| GenBank top hits | e value | %identity | Alignment |
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| KAA0025998.1 pol protein [Cucumis melo var. makuwa] | 4.0e-99 | 89.95 | Show/hide |
Query: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
M+DFDVILG+DWLSANHA+I+CFGKEVVFNPP G+SFKFRGAG+VCIPKVISAMKASKLLSQGTWGILASVVD +E EVSLSSEPV+REY DVFPD+LPG
Subjt: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
Query: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
LPPPRE+DFAIELE GT PISRAPYRM PAELK+LKVQLQELLDKGFIRPSVSPWGA LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
Subjt: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
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| KAA0037369.1 pol protein [Cucumis melo var. makuwa] | 6.7e-99 | 89.95 | Show/hide |
Query: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
M+DFDVILG+DWLSANHA+I+CFGKEVVFNPP G+SFKFRG GIVCIPKVISAMKASKLLSQGTWGILASVVD +E EVSLSSEPV+REY DVFPD+LPG
Subjt: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
Query: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
LPPPRE+DFAIELE GT PISRAPYRM PAELK+LKVQLQELLDKGFIRPSVSPWGA LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
Subjt: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
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| KAA0058812.1 pol protein [Cucumis melo var. makuwa] | 3.0e-99 | 89.95 | Show/hide |
Query: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
M+DFDVILG+DWLSANHA+I+CFGKEVVFNPP G+SFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVD +E EVSLSSEPV+REY DVFPD+LPG
Subjt: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
Query: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
LPPPRE+DFAIELE GT PISRAPYRM PAELK+LKVQLQELLDKGFIRPSVSPWGA LFVKKKDGSMRLCIDYRELNKVT+KNRYPLPRIDDLFDQL
Subjt: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
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| KAA0059723.1 pol protein [Cucumis melo var. makuwa] | 5.2e-99 | 89.95 | Show/hide |
Query: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
M+DFDVILG+DWLSANHA+I+CFGKEVVFNPP G+SFKFRGAG+VCIPKVISAMKASKLLSQGTWGILASVVD +E EVSLSSEPV+REY DVFPD+LPG
Subjt: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
Query: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
LPPPRE+DFAIELE GT PISRAPYRM PAELK+LKVQLQELLDKGFIRPSVSPWGA LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
Subjt: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
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| TYK01306.1 pol protein [Cucumis melo var. makuwa] | 5.2e-99 | 89.95 | Show/hide |
Query: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
M+DFDVILG+DWLSANHA+I+CFGKEVVFNPP G+SFKFRGAG+VCIPKVISAMKASKLLSQGTWGILASVVD +E EVSLSSEPV+REY DVFPD+LPG
Subjt: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
Query: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
LPPPRE+DFAIELE GT PISRAPYRM PAELK+LKVQLQELLDKGFIRPSVSPWGA LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
Subjt: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7SIJ5 Reverse transcriptase | 1.9e-99 | 89.95 | Show/hide |
Query: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
M+DFDVILG+DWLSANHA+I+CFGKEVVFNPP G+SFKFRGAG+VCIPKVISAMKASKLLSQGTWGILASVVD +E EVSLSSEPV+REY DVFPD+LPG
Subjt: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
Query: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
LPPPRE+DFAIELE GT PISRAPYRM PAELK+LKVQLQELLDKGFIRPSVSPWGA LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
Subjt: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
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| A0A5A7T7M0 Reverse transcriptase | 3.3e-99 | 89.95 | Show/hide |
Query: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
M+DFDVILG+DWLSANHA+I+CFGKEVVFNPP G+SFKFRG GIVCIPKVISAMKASKLLSQGTWGILASVVD +E EVSLSSEPV+REY DVFPD+LPG
Subjt: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
Query: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
LPPPRE+DFAIELE GT PISRAPYRM PAELK+LKVQLQELLDKGFIRPSVSPWGA LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
