| GenBank top hits | e value | %identity | Alignment |
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| ABI34306.1 Polyprotein, putative [Solanum demissum] | 1.4e-62 | 58.37 | Show/hide |
Query: MFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILTRNSKRY
MFKLN+E+NK ++S YML+S N WHARLCH+N R + MS L LIP + +FEKC CS+AKITK H V R T LEL+H+++CE GILTR RY
Subjt: MFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILTRNSKRY
Query: VVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILLE
+TFIDD S++T++YL KNKSDA+E F+ ++ E+ENQF ++IKR RSDRG EY+S FN F S GII++TT PYSP NG AERKNRTL EL A+L+E
Subjt: VVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILLE
Query: SGAAPSWWG
S A ++WG
Subjt: SGAAPSWWG
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| CAN66576.1 hypothetical protein VITISV_016964 [Vitis vinifera] | 1.5e-48 | 46.4 | Show/hide |
Query: MFKLN--------LEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGI
+FK+N + NKI SSAY+L S N+WH RL HVN + + L+ +PK ++ KC C ++K+TK+ V R T+PL+L HS++C+ +
Subjt: MFKLN--------LEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGI
Query: LTRNSKRYVVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTE
TR K+Y +TFIDDC+ Y ++YL K+K +A EMF+ + E+ENQ +K+IK RSDRG EY+S F EF GII++T APYSP+ NG AERKNRTL E
Subjt: LTRNSKRYVVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTE
Query: LVVAILLESGAAPSW-----WG
++ A+LL SG P + WG
Subjt: LVVAILLESGAAPSW-----WG
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| KAA0034938.1 putative Polyprotein [Cucumis melo var. makuwa] | 7.1e-107 | 92.34 | Show/hide |
Query: MFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILTRNSKRY
MFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITK SHKFV RVTKPLELIHS+LCEFDG LTRNSKRY
Subjt: MFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILTRNSKRY
Query: VVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILLE
VVTFIDDCS+YTFIYL KNKSDAYEMF+VFVTEIENQFNKRIKR RSDRGTEYDS+AFNEFYNSKGII++TT PYSP+MNGK ERKNRTLTEL VAILLE
Subjt: VVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILLE
Query: SGAAPSWWG
S AAPSWWG
Subjt: SGAAPSWWG
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| KAG5527251.1 hypothetical protein RHGRI_028223 [Rhododendron griersonianum] | 2.0e-48 | 48.82 | Show/hide |
Query: MFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHD--FEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILTRNSK
MFKL++ N ASS Y++ SF++WH+RL H+N R I NMSR LI + HD +KC C++AK+ K S V R ++ L+LIHS++CE +G+LTR K
Subjt: MFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHD--FEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILTRNSK
Query: RYVVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAIL
RY TF+DD S+YTF+YL + K + + F+ + E+ENQ NK+IK RSDRG EY F++F GII++ TAPYSP+ NG AERKNRTLTE+ ++
Subjt: RYVVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAIL
Query: LESGAAPSWWG
+ + A WG
Subjt: LESGAAPSWWG
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| RVW26252.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 5.1e-49 | 46.54 | Show/hide |
Query: MFKLN--------LEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGI
+FK+N + NKI SSAY+L S N+WH RL HVN + + L+ +PK ++ KC C ++K+TK+ V R T+PL+LIH+++C+ +
Subjt: MFKLN--------LEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGI
Query: LTRNSKRYVVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTE
TR K+Y +TFIDDC+ Y ++YL ++K +A EMF+ + E+ENQ +K+IK RSDRG EY+S+ F EF GII++TTAPYSP+ NG AE KNRTL E
Subjt: LTRNSKRYVVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTE
Query: LVVAILLESGAAPSWWG
++ A+LL SG + WG
Subjt: LVVAILLESGAAPSWWG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9F8T0 Integrase catalytic domain-containing protein | 1.0e-50 | 48.84 | Show/hide |
Query: MFKLN------LEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILT
+FK+N + NK SSAY+L S NVWH RL HVN R + + LNL+PK + KC C +AK+T+ S + R + PLELIHS++C+ + T
Subjt: MFKLN------LEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILT
Query: RNSKRYVVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELV
R ++Y VTFIDDCS Y ++YL ++K +A E F + E+ENQ NK+IK RSDRG EY+S F EF + GI+++TTAPYSP+ NG AERKNRTL E++
Subjt: RNSKRYVVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELV
Query: VAILLESGAAPSWWG
A+L+ SG + WG
Subjt: VAILLESGAAPSWWG
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| A0A5D3DCJ1 Putative Polyprotein | 3.4e-107 | 92.34 | Show/hide |
Query: MFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILTRNSKRY
MFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITK SHKFV RVTKPLELIHS+LCEFDG LTRNSKRY
Subjt: MFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILTRNSKRY
Query: VVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILLE
VVTFIDDCS+YTFIYL KNKSDAYEMF+VFVTEIENQFNKRIKR RSDRGTEYDS+AFNEFYNSKGII++TT PYSP+MNGK ERKNRTLTEL VAILLE
Subjt: VVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILLE
Query: SGAAPSWWG
S AAPSWWG
Subjt: SGAAPSWWG
