CuGenDBv2

Gene ID	Cmc03g0063391
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Photosystem I iron-sulfur center
Genome location	CMiso1.1chr03:3886306..3886560
RNA-Seq Expression	Cmc03g0063391
Synteny	Cmc03g0063391
Gene Ontology terms	GO:0009773 - photosynthetic electron transport in photosystem I (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0009055 - electron transfer activity (molecular function) GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0048038 - quinone binding (molecular function) GO:0051287 - NAD binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR017491 - Photosystem I protein PsaC IPR017896 - 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

Homology

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GenBank top hits

e value

%identity

Alignment

GGS41836.1 photosystem I iron-sulfur center [Streptomyces nojiriensis]

7.4e-39

89.29

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Query:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY
        +DPMSHSVKIYDTCIGCTQCVRAC TDVLEMIPW GCKAKQI S PRT+DCVGCKRCES CPT FLSVR+YLWHETTRSMGLAY
Subjt:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

QGW14994.1 photosystem I subunit VII [Hippophae tibetana]

7.4e-39

89.29

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Query:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY
        +DPMSHSVKIYDTCIGCTQCVRAC TDVLEMIPW GCKAKQI S PRT+DCVGCKRCES CPT FLSVR+YLWHETTRSMGLAY
Subjt:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

WP_219023663.1 photosystem I iron-sulfur center protein PsaC [Escherichia coli]

7.4e-39

89.29

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Query:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY
        +DPMSHSVKIYDTCIGCTQCVRAC TDVLEMIPW GCKAKQI S PRT+DCVGCKRCES CPT FLSVR+YLWHETTRSMGLAY
Subjt:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

YP_009443658.1 photosystem I subunit VII [Aconitum angustius]

7.4e-39

89.29

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Query:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY
        +DPMSHSVKIYDTCIGCTQCVRAC TDVLEMIPW GCKAKQI S PRT+DCVGCKRCES CPT FLSVR+YLWHETTRSMGLAY
Subjt:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

YP_009641612.1 photosystem I subunit VII [Rumex acetosa]

2.5e-39

90.48

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Query:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY
        MDPMSHSVKIYDTCIGCTQCVRAC TDVLEMIPW GCKAKQI S PRT+DCVGCKRCES CPT FLSVR+YLWHETTRSMGLAY
Subjt:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

TrEMBL top hits

e value

%identity

Alignment

A0A2D3C287 Photosystem I iron-sulfur center

3.6e-39

89.29

Show/hide

Query:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY
        +DPMSHSVKIYDTCIGCTQCVRAC TDVLEMIPW GCKAKQI S PRT+DCVGCKRCES CPT FLSVR+YLWHETTRSMGLAY
Subjt:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

A0A2H4V2U9 Photosystem I iron-sulfur center

3.6e-39

89.29

Show/hide

Query:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY
        +DPMSHSVKIYDTCIGCTQCVRAC TDVLEMIPW GCKAKQI S PRT+DCVGCKRCES CPT FLSVR+YLWHETTRSMGLAY
Subjt:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

A0A4D6DHA3 Photosystem I iron-sulfur center

1.2e-39

90.48

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Query:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY
        MDPMSHSVKIYDTCIGCTQCVRAC TDVLEMIPW GCKAKQI S PRT+DCVGCKRCES CPT FLSVR+YLWHETTRSMGLAY
Subjt:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

A0A5P9S0R4 Photosystem I iron-sulfur center

3.6e-39

89.29

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Query:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY
        +DPMSHSVKIYDTCIGCTQCVRAC TDVLEMIPW GCKAKQI S PRT+DCVGCKRCES CPT FLSVR+YLWHETTRSMGLAY
Subjt:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

A0A7D5XZP7 Photosystem I iron-sulfur center

1.2e-39

90.48

Show/hide

Query:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY
        MDPMSHSVKIYDTCIGCTQCVRAC TDVLEMIPW GCKAKQI S PRT+DCVGCKRCES CPT FLSVR+YLWHETTRSMGLAY
Subjt:  MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

SwissProt top hits

e value

%identity

Alignment

A4GGE7 Photosystem I iron-sulfur center

8.2e-41

91.36

Show/hide

Query:  MSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRAC TDVLEMIPWGGCKAKQI S PRT+DCVGCKRCES CPT FLSVR+YLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

A4QJG7 Photosystem I iron-sulfur center

5.3e-40

90.12

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Query:  MSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRAC TDVLEMIPW GCKAKQI S PRT+DCVGCKRCES CPT FLSVR+YLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

A4QJQ1 Photosystem I iron-sulfur center

5.3e-40

90.12

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Query:  MSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRAC TDVLEMIPW GCKAKQI S PRT+DCVGCKRCES CPT FLSVR+YLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

P10793 Photosystem I iron-sulfur center

8.2e-41

91.36

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Query:  MSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRAC TDVLEMIPWGGCKAKQI S PRT+DCVGCKRCES CPT FLSVR+YLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

P42046 Photosystem I iron-sulfur center

8.2e-41

91.36

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Query:  MSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRAC TDVLEMIPWGGCKAKQI S PRT+DCVGCKRCES CPT FLSVR+YLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

Arabidopsis top hits

e value

%identity

Alignment

ATCG01060.1 iron-sulfur cluster binding;electron carriers;4 iron, 4 sulfur cluster binding

3.8e-41

90.12

Show/hide

Query:  MSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCVRAC TDVLEMIPW GCKAKQI S PRT+DCVGCKRCES CPT FLSVR+YLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

Sequences

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CDS sequence

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ATGGATCCAATGTCACATTCAGTAAAGATTTATGATACATGTATAGGATGTACTCAATGTGTCCGAGCTTGCCTCACAGATGTATTAGAAATGATACCTTGGGGCGGATG
TAAAGCTAAACAAATAGTTTCGACTCCACGAACGAAAGATTGTGTTGGTTGTAAGAGATGTGAATCTGACTGTCCGACAACTTTTTTGAGTGTTCGCATTTATTTATGGC
ATGAAACAACTCGAAGCATGGGTCTAGCTTATTGA

mRNA sequence

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Protein sequence

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MDPMSHSVKIYDTCIGCTQCVRACLTDVLEMIPWGGCKAKQIVSTPRTKDCVGCKRCESDCPTTFLSVRIYLWHETTRSMGLAY

Cmc03g0063391 (gene) of Melon (Charmono) v1.1 genome