| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032248.1 pol protein [Cucumis melo var. makuwa] | 2.2e-194 | 81.08 | Show/hide |
Query: SGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ--------------------
SGYHQLRIRD DIPKT FRSRYGHYEF+VMSFGL NAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ
Subjt: SGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ--------------------
Query: ---VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST------------------------ELKQKLVTAPVLIVPDGSGSFVIYSDASKKGLGCVLMQQGKV
VT L H+V SEGV V+P KIEAVT+WPRPST ELKQKLVTA VL VPDGSG+FVIYSDASKKGLGCVLMQQGKV
Subjt: ---VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST------------------------ELKQKLVTAPVLIVPDGSGSFVIYSDASKKGLGCVLMQQGKV
Query: VAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAA
VAYAS QLK HEQNYPTHDLEL AVVFALKIWRHYLYGEKIQI+T+HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAA
Subjt: VAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAA
Query: LITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDGLTFEGRLCVPEDSALTVELLTEAHSSP
LITKQ LLRDFERAEIAVSVGEVTSQL QLSVQPTLRQ+IIVAQLNDPYLV K R+VETGQGEDFSISSDDGL FEGRLCV EDSA+ ELLTEAHSSP
Subjt: LITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDGLTFEGRLCVPEDSALTVELLTEAHSSP
Query: FTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
FTMHP STKMYQ+LRSVYWWR MKREVADFVSR LVCQQVKAPR
Subjt: FTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
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| KAA0040547.1 pol protein [Cucumis melo var. makuwa] | 2.5e-193 | 76.43 | Show/hide |
Query: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ------------------
+RSGYHQLRIRD DIPKT FRSRYGHYEF+VMSFGL NAPAVFMDLMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ
Subjt: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ------------------
Query: -----VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST-------------------------------------------------ELKQKLVTAPVLIVP
VT L H+V SEGV V+P KIEAVT+WPRPST ELKQKLVTAPVL VP
Subjt: -----VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST-------------------------------------------------ELKQKLVTAPVLIVP
Query: DGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDY
DGSG+FVIYSDASKKGLGCVLMQQGKVVAYAS QLK +EQNYPTHDLEL AVVFALKIWRHYLYGEKIQI+T+HKSLKYFFTQKELNMRQRRWLELVKDY
Subjt: DGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDY
Query: DCEILYHPGKANVVADVLSRKVAHSAALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDG
DCEILYHPGKANVVAD LSRKVAHSA LITKQ LLRDFERAEIAVSVGEVTSQL QLSVQPTLRQ+II AQLNDPYLV+K R+VETGQGEDFSISSDDG
Subjt: DCEILYHPGKANVVADVLSRKVAHSAALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDG
Query: LTFEGRLCVPEDSALTVELLTEAHSSPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
L FEGRLCVPEDSA+ ELLTEAHSSPFTMHP STKMYQDLRSVYWWR MKREVADFVSR LVCQQVKAPR
Subjt: LTFEGRLCVPEDSALTVELLTEAHSSPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
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| KAA0040652.1 pol protein [Cucumis melo var. makuwa] | 3.2e-193 | 79.15 | Show/hide |
Query: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ------------------
+RSGYHQ RIRD DIPKT FRSRYGHYEF+VMSFGL NAPAVFMDLMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ
Subjt: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ------------------
Query: -----VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST------------------------ELKQKLVTAPVLIVPDGSGSFVIYSDASKKGLGCVLMQQG
VT L H+V SEGV V+P KIEAVT+WPRPST ELKQKLVTAPVL VPDGSG+FVIYSDASKKGLGCVLMQQG
Subjt: -----VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST------------------------ELKQKLVTAPVLIVPDGSGSFVIYSDASKKGLGCVLMQQG
Query: KVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHS
KVVAYAS QLK HEQNYPTHDLEL AVVFALKIWRHYLYGEKIQI+T+HKSLKYFFTQKELNMRQ+RWL LVKDY+CEILYHPGKANVVAD LSRKVAHS
Subjt: KVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHS
Query: AALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDGLTFEGRLCVPEDSALTVELLTEAHS