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| A0A7N2L531 Uncharacterized protein | 1.3e-69 | 65.71 | Show/hide |
Query: MFKLNLEINKIA-SSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILTRNSKR
MFKLN+E NK + SS YML+S N WHARLCH+N R + MS L LIP+LS DFEKC CSQAKITK HK V+R T+ LELIHS+LCEF+GILTR R
Subjt: MFKLNLEINKIA-SSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILTRNSKR
Query: YVVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILL
Y++TFIDD S+YT IYL KNKSDA+E F+ F+ E+ENQF ++IKR RSDRG EY+S AFN F S GII++TTAPYSP NG AERKNRTL EL A+L+
Subjt: YVVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILL
Query: ESGAAPSWWG
ESGA +WG
Subjt: ESGAAPSWWG
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| A0A7N2R9F3 Uncharacterized protein | 2.2e-69 | 65.24 | Show/hide |
Query: MFKLNLEINKIA-SSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILTRNSKR
MFKLN+E NK + SS YML+S N WHARLCH+N R + MS L LIP+LS DFEKC CSQAKITK HK V+R T+ LELIHS+LCEF+GILTR R
Subjt: MFKLNLEINKIA-SSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILTRNSKR
Query: YVVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILL
Y++TFIDD S+YT IYL KNKSDA+E F+ F+ E+ENQF ++IKR RSDRG EY+S AFN F S GII++TTAPYSP NG ERKNRTL EL A+L+
Subjt: YVVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILL
Query: ESGAAPSWWG
ESGA +WG
Subjt: ESGAAPSWWG
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| Q0KIN7 Polyprotein, putative | 6.7e-63 | 58.37 | Show/hide |
Query: MFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILTRNSKRY
MFKLN+E+NK ++S YML+S N WHARLCH+N R + MS L LIP + +FEKC CS+AKITK H V R T LEL+H+++CE GILTR RY
Subjt: MFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILTRNSKRY
Query: VVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILLE
+TFIDD S++T++YL KNKSDA+E F+ ++ E+ENQF ++IKR RSDRG EY+S FN F S GII++TT PYSP NG AERKNRTL EL A+L+E
Subjt: VVTFIDDCSEYTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILLE
Query: SGAAPSWWG
S A ++WG
Subjt: SGAAPSWWG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.3e-23 | 33.17 | Show/hide |
Query: SFNVWHARLCHVN---------KRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILTRNSKRYVVTFIDDCSE
+F +WH R H++ K + S+ S LN + +LS E C QA++ K + +PL ++HS++C +T + K Y V F+D +
Subjt: SFNVWHARLCHVN---------KRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVIRVTKPLELIHSNLCEFDGILTRNSKRYVVTFIDDCSE
Query: YTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILLESGAAPSWWG
Y YL K KSD + MF+ FV + E FN ++ D G EY S +F KGI Y T P++P++NG +ER RT+TE ++ + S+WG
Subjt: YTFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILLESGAAPSWWG
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| P0C2J7 Transposon Ty4-H Gag-Pol polyprotein | 5.4e-09 | 28.7 | Show/hide |
Query: NSKRYVVTFIDDCSEY--TFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTEL
++KRY++ +D+ + Y T + KN + +E QF+++++ SDRGTE+ + E++ SKGI + T+ NG+AER RT+
Subjt: NSKRYVVTFIDDCSEY--TFIYLFKNKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTEL
Query: VVAILLESGAAPSWW
+L +S +W
Subjt: VVAILLESGAAPSWW
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.2e-25 | 32.46 | Show/hide |
Query: SFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVI-RVTKPLELIHSNLCEFDGILTRNSKRYVVTFIDDCSEYTFIYLFK
S ++WH R+ H++++ + +++ +LI + C C K ++S + R L+L++S++C I + +Y VTFIDD S ++Y+ K
Subjt: SFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKFVI-RVTKPLELIHSNLCEFDGILTRNSKRYVVTFIDDCSEYTFIYLFK
Query: NKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILLESGAAPSWWG
K +++F+ F +E + +++KR RSD G EY S F E+ +S GI ++ T P +P+ NG AER NRT+ E V ++L + S+WG
Subjt: NKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILLESGAAPSWWG
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.9e-22 | 35.26 | Show/hide |
Query: WHARLCH----VNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKIS-HKFVIRVTKPLELIHSNLCEFDGILTRNSKRYVVTFIDDCSEYTFIYLFK
WHARL H + +ISN S L P H F C+ C K K+ + I T+PLE I+S++ IL+ ++ RY V F+D + YT++Y K
Subjt: WHARLCH----VNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKIS-HKFVIRVTKPLELIHSNLCEFDGILTRNSKRYVVTFIDDCSEYTFIYLFK
Query: NKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILLESGAAPSWW
KS E F F +EN+F RI F SD G E+ +A E+++ GI + T+ P++P+ NG +ERK+R + E + +L + ++W
Subjt: NKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILLESGAAPSWW
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.1e-20 | 31.58 | Show/hide |
Query: WHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKF-----VIRVTKPLELIHSNLCEFDGILTRNSKRYVVTFIDDCSEYTFIYLFK
WH+RL H + +++++ + +P L+ K CS I K SHK I +KPLE I+S++ IL+ ++ RY V F+D + YT++Y K
Subjt: WHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKISHKF-----VIRVTKPLELIHSNLCEFDGILTRNSKRYVVTFIDDCSEYTFIYLFK
Query: NKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILLESGAAPSWW
KS + F +F + +EN+F RI SD G E+ + ++ + GI + T+ P++P+ NG +ERK+R + E+ + +L + ++W
Subjt: NKSDAYEMFEVFVTEIENQFNKRIKRFRSDRGTEYDSIAFNEFYNSKGIIYKTTAPYSPKMNGKAERKNRTLTELVVAILLESGAAPSWW
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