; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0062251 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0062251
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr03:2380331..2381149
RNA-Seq ExpressionCmc03g0062251
SyntenyCmc03g0062251
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033024.1 gag/pol protein [Cucumis melo var. makuwa]8.3e-13287.87Show/hide
Query:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR
        MSQTSY DKMLSRYKM NSKKGLL YRYGIHLSKEQCPKTPQEVEDMSNI YAS  ESLMYAMLCTR DICYSVEIVSRYQSNPGRDHW  VKNILKYLR
Subjt:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR

Query:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD
        RTKDYMLVYGS+DLILTGYT+SDFQTDKDARKSTSRSVFTLN GAV WRSIKQSCI +S +EA+YV ACEA KEAVWLKKFL DLEVVPNM L ITLYCD
Subjt:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD

Query:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRGL
        N+GAVANSREPRSHK+GKHIEQK+HLIREIVHRGDVT+TKIS EQNMAD FTKAL  KVFESHLHGLGL  L
Subjt:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRGL

KAA0052272.1 gag/pol protein [Cucumis melo var. makuwa]6.5e-12986.52Show/hide
Query:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR
        MSQTSY DKMLSRYKM NSKK LLPYRYGIHLSKEQCPKTPQEV+DMSNI YASA+ SLMYAMLCTRPDICYSV IVSRYQSNPG DHW  VKNILKYLR
Subjt:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR

Query:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD
        RTKDYMLVYGSKDLILT YTDSDFQ+DKD RKSTS SVFTLNG AVVW+ IKQSCIA+STMEAEYVA+CEA KEAVWLKKFL DLE+VPN+HL ITLYCD
Subjt:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD

Query:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGL
        N+GAVANS+EPRSHKR KHIE+KYHLIREI+HRGDVT+TKISSEQN+ D FTKAL AKVFESHLH L
Subjt:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGL

KAA0058854.1 gag/pol protein [Cucumis melo var. makuwa]2.8e-13288.24Show/hide
Query:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR
        MSQTSY DKMLSRYKM NSKK LLPYRYGIHLSKEQCPKTPQEVEDMSNI YA AI SLMYAMLC RPDICYSV IVS YQSNPGRDHW  VKNI+KYLR
Subjt:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR

Query:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD
        RTKDYM VYGSKDLILT YTDSDFQTDKDARKSTS SVF LNGGAVVWRSIKQSCIA+STME +YVAACEA KEAVWLKKFL DLEVVPNM L ITLYCD
Subjt:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD

Query:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRGL
        N+GAVANSREPRSHK GKHIE+KYHLIR+IVHRGDVTVTKISSE+NMAD F KAL AK+FESHLHGLGLRGL
Subjt:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRGL

KAA0067716.1 gag/pol protein [Cucumis melo var. makuwa]1.5e-12886.35Show/hide
Query:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR
        MSQTSY DKMLSR+KM NSKKGLLPYRYGIHLSKEQCPKT Q+V+DMSNI YASA+ SLMYAMLCTRP+ICYSV IVSRYQSNPGRDHW  VKNILKYLR
Subjt:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR

Query:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD
        RTK+YMLVYGSKDLILTGY D DFQTDKDARKSTS SVFTLNGGAVVWRSIKQSCI +STME EYVAA EA KEAVWLKKFL DLEVVPNMH+ ITLYCD
Subjt:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD

Query:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRG
        N+G VANSREPRSHKRGKHIE+KYHLIREIVHRGDVTVTK+ SEQNMA  FTKAL  KVF SHL GL LRG
Subjt:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRG

TYK23767.1 gag/pol protein [Cucumis melo var. makuwa]2.8e-13288.24Show/hide
Query:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR
        MSQTSY DKMLSRYKM NSKK LLPYRYGIHLSKEQCPKTPQEVEDMSNI YA AI SLMYAMLC RPDICYSV IVS YQSNPGRDHW  VKNI+KYLR
Subjt:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR

Query:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD
        RTKDYM VYGSKDLILT YTDSDFQTDKDARKSTS SVF LNGGAVVWRSIKQSCIA+STME +YVAACEA KEAVWLKKFL DLEVVPNM L ITLYCD
Subjt:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD

Query:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRGL
        N+GAVANSREPRSHK GKHIE+KYHLIR+IVHRGDVTVTKISSE+NMAD F KAL AK+FESHLHGLGLRGL
Subjt:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRGL

TrEMBL top hitse value%identityAlignment
A0A5A7SP86 Gag/pol protein4.0e-13287.87Show/hide
Query:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR
        MSQTSY DKMLSRYKM NSKKGLL YRYGIHLSKEQCPKTPQEVEDMSNI YAS  ESLMYAMLCTR DICYSVEIVSRYQSNPGRDHW  VKNILKYLR
Subjt:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR

Query:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD
        RTKDYMLVYGS+DLILTGYT+SDFQTDKDARKSTSRSVFTLN GAV WRSIKQSCI +S +EA+YV ACEA KEAVWLKKFL DLEVVPNM L ITLYCD
Subjt:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD

Query:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRGL
        N+GAVANSREPRSHK+GKHIEQK+HLIREIVHRGDVT+TKIS EQNMAD FTKAL  KVFESHLHGLGL  L
Subjt:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRGL

A0A5A7U945 Gag/pol protein3.2e-12986.52Show/hide
Query:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR
        MSQTSY DKMLSRYKM NSKK LLPYRYGIHLSKEQCPKTPQEV+DMSNI YASA+ SLMYAMLCTRPDICYSV IVSRYQSNPG DHW  VKNILKYLR
Subjt:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR

Query:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD
        RTKDYMLVYGSKDLILT YTDSDFQ+DKD RKSTS SVFTLNG AVVW+ IKQSCIA+STMEAEYVA+CEA KEAVWLKKFL DLE+VPN+HL ITLYCD
Subjt:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD

Query:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGL
        N+GAVANS+EPRSHKR KHIE+KYHLIREI+HRGDVT+TKISSEQN+ D FTKAL AKVFESHLH L
Subjt:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGL

A0A5A7UUR4 Gag/pol protein1.4e-13288.24Show/hide
Query:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR
        MSQTSY DKMLSRYKM NSKK LLPYRYGIHLSKEQCPKTPQEVEDMSNI YA AI SLMYAMLC RPDICYSV IVS YQSNPGRDHW  VKNI+KYLR
Subjt:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR

Query:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD
        RTKDYM VYGSKDLILT YTDSDFQTDKDARKSTS SVF LNGGAVVWRSIKQSCIA+STME +YVAACEA KEAVWLKKFL DLEVVPNM L ITLYCD
Subjt:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD

Query:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRGL
        N+GAVANSREPRSHK GKHIE+KYHLIR+IVHRGDVTVTKISSE+NMAD F KAL AK+FESHLHGLGLRGL
Subjt:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRGL

A0A5A7VMF5 Gag/pol protein7.1e-12986.35Show/hide
Query:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR
        MSQTSY DKMLSR+KM NSKKGLLPYRYGIHLSKEQCPKT Q+V+DMSNI YASA+ SLMYAMLCTRP+ICYSV IVSRYQSNPGRDHW  VKNILKYLR
Subjt:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR

Query:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD
        RTK+YMLVYGSKDLILTGY D DFQTDKDARKSTS SVFTLNGGAVVWRSIKQSCI +STME EYVAA EA KEAVWLKKFL DLEVVPNMH+ ITLYCD
Subjt:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD

Query:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRG
        N+G VANSREPRSHKRGKHIE+KYHLIREIVHRGDVTVTK+ SEQNMA  FTKAL  KVF SHL GL LRG
Subjt:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRG

A0A5D3DJL5 Gag/pol protein1.4e-13288.24Show/hide
Query:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR
        MSQTSY DKMLSRYKM NSKK LLPYRYGIHLSKEQCPKTPQEVEDMSNI YA AI SLMYAMLC RPDICYSV IVS YQSNPGRDHW  VKNI+KYLR
Subjt:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR

Query:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD
        RTKDYM VYGSKDLILT YTDSDFQTDKDARKSTS SVF LNGGAVVWRSIKQSCIA+STME +YVAACEA KEAVWLKKFL DLEVVPNM L ITLYCD
Subjt:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD

Query:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRGL
        N+GAVANSREPRSHK GKHIE+KYHLIR+IVHRGDVTVTKISSE+NMAD F KAL AK+FESHLHGLGLRGL
Subjt:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRGL

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.6e-3736.33Show/hide
Query:  MSQTSYTDKMLSRYKMHNSKKGLLP----YRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNIL
        +SQ++Y  K+LS++ M N      P      Y +  S E C           N    S I  LMY MLCTRPD+  +V I+SRY S    + W  +K +L
Subjt:  MSQTSYTDKMLSRYKMHNSKKGLLP----YRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNIL

Query:  KYLRRTKDYMLVYGSKDLI----LTGYTDSDFQTDKDARKSTSRSVFTL-NGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNM
        +YL+ T D  L++  K+L     + GY DSD+   +  RKST+  +F + +   + W + +Q+ +A S+ EAEY+A  EAV+EA+WLK  L  + +   +
Subjt:  KYLRRTKDYMLVYGSKDLI----LTGYTDSDFQTDKDARKSTSRSVFTL-NGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNM

Query:  HLSITLYCDNNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGL
           I +Y DN G ++ +  P  HKR KHI+ KYH  RE V    + +  I +E  +AD FTK L A  F      LGL
Subjt:  HLSITLYCDNNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGL

P0CV72 Secreted RxLR effector protein 1611.8e-2544.36Show/hide
Query:  MSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLRRTKDYMLVYGSKDLI-LTGYTDSDFQTDKDARKSTSRSVFTLNGGA
        M N+ Y SA+ ++MY M+ TRPD+  +V ++S++ S+P   HW  +K +L+YL+ T+ Y L +       L GY+D+D+  D ++R+STS  +F LNGG 
Subjt:  MSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLRRTKDYMLVYGSKDLI-LTGYTDSDFQTDKDARKSTSRSVFTLNGGA

Query:  VVWRSIKQSCIANSTMEAEYVAACEAVKEAVWL
        V WRS KQ  +A S+ E EY+A  EA +EAVWL
Subjt:  VVWRSIKQSCIANSTMEAEYVAACEAVKEAVWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.5e-5945.21Show/hide
Query:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR
        +SQ  Y +++L R+ M N+K    P    + LSK+ CP T +E  +M+ + Y+SA+ SLMYAM+CTRPDI ++V +VSR+  NPG++HW  VK IL+YLR
Subjt:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR

Query:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD
         T    L +G  D IL GYTD+D   D D RKS++  +FT +GGA+ W+S  Q C+A ST EAEY+AA E  KE +WLK+FL++L +    ++   +YCD
Subjt:  RTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCD

Query:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFE
        +  A+  S+    H R KHI+ +YH IRE+V    + V KIS+ +N AD  TK +    FE
Subjt:  NNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.1e-2530.74Show/hide
Query:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR
        +SQ  Y   +L+R  M  +K    P      LS     K     E      Y   + SL Y +  TRPDI Y+V  +S++   P  +H   +K IL+YL 
Subjt:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR

Query:  RTKDY-MLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYC
         T ++ + +     L L  Y+D+D+  DKD   ST+  +  L    + W S KQ  +  S+ EAEY +      E  W+   L +L +   +     +YC
Subjt:  RTKDY-MLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYC

Query:  DNNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGL
        DN GA      P  H R KHI   YH IR  V  G + V  +S+   +AD+ TK L    F++    +G+
Subjt:  DNNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.8e-2831.48Show/hide
Query:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR
        +SQ  YT  +L+R  M  +K    P      L+     K P   E      Y   + SL Y +  TRPD+ Y+V  +S+Y   P  DHW  +K +L+YL 
Subjt:  MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLR

Query:  RTKDY-MLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYC
         T D+ + +     L L  Y+D+D+  D D   ST+  +  L    + W S KQ  +  S+ EAEY +      E  W+   L +L +   +     +YC
Subjt:  RTKDY-MLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYC

Query:  DNNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGL
        DN GA      P  H R KHI   YH IR  V  G + V  +S+   +AD+ TK L    F++    +G+
Subjt:  DNNGAVANSREPRSHKRGKHIEQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.8e-2134.64Show/hide
Query:  YASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLRRTKDYMLVYGSK-DLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRS
        Y   I  LMY  + TR DI ++V  +S++   P   H   V  IL Y++ T    L Y S+ ++ L  ++D+ FQ+ KD R+ST+     L    + W+S
Subjt:  YASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLRRTKDYMLVYGSK-DLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRS

Query:  IKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCDNNGAVANSREPRSHKRGKHIEQKYHLIRE
         KQ  ++ S+ EAEY A   A  E +WL +F R+L++   +     L+CDN  A+  +     H+R KHIE   H +RE
Subjt:  IKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCDNNGAVANSREPRSHKRGKHIEQKYHLIRE

ATMG00810.1 DNA/RNA polymerases superfamily protein3.2e-0927.22Show/hide
Query:  MSQTSYTDKMLSRYKMHNSK--KGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKY
        +SQT Y +++L+   M + K     LP +    +S  + P       D S+ R  S + +L Y  L TRPDI Y+V IV +    P    +  +K +L+Y
Subjt:  MSQTSYTDKMLSRYKMHNSK--KGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKY

Query:  LRRTKDY-MLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVW
        ++ T  + + ++ +  L +  + DSD+      R+ST+     L    + W + +Q  ++ S+ E EY A      E  W
Subjt:  LRRTKDY-MLVYGSKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAAACATCTTATACAGATAAAATGTTGTCAAGATATAAGATGCATAATTCCAAAAAGGGTCTGCTGCCGTACAGATATGGAATTCATTTATCAAAAGAACAATG
TCCAAAGACACCTCAAGAAGTTGAGGATATGAGTAACATTCGCTATGCTTCTGCTATTGAGAGCCTGATGTATGCGATGTTATGTACTAGACCTGATATTTGTTATTCAG
TGGAAATAGTTAGTAGATATCAGTCCAATCCTGGACGTGATCATTGGATAACCGTTAAGAATATTCTAAAATATCTTAGAAGGACAAAAGACTACATGCTTGTGTATGGT
TCTAAGGATCTAATCCTTACTGGATACACTGACTCCGATTTTCAAACTGATAAAGATGCTAGAAAGTCTACATCAAGATCAGTTTTCACTTTGAACGGAGGAGCAGTAGT
ATGGAGAAGCATAAAACAATCCTGTATTGCCAACTCCACTATGGAAGCTGAATATGTAGCTGCCTGTGAAGCAGTGAAAGAAGCAGTATGGCTTAAAAAGTTCTTAAGAG
ATTTGGAAGTTGTTCCAAATATGCATCTGTCAATCACCTTGTACTGTGACAACAATGGTGCAGTTGCAAATTCACGAGAACCTAGAAGTCATAAACGAGGGAAGCACATT
GAACAAAAGTACCATCTTATCAGGGAAATCGTACATCGAGGAGACGTTACAGTAACAAAAATCTCCTCCGAGCAAAACATGGCTGATTCGTTTACAAAAGCTCTCATGGC
TAAAGTGTTTGAGAGCCACCTACATGGTTTAGGTCTACGCGGTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAAACATCTTATACAGATAAAATGTTGTCAAGATATAAGATGCATAATTCCAAAAAGGGTCTGCTGCCGTACAGATATGGAATTCATTTATCAAAAGAACAATG
TCCAAAGACACCTCAAGAAGTTGAGGATATGAGTAACATTCGCTATGCTTCTGCTATTGAGAGCCTGATGTATGCGATGTTATGTACTAGACCTGATATTTGTTATTCAG
TGGAAATAGTTAGTAGATATCAGTCCAATCCTGGACGTGATCATTGGATAACCGTTAAGAATATTCTAAAATATCTTAGAAGGACAAAAGACTACATGCTTGTGTATGGT
TCTAAGGATCTAATCCTTACTGGATACACTGACTCCGATTTTCAAACTGATAAAGATGCTAGAAAGTCTACATCAAGATCAGTTTTCACTTTGAACGGAGGAGCAGTAGT
ATGGAGAAGCATAAAACAATCCTGTATTGCCAACTCCACTATGGAAGCTGAATATGTAGCTGCCTGTGAAGCAGTGAAAGAAGCAGTATGGCTTAAAAAGTTCTTAAGAG
ATTTGGAAGTTGTTCCAAATATGCATCTGTCAATCACCTTGTACTGTGACAACAATGGTGCAGTTGCAAATTCACGAGAACCTAGAAGTCATAAACGAGGGAAGCACATT
GAACAAAAGTACCATCTTATCAGGGAAATCGTACATCGAGGAGACGTTACAGTAACAAAAATCTCCTCCGAGCAAAACATGGCTGATTCGTTTACAAAAGCTCTCATGGC
TAAAGTGTTTGAGAGCCACCTACATGGTTTAGGTCTACGCGGTTTGTAA
Protein sequenceShow/hide protein sequence
MSQTSYTDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIRYASAIESLMYAMLCTRPDICYSVEIVSRYQSNPGRDHWITVKNILKYLRRTKDYMLVYG
SKDLILTGYTDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIANSTMEAEYVAACEAVKEAVWLKKFLRDLEVVPNMHLSITLYCDNNGAVANSREPRSHKRGKHI
EQKYHLIREIVHRGDVTVTKISSEQNMADSFTKALMAKVFESHLHGLGLRGL