AALITKQ LLRDFERAEIAVSVGEVT+QL QLSVQPTLRQ+II AQ NDPYL +K R+VETGQGEDFSIS+DDGL FEGRLCVPED+A+ ELLTEAHS
Subjt: AALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDGLTFEGRLCVPEDSALTVELLTEAHS
Query: SPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
SPFTMHP STKMYQDLRSVYWWR MKREVADFVSR LVCQQVKAPR
Subjt: SPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
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| KAA0045309.1 pol protein [Cucumis melo var. makuwa] | 4.2e-193 | 76.22 | Show/hide |
Query: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ------------------
+RSGYHQLRIRD DIPKT FRSRYGHYEF+V+SFGL NAPAVFMDLMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ
Subjt: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ------------------
Query: -----VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST-------------------------------------------------ELKQKLVTAPVLIVP
VT L H+V SEGV V+P KIEAVT+WPRPST ELKQKLVTAPVL VP
Subjt: -----VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST-------------------------------------------------ELKQKLVTAPVLIVP
Query: DGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDY
DGSG+FVIYSDASKKGLGCVLMQQGKVVAYAS QLK HEQNYPTHDLEL AVVFALKIWRHYLYGEKIQI+T+HKSLKYFFTQKELNMRQRRWLELVKDY
Subjt: DGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDY
Query: DCEILYHPGKANVVADVLSRKVAHSAALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDG
DCEILYHPGKANVVAD LSRKVAHSAALITKQ LLRDFERAEIAVSVGEVT+QL QLSVQPTLRQ+II AQLNDPYL +K R+VETGQGEDFSISSDDG
Subjt: DCEILYHPGKANVVADVLSRKVAHSAALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDG
Query: LTFEGRLCVPEDSALTVELLTEAHSSPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
L FEGRLCVPEDSA+ ELLTEAHSSPFTMHP STKMYQDLRSVYWWR MKREVADFVSR LVCQQVKAPR
Subjt: LTFEGRLCVPEDSALTVELLTEAHSSPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
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| TYK08868.1 pol protein [Cucumis melo var. makuwa] | 5.5e-193 | 76.86 | Show/hide |
Query: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ------------------
+RSGYHQLRIRD+DIPKT FRSRYGHYEFIVMSFGL NAPAVFMDLMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ
Subjt: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ------------------
Query: -----VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST-------------------------------------------------ELKQKLVTAPVLIVP
VT L H+V SEGV V+ KIEAVT+WPRPST ELKQKLVTAPVL VP
Subjt: -----VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST-------------------------------------------------ELKQKLVTAPVLIVP
Query: DGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDY
DGSGSFVIYSD SKKGLGCVLMQQGKVVAYAS QLKSHEQNYPTHDLEL AVVF LKIWRHYLYGE+IQI+T+HKSLKYFFTQKELNMRQRRWLELVKDY
Subjt: DGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDY
Query: DCEILYHPGKANVVADVLSRKVAHSAALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDG
DCEILYHPGKANVVAD LSRKVAHSAALITKQ LLRDFERAEIAVSVGEVTSQL QL VQPTLRQRIIVAQLNDPYLV+K RLVET QGEDFSISS+DG
Subjt: DCEILYHPGKANVVADVLSRKVAHSAALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDG
Query: LTFEGRLCVPEDSALTVELLTEAHSSPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
L FEGRLCVPEDSA+ ELLTEAHSSPFTMHP STKMYQDLRSVYWWRNMKREVADFVSR LVCQQVKAPR
Subjt: LTFEGRLCVPEDSALTVELLTEAHSSPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SNR3 Reverse transcriptase | 1.1e-194 | 81.08 | Show/hide |
Query: SGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ--------------------
SGYHQLRIRD DIPKT FRSRYGHYEF+VMSFGL NAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ
Subjt: SGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ--------------------
Query: ---VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST------------------------ELKQKLVTAPVLIVPDGSGSFVIYSDASKKGLGCVLMQQGKV
VT L H+V SEGV V+P KIEAVT+WPRPST ELKQKLVTA VL VPDGSG+FVIYSDASKKGLGCVLMQQGKV
Subjt: ---VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST------------------------ELKQKLVTAPVLIVPDGSGSFVIYSDASKKGLGCVLMQQGKV
Query: VAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAA
VAYAS QLK HEQNYPTHDLEL AVVFALKIWRHYLYGEKIQI+T+HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAA
Subjt: VAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAA
Query: LITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDGLTFEGRLCVPEDSALTVELLTEAHSSP
LITKQ LLRDFERAEIAVSVGEVTSQL QLSVQPTLRQ+IIVAQLNDPYLV K R+VETGQGEDFSISSDDGL FEGRLCV EDSA+ ELLTEAHSSP
Subjt: LITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDGLTFEGRLCVPEDSALTVELLTEAHSSP
Query: FTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
FTMHP STKMYQ+LRSVYWWR MKREVADFVSR LVCQQVKAPR
Subjt: FTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
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| A0A5A7TB31 Pol protein | 1.6e-193 | 79.15 | Show/hide |
Query: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ------------------
+RSGYHQ RIRD DIPKT FRSRYGHYEF+VMSFGL NAPAVFMDLMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ
Subjt: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ------------------
Query: -----VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST------------------------ELKQKLVTAPVLIVPDGSGSFVIYSDASKKGLGCVLMQQG
VT L H+V SEGV V+P KIEAVT+WPRPST ELKQKLVTAPVL VPDGSG+FVIYSDASKKGLGCVLMQQG
Subjt: -----VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST------------------------ELKQKLVTAPVLIVPDGSGSFVIYSDASKKGLGCVLMQQG
Query: KVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHS
KVVAYAS QLK HEQNYPTHDLEL AVVFALKIWRHYLYGEKIQI+T+HKSLKYFFTQKELNMRQ+RWL LVKDY+CEILYHPGKANVVAD LSRKVAHS
Subjt: KVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHS
Query: AALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDGLTFEGRLCVPEDSALTVELLTEAHS
AALITKQ LLRDFERAEIAVSVGEVT+QL QLSVQPTLRQ+II AQ NDPYL +K R+VETGQGEDFSIS+DDGL FEGRLCVPED+A+ ELLTEAHS
Subjt: AALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDGLTFEGRLCVPEDSALTVELLTEAHS
Query: SPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
SPFTMHP STKMYQDLRSVYWWR MKREVADFVSR LVCQQVKAPR
Subjt: SPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
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| A0A5A7TG62 Reverse transcriptase | 1.2e-193 | 76.43 | Show/hide |
Query: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ------------------
+RSGYHQLRIRD DIPKT FRSRYGHYEF+VMSFGL NAPAVFMDLMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ
Subjt: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ------------------
Query: -----VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST-------------------------------------------------ELKQKLVTAPVLIVP
VT L H+V SEGV V+P KIEAVT+WPRPST ELKQKLVTAPVL VP
Subjt: -----VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST-------------------------------------------------ELKQKLVTAPVLIVP
Query: DGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDY
DGSG+FVIYSDASKKGLGCVLMQQGKVVAYAS QLK +EQNYPTHDLEL AVVFALKIWRHYLYGEKIQI+T+HKSLKYFFTQKELNMRQRRWLELVKDY
Subjt: DGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDY
Query: DCEILYHPGKANVVADVLSRKVAHSAALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDG
DCEILYHPGKANVVAD LSRKVAHSA LITKQ LLRDFERAEIAVSVGEVTSQL QLSVQPTLRQ+II AQLNDPYLV+K R+VETGQGEDFSISSDDG
Subjt: DCEILYHPGKANVVADVLSRKVAHSAALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDG
Query: LTFEGRLCVPEDSALTVELLTEAHSSPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
L FEGRLCVPEDSA+ ELLTEAHSSPFTMHP STKMYQDLRSVYWWR MKREVADFVSR LVCQQVKAPR
Subjt: LTFEGRLCVPEDSALTVELLTEAHSSPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
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| A0A5A7TVN9 Reverse transcriptase | 2.0e-193 | 76.22 | Show/hide |
Query: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ------------------
+RSGYHQLRIRD DIPKT FRSRYGHYEF+V+SFGL NAPAVFMDLMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ
Subjt: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ------------------
Query: -----VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST-------------------------------------------------ELKQKLVTAPVLIVP
