16681.41Show/hide
Query:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG
        M SRIL+ QTPL+CLKESYPSTRL+ EVPLRVFGC AYV+NFGP QTKF PRAQAC FVGYPL+QRGYKCFH PS+KYFVTMDVTFCE+RPYFSVSHL+G
Subjt:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG

Query:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ
        E++ EESNSTFEF+E T  TVSDID HPIILPTNQVP KTYY+RNLRKEV S TSQPPA VQD +PPRDQGMENPTKPCTNNTM+END SDV +LEN+E+
Subjt:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ

Query:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL
        KN  DETEVR ETSN+EAEQGHT KLD+YD S D+PIAL KGTRSCTKH I NYVSY+NLS QFR FTASL+ST IPKNI+ ALE PEWKN VMEE+KAL
Subjt:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL

Query:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS
        EKN TWEICAL KGHK VGCKWVF+LKYKADGTLDRHK RLVAK FTQTYG+DYS
Subjt:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS

A0A5A7VK49 Beta-galactosidase5.3e-16981.97Show/hide
Query:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG
        M SRIL+ QTPL+CLKESYPSTRL+ EVPLRVFGC AYVHNFGP QTKF PRAQACVFVGYPL+QRGYKCFH PS+KYFVTMDVTFCE+RPYF VSHL+G
Subjt:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG

Query:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ
        E++ EESNSTFEF+E TP TVSDID HPIILPTNQVP KTYY+RNLRK+VRSPTSQPPA +Q+ +PPRDQGMENPTKPCTNNTM+END SDV +LEN+E+
Subjt:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ

Query:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL
        KN  DETEVR ETSN+EAEQGHT KLD+YD S D+PIAL KGTRSCTKH I NYVSY+NLS QFR FTASL+ST IPKNI+ ALE PEWKN VMEEMKAL
Subjt:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL

Query:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS
        EKN TWEICAL KGHK VGCKWVF+LKYKADGTLDRHK RLVAK FTQTYG+DYS
Subjt:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS

A0A5A7VLQ7 Beta-galactosidase5.5e-16680.85Show/hide
Query:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG
        M SRIL+ QTPL+CLKESYPSTRL+ EVPLRVFGC AYVHNFGP QTKF PRAQACVFVGYPL+Q GYKCFH PS+KYFVTMDVTFCE+RPYF VSHL+G
Subjt:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG

Query:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ
        E++ EESN+TFEF+E T  TVSDID HPIILPTNQVP KTYY+RNLRKEV SPTSQPPA VQ+ +PPRDQGMENPTKPCTNNTM+END SD+ +LEN+E+
Subjt:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ

Query:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL
        KN  DETEVR ETSN+EAEQGHT KLD+YD S D+PIAL KGTRSCTKH I NYVSY+NLS QFR FTA+L+ST IPKNI+ ALE PEWKN VMEEMKAL
Subjt:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL

Query:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS
        EKN TWEICAL KGHK VGCKWVF+LKYKADGTLDRHK RLVAK FTQTYG+DYS
Subjt:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS

A0A5D3DL41 Retrovirus-related Pol polyprotein from transposon TNT 1-943.7e-20297.75Show/hide
Query:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG
        M SRILY QTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG
Subjt:  MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKG

Query:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ
        ESMREESNSTFEFIEHTPSTVSDID HPIILPTNQVPCKTYY+RNLRKEV+SPTSQ PASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ
Subjt:  ESMREESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQ

Query:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL
        KN+GDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALE PEWKNVVMEEMKAL
Subjt:  KNNGDETEVRTETSNNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKAL

Query:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS
        EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS
Subjt:  EKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS

SwissProt top hitse value%identityAlignment
P04146 Copia protein4.7e-1326.32Show/hide
Query:  LRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPY------FSVSHLKGESMREESNSTFEFIEHTPSTVSD
        LRVFG   YVH    KQ KF+ ++   +FVGY  N  G+K +   ++K+ V  DV   E          F    LK    +E  N  F      P+    
Subjt:  LRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPY------FSVSHLKGESMREESNSTFEFIEHTPSTVSD

Query:  IDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTM--NENDNSDVIILENVEQKNNGDETEVRTETSNNEAEQG
         D+  II    + P ++    N++    S  S+      DS+        N +K C N     +  +++   + E+ ++K +    E +   + NE+ + 
Subjt:  IDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTM--NENDNSDVIILENVEQKNNGDETEVRTETSNNEAEQG

Query:  HTGK------LDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKN---IHIALESPEWKNVVMEEMKALEKNNTWEICALS
         T +      +D    +  + I   +  R  TK  IS   + E+ SL      A      +P +   I    +   W+  +  E+ A + NNTW I    
Subjt:  HTGK------LDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKN---IHIALESPEWKNVVMEEMKALEKNNTWEICALS

Query:  KGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDY
        +    V  +WVF++KY   G   R+K RLVA+ FTQ Y +DY
Subjt:  KGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDY

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-948.3e-1043.9Show/hide
Query:  PKNIHIALESPEWKNVVM----EEMKALEKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDY
        P+++   L  PE KN +M    EEM++L+KN T+++  L KG + + CKWVF LK   D  L R+K RLV K F Q  G+D+
Subjt:  PKNIHIALESPEWKNVVM----EEMKALEKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDY

P92520 Uncharacterized mitochondrial protein AtMg008201.4e-1245.78Show/hide
Query:  STTI---PKNIHIALESPEWKNVVMEEMKALEKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGV
        +TTI   PK++  AL+ P W   + EE+ AL +N TW +         +GCKWVF  K  +DGTLDR K RLVAK F Q  G+
Subjt:  STTI---PKNIHIALESPEWKNVVMEEMKALEKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGV

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.8e-1825.63Show/hide
Query:  LRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCED----RPYFSVSHLKGESMREES-----NSTFEFIEHTPST
        LRVFGC  Y       Q K + +++ CVF+GY L Q  Y C HL + + +++  V F E+      Y +      E  RE S     ++T          
Subjt:  LRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCED----RPYFSVSHLKGESMREES-----NSTFEFIEHTPST

Query:  VSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQKNNGDET------EVRTETS
         S  D H    P +         +     + S  S    S  +   PR  G +  T+P    T   +        +N  Q N  +E+       + T   
Subjt:  VSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQKNNGDET------EVRTETS

Query:  NNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENL-SLQFR------------DFTASLNSTTIPKNIHIALESPEWKNVVMEEMKALE
        ++ +    T       TS   P  L        +   +N  +  N  S+  R                SL + + P+    AL+   W+N +  E+ A  
Subjt:  NNEAEQGHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENL-SLQFR------------DFTASLNSTTIPKNIHIALESPEWKNVVMEEMKALE

Query:  KNNTWEICALSKGH-KYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS
         N+TW++      H   VGC+W+FT KY +DG+L+R+K RLVAK + Q  G+DY+
Subjt:  KNNTWEICALSKGH-KYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.1e-1723.59Show/hide
Query:  ILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCED-RPYFSVSHLKGESM
        +L  Q+P + L    P+        L+VFGC  Y       + K   +++ C F+GY L Q  Y C H+P+ + + +  V F E   P+ + +     S 
Subjt:  ILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCED-RPYFSVSHLKGESM

Query:  REESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSP----TSQPPASVQDSKPPRDQGMENPTKPCTN---------NTMNENDNS
         + S+S   +  HT      + T P++LP    PC   +     +   SP    T+Q  +S   S          PT P  N          T N N NS
Subjt:  REESNSTFEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSP----TSQPPASVQDSKPPRDQGMENPTKPCTN---------NTMNENDNS

Query:  DVIILENVEQKNNGDETEVRTETSNNEAEQG--HTGKLDKYDTSFDLPIALGKGTRS------------CTKHFISNYVSYENLSLQFRD----------
         ++         N +     +   N+   Q    +  +    TS   P +    + S              +      V+  +++ + +D          
Subjt:  DVIILENVEQKNNGDETEVRTETSNNEAEQG--HTGKLDKYDTSFDLPIALGKGTRS------------CTKHFISNYVSYENLSLQFRD----------

Query:  FTASLNSTTIPKNIHIALESPEWKNVVMEEMKALEKNNTWEIC-ALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS
        +  SL + + P+    A++   W+  +  E+ A   N+TW++          VGC+W+FT K+ +DG+L+R+K RLVAK + Q  G+DY+
Subjt:  FTASLNSTTIPKNIHIALESPEWKNVVMEEMKALEKNNTWEIC-ALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGVDYS

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.8e-2040.91Show/hide
Query:  SCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKALEKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAK
        S T H IS ++SYE +S  +  F   +     P   + A E   W   + +E+ A+E  +TWEIC L    K +GCKWV+ +KY +DGT++R+K RLVAK
Subjt:  SCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKALEKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAK

Query:  RFTQTYGVDY
         +TQ  G+D+
Subjt:  RFTQTYGVDY

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)9.7e-1445.78Show/hide
Query:  STTI---PKNIHIALESPEWKNVVMEEMKALEKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGV
        +TTI   PK++  AL+ P W   + EE+ AL +N TW +         +GCKWVF  K  +DGTLDR K RLVAK F Q  G+
Subjt:  STTI---PKNIHIALESPEWKNVVMEEMKALEKNNTWEICALSKGHKYVGCKWVFTLKYKADGTLDRHKTRLVAKRFTQTYGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTCGTATCCTCTACTTTCAGACCCCCTTAGAATGTCTTAAGGAGTCCTACCCCTCTACTCGTCTTATTTTAGAGGTTCCTCTTCGTGTGTTTGGGTGTATTGC
TTATGTCCATAATTTTGGCCCTAAACAGACCAAATTTAACCCTCGAGCTCAGGCTTGTGTGTTTGTTGGGTATCCCCTGAACCAACGCGGTTATAAATGTTTTCACCTGC
CGTCCAAGAAATACTTTGTTACTATGGATGTTACTTTCTGTGAGGACCGACCATATTTTTCCGTTAGCCATCTTAAGGGGGAGAGTATGAGGGAAGAGTCTAATAGCACC
TTTGAATTTATCGAACATACTCCTAGTACTGTGTCTGACATTGATACTCACCCTATAATCCTACCCACAAACCAAGTCCCTTGTAAAACATATTACAAGAGAAATCTTAG
AAAGGAAGTCAGGTCCCCTACTAGTCAGCCGCCGGCTTCAGTCCAAGACTCCAAACCTCCTCGAGATCAAGGTATGGAAAATCCTACTAAACCTTGTACTAATAATACAA
TGAATGAGAATGACAATTCTGATGTTATTATTCTTGAAAATGTGGAACAAAAGAACAATGGTGATGAGACTGAGGTCAGAACAGAAACTAGTAACAATGAAGCTGAACAG
GGTCATACAGGGAAACTTGACAAGTATGATACTTCTTTTGATCTTCCTATTGCATTAGGAAAAGGTACTAGGTCTTGTACAAAGCATTTCATATCTAATTATGTGTCATA
CGAGAATCTCTCACTACAGTTCAGAGATTTTACTGCCAGCCTTAACTCTACCACAATACCGAAAAATATTCATATTGCTTTAGAGAGTCCTGAATGGAAGAATGTTGTCA
TGGAAGAGATGAAAGCTCTGGAAAAGAATAACACTTGGGAGATTTGTGCTCTATCTAAGGGACACAAGTATGTAGGATGCAAATGGGTGTTCACTCTCAAATACAAAGCA
GATGGAACACTTGACAGACACAAGACAAGATTAGTTGCAAAAAGATTTACTCAGACCTATGGTGTTGATTATTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTCGTATCCTCTACTTTCAGACCCCCTTAGAATGTCTTAAGGAGTCCTACCCCTCTACTCGTCTTATTTTAGAGGTTCCTCTTCGTGTGTTTGGGTGTATTGC
TTATGTCCATAATTTTGGCCCTAAACAGACCAAATTTAACCCTCGAGCTCAGGCTTGTGTGTTTGTTGGGTATCCCCTGAACCAACGCGGTTATAAATGTTTTCACCTGC
CGTCCAAGAAATACTTTGTTACTATGGATGTTACTTTCTGTGAGGACCGACCATATTTTTCCGTTAGCCATCTTAAGGGGGAGAGTATGAGGGAAGAGTCTAATAGCACC
TTTGAATTTATCGAACATACTCCTAGTACTGTGTCTGACATTGATACTCACCCTATAATCCTACCCACAAACCAAGTCCCTTGTAAAACATATTACAAGAGAAATCTTAG
AAAGGAAGTCAGGTCCCCTACTAGTCAGCCGCCGGCTTCAGTCCAAGACTCCAAACCTCCTCGAGATCAAGGTATGGAAAATCCTACTAAACCTTGTACTAATAATACAA
TGAATGAGAATGACAATTCTGATGTTATTATTCTTGAAAATGTGGAACAAAAGAACAATGGTGATGAGACTGAGGTCAGAACAGAAACTAGTAACAATGAAGCTGAACAG
GGTCATACAGGGAAACTTGACAAGTATGATACTTCTTTTGATCTTCCTATTGCATTAGGAAAAGGTACTAGGTCTTGTACAAAGCATTTCATATCTAATTATGTGTCATA
CGAGAATCTCTCACTACAGTTCAGAGATTTTACTGCCAGCCTTAACTCTACCACAATACCGAAAAATATTCATATTGCTTTAGAGAGTCCTGAATGGAAGAATGTTGTCA
TGGAAGAGATGAAAGCTCTGGAAAAGAATAACACTTGGGAGATTTGTGCTCTATCTAAGGGACACAAGTATGTAGGATGCAAATGGGTGTTCACTCTCAAATACAAAGCA
GATGGAACACTTGACAGACACAAGACAAGATTAGTTGCAAAAAGATTTACTCAGACCTATGGTGTTGATTATTCATAA
Protein sequenceShow/hide protein sequence
MSSRILYFQTPLECLKESYPSTRLILEVPLRVFGCIAYVHNFGPKQTKFNPRAQACVFVGYPLNQRGYKCFHLPSKKYFVTMDVTFCEDRPYFSVSHLKGESMREESNST
FEFIEHTPSTVSDIDTHPIILPTNQVPCKTYYKRNLRKEVRSPTSQPPASVQDSKPPRDQGMENPTKPCTNNTMNENDNSDVIILENVEQKNNGDETEVRTETSNNEAEQ
GHTGKLDKYDTSFDLPIALGKGTRSCTKHFISNYVSYENLSLQFRDFTASLNSTTIPKNIHIALESPEWKNVVMEEMKALEKNNTWEICALSKGHKYVGCKWVFTLKYKA
DGTLDRHKTRLVAKRFTQTYGVDYS