; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0063891 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0063891
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationCMiso1.1chr03:4422344..4422997
RNA-Seq ExpressionCmc03g0063891
SyntenyCmc03g0063891
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032842.1 hypothetical protein E6C27_scaffold1987G00140 [Cucumis melo var. makuwa]1.1e-10589.86Show/hide
Query:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV
        MDVKT FLNGDL EEIYMEQPEGFIVHDQESKVCKLDKS+YD KQAPKQ +EKFDNLLMSKGFKVNESDKCIY K EGRLCIIICLYVDDMLIFGSNLHV
Subjt:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV

Query:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA
        INDVKSMLN NF M DL EAD+ILGIKITR ENGI LDQSHYIEKILKKYNYFDSKPA TPYD SVKLFKNTGDSVNQ+EYASII SLRYAADCTR DIA
Subjt:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA

Query:  YAIGLLCRFTNRPSLEH
        YA+GLLCRFT+RPSLEH
Subjt:  YAIGLLCRFTNRPSLEH

KAA0036533.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]8.4e-10386.18Show/hide
Query:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV
        MDVKT FLNGDLEEEIYMEQPEGFIV  QESKVCKLDKS+Y  KQAPK+W++KFDNLLMSKGFKVNES+KCIY KT+GRLCIIICLYVDDMLIFGSNLH+
Subjt:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV

Query:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA
        INDVKSML+ANF M DL EAD+IL IKITRTENGIFLDQSHYIEKILKKYNYFDSK A+TPYD SVKLFKNT DSVNQ+EYASII S+RYAADCT+LDIA
Subjt:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA

Query:  YAIGLLCRFTNRPSLEH
        YA+GLL RFT+RPSLEH
Subjt:  YAIGLLCRFTNRPSLEH

KAA0060459.1 hypothetical protein E6C27_scaffold22G002870 [Cucumis melo var. makuwa]6.2e-10689.4Show/hide
Query:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV
        MDVKTAFLNGDLEEEIYMEQPEGFIVH+QESKVCKLDKS+Y  KQAPKQW+EKFDNLLMSKGFKVNESDKCIY KTEGRLCIIICLYVDDMLIFGSNLHV
Subjt:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV

Query:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA
        INDVKSML+ NF M DL EAD+ILGIKITRTENGIFLDQSHYIEK LKKYNYFDSKP  TPYD SVKLFKNTGDSVNQTEYASII SLRYA D TR  IA
Subjt:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA

Query:  YAIGLLCRFTNRPSLEH
        YA+GLLCRFT+RPSLEH
Subjt:  YAIGLLCRFTNRPSLEH

TYK00058.1 hypothetical protein E5676_scaffold596G00040 [Cucumis melo var. makuwa]1.4e-10287.1Show/hide
Query:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV
        MDVKTAFLNGDLEEEIYM+QPEGFIVH QE+KV KLDKS YD KQAPKQW+EKF+NLLMSKGFKVNESD+CIY KTEGR+CIIICLYVDDMLIFGSNLH+
Subjt:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV

Query:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA
        INDVKSML+ANF M DL EAD+ILGIKI RTENGI LDQSHYIEKILKKYNYF+SKPA TPYD SVKLFKNTGDSVNQ+EYASII SLRYAADCTR DIA
Subjt:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA

Query:  YAIGLLCRFTNRPSLEH
        Y IGLLCRFT+R SLEH
Subjt:  YAIGLLCRFTNRPSLEH

TYK06419.1 hypothetical protein E5676_scaffold163G001210 [Cucumis melo var. makuwa]3.4e-10487.56Show/hide
Query:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV
        MDVKTAFLNGDLEEEIYMEQ EGFIVH QESKVCKLDKS+Y  KQAPKQW+EKFDNLL+SKGFKVNESDKCIY KTEGRLCIIICLYVDD+LIFGSNL+V
Subjt:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV

Query:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA
        INDVKSML+ NF M +LDEAD+ILGIKITRT+NGI LDQSHYIEKILKKYNYFDSKP  TPYD SVKLF+NTGDSVNQ+EYASII SLRYAADCTR DIA
Subjt:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA

Query:  YAIGLLCRFTNRPSLEH
        YA+GLLCRFT+RPSLEH
Subjt:  YAIGLLCRFTNRPSLEH

TrEMBL top hitse value%identityAlignment
A0A5A7SNZ1 Reverse transcriptase Ty1/copia-type domain-containing protein5.1e-10689.86Show/hide
Query:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV
        MDVKT FLNGDL EEIYMEQPEGFIVHDQESKVCKLDKS+YD KQAPKQ +EKFDNLLMSKGFKVNESDKCIY K EGRLCIIICLYVDDMLIFGSNLHV
Subjt:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV

Query:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA
        INDVKSMLN NF M DL EAD+ILGIKITR ENGI LDQSHYIEKILKKYNYFDSKPA TPYD SVKLFKNTGDSVNQ+EYASII SLRYAADCTR DIA
Subjt:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA

Query:  YAIGLLCRFTNRPSLEH
        YA+GLLCRFT+RPSLEH
Subjt:  YAIGLLCRFTNRPSLEH

A0A5A7T0X0 Retrotransposon protein, putative, Ty1-copia subclass4.1e-10386.18Show/hide
Query:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV
        MDVKT FLNGDLEEEIYMEQPEGFIV  QESKVCKLDKS+Y  KQAPK+W++KFDNLLMSKGFKVNES+KCIY KT+GRLCIIICLYVDDMLIFGSNLH+
Subjt:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV

Query:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA
        INDVKSML+ANF M DL EAD+IL IKITRTENGIFLDQSHYIEKILKKYNYFDSK A+TPYD SVKLFKNT DSVNQ+EYASII S+RYAADCT+LDIA
Subjt:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA

Query:  YAIGLLCRFTNRPSLEH
        YA+GLL RFT+RPSLEH
Subjt:  YAIGLLCRFTNRPSLEH

A0A5D3BLQ7 Reverse transcriptase Ty1/copia-type domain-containing protein6.9e-10387.1Show/hide
Query:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV
        MDVKTAFLNGDLEEEIYM+QPEGFIVH QE+KV KLDKS YD KQAPKQW+EKF+NLLMSKGFKVNESD+CIY KTEGR+CIIICLYVDDMLIFGSNLH+
Subjt:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV

Query:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA
        INDVKSML+ANF M DL EAD+ILGIKI RTENGI LDQSHYIEKILKKYNYF+SKPA TPYD SVKLFKNTGDSVNQ+EYASII SLRYAADCTR DIA
Subjt:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA

Query:  YAIGLLCRFTNRPSLEH
        Y IGLLCRFT+R SLEH
Subjt:  YAIGLLCRFTNRPSLEH

A0A5D3C7T6 Reverse transcriptase Ty1/copia-type domain-containing protein1.6e-10487.56Show/hide
Query:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV
        MDVKTAFLNGDLEEEIYMEQ EGFIVH QESKVCKLDKS+Y  KQAPKQW+EKFDNLL+SKGFKVNESDKCIY KTEGRLCIIICLYVDD+LIFGSNL+V
Subjt:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV

Query:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA
        INDVKSML+ NF M +LDEAD+ILGIKITRT+NGI LDQSHYIEKILKKYNYFDSKP  TPYD SVKLF+NTGDSVNQ+EYASII SLRYAADCTR DIA
Subjt:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA

Query:  YAIGLLCRFTNRPSLEH
        YA+GLLCRFT+RPSLEH
Subjt:  YAIGLLCRFTNRPSLEH

A0A5D3D4T4 Reverse transcriptase Ty1/copia-type domain-containing protein3.0e-10689.4Show/hide
Query:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV
        MDVKTAFLNGDLEEEIYMEQPEGFIVH+QESKVCKLDKS+Y  KQAPKQW+EKFDNLLMSKGFKVNESDKCIY KTEGRLCIIICLYVDDMLIFGSNLHV
Subjt:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV

Query:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA
        INDVKSML+ NF M DL EAD+ILGIKITRTENGIFLDQSHYIEK LKKYNYFDSKP  TPYD SVKLFKNTGDSVNQTEYASII SLRYA D TR  IA
Subjt:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIA

Query:  YAIGLLCRFTNRPSLEH
        YA+GLLCRFT+RPSLEH
Subjt:  YAIGLLCRFTNRPSLEH

SwissProt top hitse value%identityAlignment
P04146 Copia protein5.6e-3338.07Show/hide
Query:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRL--CIIICLYVDDMLIFGSNL
        MDVKTAFLNG L+EEIYM  P+G  +      VCKL+K+IY  KQA + W+E F+  L    F  +  D+CIY   +G +   I + LYVDD++I   ++
Subjt:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRL--CIIICLYVDDMLIFGSNL