VT L H+V SEGV V+P KIEAVT+WPRPST ELKQKLVTAPVL VP
Subjt: -----VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST-------------------------------------------------ELKQKLVTAPVLIVP
Query: DGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDY
DGSG+FVIYSDASKKGLGCVLMQQGKVVAYAS QLK HEQNYPTHDLEL AVVFALKIWRHYLYGEKIQI+T+HKSLKYFFTQKELNMRQRRWLELVKDY
Subjt: DGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDY
Query: DCEILYHPGKANVVADVLSRKVAHSAALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDG
DCEILYHPGKANVVAD LSRKVAHSAALITKQ LLRDFERAEIAVSVGEVT+QL QLSVQPTLRQ+II AQLNDPYL +K R+VETGQGEDFSISSDDG
Subjt: DCEILYHPGKANVVADVLSRKVAHSAALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDG
Query: LTFEGRLCVPEDSALTVELLTEAHSSPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
L FEGRLCVPEDSA+ ELLTEAHSSPFTMHP STKMYQDLRSVYWWR MKREVADFVSR LVCQQVKAPR
Subjt: LTFEGRLCVPEDSALTVELLTEAHSSPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
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| A0A5D3CCF0 Pol protein | 2.7e-193 | 76.86 | Show/hide |
Query: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ------------------
+RSGYHQLRIRD+DIPKT FRSRYGHYEFIVMSFGL NAPAVFMDLMN+VFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ
Subjt: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ------------------
Query: -----VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST-------------------------------------------------ELKQKLVTAPVLIVP
VT L H+V SEGV V+ KIEAVT+WPRPST ELKQKLVTAPVL VP
Subjt: -----VTLLSHMVFSEGVFVEPTKIEAVTHWPRPST-------------------------------------------------ELKQKLVTAPVLIVP
Query: DGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDY
DGSGSFVIYSD SKKGLGCVLMQQGKVVAYAS QLKSHEQNYPTHDLEL AVVF LKIWRHYLYGE+IQI+T+HKSLKYFFTQKELNMRQRRWLELVKDY
Subjt: DGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKDY
Query: DCEILYHPGKANVVADVLSRKVAHSAALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDG
DCEILYHPGKANVVAD LSRKVAHSAALITKQ LLRDFERAEIAVSVGEVTSQL QL VQPTLRQRIIVAQLNDPYLV+K RLVET QGEDFSISS+DG
Subjt: DCEILYHPGKANVVADVLSRKVAHSAALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGEDFSISSDDG
Query: LTFEGRLCVPEDSALTVELLTEAHSSPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
L FEGRLCVPEDSA+ ELLTEAHSSPFTMHP STKMYQDLRSVYWWRNMKREVADFVSR LVCQQVKAPR
Subjt: LTFEGRLCVPEDSALTVELLTEAHSSPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQQVKAPR
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 4.7e-38 | 29.91 | Show/hide |
Query: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHL--------------------
+ G+HQ+ + + KT F +++GHYE++ M FGL NAPA F MN + + L+ +V++DDI+++S + EH + L
Subjt: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHL--------------------
Query: ---HQVTLLSHMVFSEGVFVEPTKIEAVTHWPRPS--------------------------------------------------TELKQKLVTAPVLIV
+ T L H++ +G+ P KIEA+ +P P+ +LK + P+L V
Subjt: ---HQVTLLSHMVFSEGVFVEPTKIEAVTHWPRPS--------------------------------------------------TELKQKLVTAPVLIV
Query: PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKD
PD + F + +DAS LG VL Q G ++Y S L HE NY T + EL A+V+A K +RHYL G +I ++H+ L + + K+ N + RW + +
Subjt: PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKD
Query: YDCEILYHPGKANVVADVLSR
+D +I Y GK N VAD LSR
Subjt: YDCEILYHPGKANVVADVLSR
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| P0CT34 Transposon Tf2-1 polyprotein | 1.9e-34 | 24.05 | Show/hide |
Query: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEH-----------------------E
++S YH +R+R D K FR G +E++VM +G+ APA F +N + + +S V+ ++DDILI+SK+E+EH E
Subjt: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEH-----------------------E
Query: EHLHQVTLLSHMVFSEGVFVEPTKIEAVTHWPRPST-------------------------------------------------ELKQKLVTAPVLIVP
H QV + + + +G I+ V W +P +KQ LV+ PVL
Subjt: EHLHQVTLLSHMVFSEGVFVEPTKIEAVTHWPRPST-------------------------------------------------ELKQKLVTAPVLIVP
Query: DGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYG--EKIQIFTNHKSLKYFFTQKE--LNMRQR