Subjt: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
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| A0A5A7USG7 Reverse transcriptase | 1.5e-99 | 89.95 | Show/hide |
Query: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
M+DFDVILG+DWLSANHA+I+CFGKEVVFNPP G+SFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVD +E EVSLSSEPV+REY DVFPD+LPG
Subjt: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
Query: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
LPPPRE+DFAIELE GT PISRAPYRM PAELK+LKVQLQELLDKGFIRPSVSPWGA LFVKKKDGSMRLCIDYRELNKVT+KNRYPLPRIDDLFDQL
Subjt: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
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| A0A5A7UUX8 Reverse transcriptase | 2.5e-99 | 89.95 | Show/hide |
Query: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
M+DFDVILG+DWLSANHA+I+CFGKEVVFNPP G+SFKFRGAG+VCIPKVISAMKASKLLSQGTWGILASVVD +E EVSLSSEPV+REY DVFPD+LPG
Subjt: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
Query: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
LPPPRE+DFAIELE GT PISRAPYRM PAELK+LKVQLQELLDKGFIRPSVSPWGA LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
Subjt: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
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| A0A5D3BSV9 Reverse transcriptase | 2.5e-99 | 89.95 | Show/hide |
Query: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
M+DFDVILG+DWLSANHA+I+CFGKEVVFNPP G+SFKFRGAG+VCIPKVISAMKASKLLSQGTWGILASVVD +E EVSLSSEPV+REY DVFPD+LPG
Subjt: MRDFDVILGIDWLSANHASINCFGKEVVFNPPFGSSFKFRGAGIVCIPKVISAMKASKLLSQGTWGILASVVDTKESEVSLSSEPVIREYLDVFPDKLPG
Query: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
LPPPRE+DFAIELE GT PISRAPYRM PAELK+LKVQLQELLDKGFIRPSVSPWGA LFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
Subjt: LPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 3.0e-09 | 37.5 | Show/hide |
Query: YRMDPAELKKLKVQLQELLDKGFIRPSVSPWGAS-WLFVKKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
Y A ++++ Q+Q++L++G IR S SP+ + W+ KK+D S R+ IDYR+LN++TV +R+P+P +D++ +L
Subjt: YRMDPAELKKLKVQLQELLDKGFIRPSVSPWGAS-WLFVKKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
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| P10394 Retrovirus-related Pol polyprotein from transposon 412 | 3.2e-11 | 31.15 | Show/hide |
Query: EPVIREYLDVFPDKLPGLPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDG------SMRLCIDYRE
E + EY+D+F + + + L+ P+ YR +++++++ Q+Q+L+ + PSVS + + L V KK RL IDYR+
Subjt: EPVIREYLDVFPDKLPGLPPPREIDFAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDG------SMRLCIDYRE
Query: LNKVTVKNRYPLPRIDDLFDQL
+NK + +++PLPRIDD+ DQL
Subjt: LNKVTVKNRYPLPRIDDLFDQL
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 6.1e-10 | 36.78 | Show/hide |
Query: TPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGA-SWLFVKKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
+PI Y + +++ Q+QE+L++G IR S SP+ + +W+ KK D S R+ IDYR+LN++T+ +RYP+P +D++ +L
Subjt: TPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGA-SWLFVKKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQL
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 1.1e-14 | 36.75 | Show/hide |
Query: REYLDVFPDKLPGLPPPREID-----FAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVT
++Y ++ + LP P P +I+ IE++ G PY + +++ +Q+LLD FI PS SP + + V KKDG+ RLC+DYR LNK T
Subjt: REYLDVFPDKLPGLPPPREID-----FAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVT
Query: VKNRYPLPRIDDLFDQL
+ + +PLPRID+L ++
Subjt: VKNRYPLPRIDDLFDQL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.1e-14 | 36.75 | Show/hide |
Query: REYLDVFPDKLPGLPPPREID-----FAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVT
++Y ++ + LP P P +I+ IE++ G PY + +++ +Q+LLD FI PS SP + + V KKDG+ RLC+DYR LNK T
Subjt: REYLDVFPDKLPGLPPPREID-----FAIELESGTTPISRAPYRMDPAELKKLKVQLQELLDKGFIRPSVSPWGASWLFVKKKDGSMRLCIDYRELNKVT
Query: VKNRYPLPRIDDLFDQL
+ + +PLPRID+L ++
Subjt: VKNRYPLPRIDDLFDQL
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