| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0052233.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] | 1.5e-90 | 81.22 | Show/hide |
Query: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
M+KLV E+L SG+IRPS SP+SSPVLLVKKKDGSWRFC+DYR+ N+V VPD FPIPVVEELFDEL GASLFTKIDLK GYHQIRM D D+EKTAFRTH+
Subjt: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
Query: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
HYEFLVMSFGLTNAPATFQSLMN+IF+PYLR+FVLVFFDDILIYS++ +DHLKH+E+V +VLRKHELFANRKKCSFG A+VEYLGH+IS G+EVDP
Subjt: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
|
|
| KAA0057179.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.3e-90 | 81.22 | Show/hide |
Query: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
M++LV E+LASG+IRPS SP+SSPVLLVKKKDGSWRFC+DYR+ N+V VPD FPIPVVEELFDEL GASLFTKIDLK GYHQIRM D D+EKTAFRTH+
Subjt: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
Query: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
HYEFLVM FGLTNAPATFQSLMN+IF+PYLRRFVLVFFDDILIYS++++D+LKHIE V +VLRKHELFANRKKCSFG A+VEYLGH+IS G+EVDP
Subjt: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
|
|
| KAA0062868.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 6.7e-91 | 81.73 | Show/hide |
Query: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
M++LV E+LASG+IRPS SP+SSPVLLVKKKDGSWRFC+DYR+ N+V VPD FPIPVVEELFDEL GASLFTKIDLK GYHQIRM D D+EKTAFRTH+
Subjt: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
Query: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
HYEFLVM FGLTNAPATFQSLMN+IF+PYLRRFVLVFFDDILIYS++++DHLKHIE V +VLRKHELFANRKKCSFG A+VEYLGH+IS G+EVDP
Subjt: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
|
|
| KAA0068193.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 6.7e-91 | 81.73 | Show/hide |
Query: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
M++LV E+LASG+IRPS SP+SSPVLLVKKKDGSWRFC+DYR+ N+V VPD FPIPVVEELFDEL GASLFTKIDLK GYHQIRM D D+EKTAFRTH+
Subjt: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
Query: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
HYEFLVM FGLTNAPATFQSLMN+IF+PYLRRFVLVFFDDILIYS++++DHLKHIE V +VLRKHELFANRKKCSFG A+VEYLGH+IS G+EVDP
Subjt: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
|
|
| TYJ96875.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 6.7e-91 | 81.73 | Show/hide |
Query: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
M++LV E+LASG+IRPS SP+SSPVLLVKKKDGSWRFC+DYR+ N+V VPD FPIPVVEELFDEL GASLFTKIDLK GYHQIRM D D+EKTAFRTH+
Subjt: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
Query: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
HYEFLVM FGLTNAPATFQSLMN+IF+PYLRRFVLVFFDDILIYS++++DHLKHIE V +VLRKHELFANRKKCSFG A+VEYLGH+IS G+EVDP
Subjt: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U8I6 Transposon Ty3-G Gag-Pol polyprotein | 7.2e-91 | 81.22 | Show/hide |
Query: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
M+KLV E+L SG+IRPS SP+SSPVLLVKKKDGSWRFC+DYR+ N+V VPD FPIPVVEELFDEL GASLFTKIDLK GYHQIRM D D+EKTAFRTH+
Subjt: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
Query: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
HYEFLVMSFGLTNAPATFQSLMN+IF+PYLR+FVLVFFDDILIYS++ +DHLKH+E+V +VLRKHELFANRKKCSFG A+VEYLGH+IS G+EVDP
Subjt: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
|
|
| A0A5A7V5H5 Ty3/gypsy retrotransposon protein | 3.2e-91 | 81.73 | Show/hide |
Query: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
M++LV E+LASG+IRPS SP+SSPVLLVKKKDGSWRFC+DYR+ N+V VPD FPIPVVEELFDEL GASLFTKIDLK GYHQIRM D D+EKTAFRTH+
Subjt: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
Query: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
HYEFLVM FGLTNAPATFQSLMN+IF+PYLRRFVLVFFDDILIYS++++DHLKHIE V +VLRKHELFANRKKCSFG A+VEYLGH+IS G+EVDP
Subjt: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
|
|
| A0A5A7VJA0 Ty3/gypsy retrotransposon protein | 3.2e-91 | 81.73 | Show/hide |
Query: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
M++LV E+LASG+IRPS SP+SSPVLLVKKKDGSWRFC+DYR+ N+V VPD FPIPVVEELFDEL GASLFTKIDLK GYHQIRM D D+EKTAFRTH+
Subjt: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