Query:  HVINDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLD
          +N+ K  L   F M DL+E    +GI+I   E+ I+L QS Y++KIL K+N  +     TP    +       D    T   S+I  L Y   CTR D
Subjt:  HVINDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLD

Query:  IAYAIGLLCRFTNRPSLE
        +  A+ +L R++++ + E
Subjt:  IAYAIGLLCRFTNRPSLE

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-946.8e-4746.49Show/hide
Query:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSK--TEGRLCIIICLYVDDMLIFGSNL
        +DVKTAFL+GDLEEEIYMEQPEGF V  ++  VCKL+KS+Y  KQAP+QWY KFD+ + S+ +    SD C+Y K  +E    II+ LYVDDMLI G + 
Subjt:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSK--TEGRLCIIICLYVDDMLIFGSNL

Query:  HVINDVKSMLNANFVMNDLDEADIILGIKIT--RTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFK-------NTGDSVNQTEYASIIDSLR
         +I  +K  L+ +F M DL  A  ILG+KI   RT   ++L Q  YIE++L+++N  ++KP  TP    +KL K           ++ +  Y+S + SL 
Subjt:  HVINDVKSMLNANFVMNDLDEADIILGIKIT--RTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFK-------NTGDSVNQTEYASIIDSLR

Query:  YAADCTRLDIAYAIGLLCRFTNRPSLEH
        YA  CTR DIA+A+G++ RF   P  EH
Subjt:  YAADCTRLDIAYAIGLLCRFTNRPSLEH

P25600 Putative transposon Ty5-1 protein YCL074W3.0e-2635.16Show/hide
Query:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV
        MDV TAFLN  ++E IY++QP GF+       V +L   +Y  KQAP  W E  +N L   GF  +E +  +Y ++     I I +YVDD+L+   +  +
Subjt:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV

Query:  INDVKSMLNANFVMNDLDEADIILGIKITRTENG-IFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQ-TEYASIIDSLRYAADCTRLD
         + VK  L   + M DL + D  LG+ I ++ NG I L    YI K   +      K   TP   S  LF+ T   +   T Y SI+  L + A+  R D
Subjt:  INDVKSMLNANFVMNDLDEADIILGIKITRTENG-IFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQ-TEYASIIDSLRYAADCTRLD

Query:  IAYAIGLLCRFTNRPSLEH
        I+Y + LL RF   P   H
Subjt:  IAYAIGLLCRFTNRPSLEH

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.9e-3638.53Show/hide
Query:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV
        +DV  AFL G L +++YM QP GFI  D+ + VCKL K++Y  KQAP+ WY +  N L++ GF  + SD  ++    G+  + + +YVDD+LI G++  +
Subjt:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV

Query:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSV-NQTEYASIIDSLRYAADCTRLDI
        +++    L+  F + D +E    LGI+  R   G+ L Q  YI  +L + N   +KP  TP  PS KL   +G  + + TEY  I+ SL+Y A  TR DI
Subjt:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSV-NQTEYASIIDSLRYAADCTRLDI

Query:  AYAIGLLCRFTNRPSLEH
        +YA+  L +F + P+ EH
Subjt:  AYAIGLLCRFTNRPSLEH

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE24.3e-3335.78Show/hide
Query:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV
        +DV  AFL G L +E+YM QP GF+  D+   VC+L K+IY  KQAP+ WY +    L++ GF  + SD  ++    GR  I + +YVDD+LI G++  +
Subjt:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHV

Query:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSV-NQTEYASIIDSLRYAADCTRLDI
        +      L+  F + + ++    LGI+  R   G+ L Q  Y   +L + N   +KP  TP   S KL  ++G  + + TEY  I+ SL+Y A  TR D+
Subjt:  INDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSV-NQTEYASIIDSLRYAADCTRLDI

Query:  AYAIGLLCRFTNRPSLEH
        +YA+  L ++ + P+ +H
Subjt:  AYAIGLLCRFTNRPSLEH

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.8e-3437.39Show/hide
Query:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQES----KVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGS
        +D+  AFLNGDL+EEIYM+ P G+     +S     VC L KSIY  KQA +QW+ KF   L+  GF  + SD   + K    L + + +YVDD++I  +
Subjt:  MDVKTAFLNGDLEEEIYMEQPEGFIVHDQES----KVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGS

Query:  NLHVINDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNT-GDSVNQTEYASIIDSLRYAADCT
        N   ++++KS L + F + DL      LG++I R+  GI + Q  Y   +L +      KP+  P DPSV    ++ GD V+   Y  +I  L Y    T
Subjt:  NLHVINDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNT-GDSVNQTEYASIIDSLRYAADCT

Query:  RLDIAYAIGLLCRFTNRPSLEH
        RLDI++A+  L +F+  P L H
Subjt:  RLDIAYAIGLLCRFTNRPSLEH

ATMG00810.1 DNA/RNA polymerases superfamily protein1.8e-1534.09Show/hide
Query:  ICLYVDDMLIFGSNLHVINDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYAS
        + LYVDD+L+ GS+  ++N +   L++ F M DL      LGI+I    +G+FL Q+ Y E+IL      D KP  TP    +    +T    + +++ S
Subjt:  ICLYVDDMLIFGSNLHVINDVKSMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYAS

Query:  IIDSLRYAADCTRLDIAYAIGLLCRFTNRPSL
        I+ +L+Y    TR DI+YA+ ++C+  + P+L
Subjt:  IIDSLRYAADCTRLDIAYAIGLLCRFTNRPSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTTAAAACAGCTTTCCTAAATGGTGATTTAGAAGAAGAGATTTACATGGAACAACCTGAAGGTTTCATAGTTCACGACCAAGAATCCAAAGTTTGCAAA
CTAGATAAATCCATCTATGACCCAAAACAAGCTCCTAAGCAATGGTACGAAAAGTTTGACAACTTACTCATGTCAAAAGGATTCAAAGTAAATGAAAGTGACAAA
TGTATCTACTCTAAGACTGAAGGTAGACTATGTATTATCATATGCCTATATGTAGATGACATGTTAATCTTTGGATCAAACTTGCACGTCATAAATGATGTAAAA
TCTATGTTGAATGCAAATTTTGTCATGAATGACCTAGACGAAGCTGATATAATCTTAGGCATCAAAATTACAAGAACTGAAAATGGAATTTTCTTAGATCAATCT
CATTACATAGAAAAGATTCTAAAGAAGTACAATTACTTCGATAGTAAACCGGCTTATACACCTTATGACCCTAGTGTGAAATTATTCAAGAACACTGGTGATAGT
GTTAACCAAACTGAGTACGCTAGTATCATAGATAGTTTGAGGTATGCTGCTGATTGCACTAGACTAGACATAGCTTACGCCATAGGATTACTATGTAGGTTTACC
AACAGACCCAGTCTAGAACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGTTAAAACAGCTTTCCTAAATGGTGATTTAGAAGAAGAGATTTACATGGAACAACCTGAAGGTTTCATAGTTCACGACCAAGAATCCAAAGTTTGCAAA
CTAGATAAATCCATCTATGACCCAAAACAAGCTCCTAAGCAATGGTACGAAAAGTTTGACAACTTACTCATGTCAAAAGGATTCAAAGTAAATGAAAGTGACAAA
TGTATCTACTCTAAGACTGAAGGTAGACTATGTATTATCATATGCCTATATGTAGATGACATGTTAATCTTTGGATCAAACTTGCACGTCATAAATGATGTAAAA
TCTATGTTGAATGCAAATTTTGTCATGAATGACCTAGACGAAGCTGATATAATCTTAGGCATCAAAATTACAAGAACTGAAAATGGAATTTTCTTAGATCAATCT
CATTACATAGAAAAGATTCTAAAGAAGTACAATTACTTCGATAGTAAACCGGCTTATACACCTTATGACCCTAGTGTGAAATTATTCAAGAACACTGGTGATAGT
GTTAACCAAACTGAGTACGCTAGTATCATAGATAGTTTGAGGTATGCTGCTGATTGCACTAGACTAGACATAGCTTACGCCATAGGATTACTATGTAGGTTTACC
AACAGACCCAGTCTAGAACATTAG
Protein sequenceShow/hide protein sequence
MDVKTAFLNGDLEEEIYMEQPEGFIVHDQESKVCKLDKSIYDPKQAPKQWYEKFDNLLMSKGFKVNESDKCIYSKTEGRLCIIICLYVDDMLIFGSNLHVINDVK
SMLNANFVMNDLDEADIILGIKITRTENGIFLDQSHYIEKILKKYNYFDSKPAYTPYDPSVKLFKNTGDSVNQTEYASIIDSLRYAADCTRLDIAYAIGLLCRFT
NRPSLEH