D S ++ +DAS +G VL Q+ V Y S ++ + NY D E+ A++ +LK WRHYL E +I T+H++L T + N R
Subjt: DGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYG--EKIQIFTNHKSLKYFFTQKE--LNMRQR
Query: RWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGE
RW ++D++ EI Y PG AN +AD LSR ++ + + +D E I + + Q+S+ + +++ ND L++ + E
Subjt: RWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGE
Query: DFSISSDDGLTFEGRLCVPEDSALTVELLTEAHSSPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQ
+ + + + ++ +P D+ LT ++ + H +HP + + + W+ +++++ ++V CQ
Subjt: DFSISSDDGLTFEGRLCVPEDSALTVELLTEAHSSPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQ
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| P0CT41 Transposon Tf2-12 polyprotein | 1.9e-34 | 24.05 | Show/hide |
Query: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEH-----------------------E
++S YH +R+R D K FR G +E++VM +G+ APA F +N + + +S V+ ++DDILI+SK+E+EH E
Subjt: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEH-----------------------E
Query: EHLHQVTLLSHMVFSEGVFVEPTKIEAVTHWPRPST-------------------------------------------------ELKQKLVTAPVLIVP
H QV + + + +G I+ V W +P +KQ LV+ PVL
Subjt: EHLHQVTLLSHMVFSEGVFVEPTKIEAVTHWPRPST-------------------------------------------------ELKQKLVTAPVLIVP
Query: DGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYG--EKIQIFTNHKSLKYFFTQKE--LNMRQR
D S ++ +DAS +G VL Q+ V Y S ++ + NY D E+ A++ +LK WRHYL E +I T+H++L T + N R
Subjt: DGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYG--EKIQIFTNHKSLKYFFTQKE--LNMRQR
Query: RWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGE
RW ++D++ EI Y PG AN +AD LSR ++ + + +D E I + + Q+S+ + +++ ND L++ + E
Subjt: RWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQALLLRDFERAEIAVSVGEVTSQLTQLSVQPTLRQRIIVAQLNDPYLVDKCRLVETGQGE
Query: DFSISSDDGLTFEGRLCVPEDSALTVELLTEAHSSPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQ
+ + + + ++ +P D+ LT ++ + H +HP + + + W+ +++++ ++V CQ
Subjt: DFSISSDDGLTFEGRLCVPEDSALTVELLTEAHSSPFTMHPRSTKMYQDLRSVYWWRNMKREVADFVSRSLVCQ
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 5.8e-36 | 28.97 | Show/hide |
Query: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH-------------------
+ G+HQ+ + + I KT F ++ GHYE++ M FGL NAPA F MN + + L+ +V++DDI+I+S + EH +
Subjt: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH-------------------
Query: ----QVTLLSHMVFSEGVFVEPTKIEAVTHWPRPSTE--------------------------------------------------LKQKLVTAPVLIV
+ L H+V +G+ P K++A+ +P P+ + LK ++ P+L +
Subjt: ----QVTLLSHMVFSEGVFVEPTKIEAVTHWPRPSTE--------------------------------------------------LKQKLVTAPVLIV
Query: PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKD
PD FV+ +DAS LG VL Q G +++ S L HE NY + EL A+V+A K +RHYL G + I ++H+ L++ KE + RW + +
Subjt: PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIFTNHKSLKYFFTQKELNMRQRRWLELVKD
Query: YDCEILYHPGKANVVADVLSR
Y +I Y GK N VAD LSR
Subjt: YDCEILYHPGKANVVADVLSR
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 8.4e-35 | 27.08 | Show/hide |
Query: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH-------------------
+ SG+HQ+ ++++DIPKT F + G YEF+ + FGL NAPA+F +++ + ++ + V+IDDI+++S+ H ++L
Subjt: MRSGYHQLRIRDNDIPKTTFRSRYGHYEFIVMSFGLINAPAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH-------------------
Query: ----QVTLLSHMVFSEGVFVEPTKIEAVTHWPRPST------------------------------------------------------------ELKQ
QV L ++V ++G+ +P K+ A++ P P++ +LK
Subjt: ----QVTLLSHMVFSEGVFVEPTKIEAVTHWPRPST------------------------------------------------------------ELKQ
Query: KLVTAPVLIVPDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGE-KIQIFTNHKSLKYFFTQK
L ++ +L P + F + +DAS +G VL Q + + +AY S L E+NY T + E+ A++++L R YLYG I+++T+H+ L + +
Subjt: KLVTAPVLIVPDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASCQLKSHEQNYPTHDLELEAVVFALKIWRHYLYGE-KIQIFTNHKSLKYFFTQK
Query: ELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSR
N + +RW +++Y+CE++Y PGK+NVVAD LSR
Subjt: ELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSR
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