Query: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
HYEFLVM FGLTNAPATFQSLMN+IF+PYLRRFVLVFFDDILIYS++++DHLKHIE V +VLRKHELFANRKKCSFG A+VEYLGH+IS G+EVDP
Subjt: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
|
|
| A0A5D3BEL2 Ty3/gypsy retrotransposon protein | 3.2e-91 | 81.73 | Show/hide |
Query: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
M++LV E+LASG+IRPS SP+SSPVLLVKKKDGSWRFC+DYR+ N+V VPD FPIPVVEELFDEL GASLFTKIDLK GYHQIRM D D+EKTAFRTH+
Subjt: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
Query: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
HYEFLVM FGLTNAPATFQSLMN+IF+PYLRRFVLVFFDDILIYS++++DHLKHIE V +VLRKHELFANRKKCSFG A+VEYLGH+IS G+EVDP
Subjt: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
|
|
| A0A5D3D5G0 Ty3/gypsy retrotransposon protein | 1.6e-90 | 81.22 | Show/hide |
Query: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
M++LV E+LASG+IRPS SP+SSPVLLVKKKDGSWRFC+DYR+ N+V VPD FPIPVVEELFDEL GASLFTKIDLK GYHQIRM D D+EKTAFRTH+
Subjt: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
Query: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
HYEFLVM FGLTNAPATFQSLMN+IF+PYLRRFVLVFFDDILIYS++++D+LKHIE V +VLRKHELFANRKKCSFG A+VEYLGH+IS G+EVDP
Subjt: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 4.6e-42 | 43.94 | Show/hide |
Query: VGEILASGVIRPSVSPFSSPVLLV-KKKDGS----WRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHK
+ ++L G+IR S SP++SP+ +V KK+D S +R IDYR N++ V D PIP ++E+ +L + FT IDL G+HQI M + V KTAF T
Subjt: VGEILASGVIRPSVSPFSSPVLLV-KKKDGS----WRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHK
Query: DHYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
HYE+L M FGL NAPATFQ MN I +P L + LV+ DDI+++S S+D+HL+ + +V L K L KC F K +LGH+++ +GI+ +P
Subjt: DHYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
|
|
| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 3.2e-43 | 43.94 | Show/hide |
Query: VGEILASGVIRPSVSPFSSPVLLVKKKD-----GSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHK
V E+L G+IR S SP++SP +V KK +R IDYR N++ +PD +PIP ++E+ +L FT IDL G+HQI M ++ + KTAF T
Subjt: VGEILASGVIRPSVSPFSSPVLLVKKKD-----GSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHK
Query: DHYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
HYE+L M FGL NAPATFQ MN I +P L + LV+ DDI+I+S S+ +HL I++V L L KC F K +LGHI++ +GI+ +P
Subjt: DHYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEVDP
|
|
| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 7.8e-42 | 45.74 | Show/hide |
Query: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
+ K+V ++L + I PS SP SSPV+LV KKDG++R C+DYR+ N + D FP+P ++ L + A +FT +DL GYHQI M D KTAF T
Subjt: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
Query: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHII
YE+ VM FGL NAP+TF M F+ RFV V+ DDILI+S+S ++H KH++ VL L+ L +KKC F E+LG+ I
Subjt: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHII
|
|
| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 1.5e-40 | 39.11 | Show/hide |
Query: MKKLVGEILASGVIRPSVSPFSSPVLLVKKK-----DGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAF
+++ + E+L G+IRPS SP++SP+ +V KK + +R +D++ N V +PD +PIP + L A FT +DL G+HQI M + D+ KTAF
Subjt: MKKLVGEILASGVIRPSVSPFSSPVLLVKKK-----DGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAF
Query: RTHKDHYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEV
T YEFL + FGL NAPA FQ +++ I + ++ + V+ DDI+++S+ D H K++ +VL L K L N +K F +VE+LG+I++ +GI+
Subjt: RTHKDHYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHIISENGIEV
Query: DP
DP
Subjt: DP
|
|
| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 7.8e-42 | 45.74 | Show/hide |
Query: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
+ K+V ++L + I PS SP SSPV+LV KKDG++R C+DYR+ N + D FP+P ++ L + A +FT +DL GYHQI M D KTAF T
Subjt: MKKLVGEILASGVIRPSVSPFSSPVLLVKKKDGSWRFCIDYRSSNDVIVPDMFPIPVVEELFDELSGASLFTKIDLKVGYHQIRMADDDVEKTAFRTHKD
Query: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHII
YE+ VM FGL NAP+TF M F+ RFV V+ DDILI+S+S ++H KH++ VL L+ L +KKC F E+LG+ I
Subjt: HYEFLVMSFGLTNAPATFQSLMNTIFKPYLRRFVLVFFDDILIYSKSIDDHLKHIEVVLVVLRKHELFANRKKCSFGKARVEYLGHII
|
|
