; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0063961 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0063961
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
Genome locationCMiso1.1chr03:4510116..4510511
RNA-Seq ExpressionCmc03g0063961
SyntenyCmc03g0063961
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0032456 - endocytic recycling (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005768 - endosome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035088.1 Beta-galactosidase [Cucumis melo var. makuwa]6.9e-6086.26Show/hide
Query:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD
        M GCRPADTPIEF+CKLRNSDDQVPVDKEQYQ LVGKLIYLSHTR DISF VS VSQFMQAPYE+HME V RIL YLK TPGKGLMF+KT++KTIE YTD
Subjt:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD

Query:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK
        S+W GSV+DRKSTSGYCTFVWGNLVTWRSKK
Subjt:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK

KAA0041566.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.3e-6089.92Show/hide
Query:  GCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTDSN
        GCR ADTPIEF+CKL NSDDQVPVDKEQYQ LVGKLIYLSHTR DISFVVSAVSQFMQAPYEEHMEAVKRI+ YLKTTPGKGLMF+KTDKKTIE YTDS+
Subjt:  GCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTDSN

Query:  WVGSVVDRKSTSGYCTFVWGNLVTWRSKK
        W   VVDRKSTSGYCTFVWGNLVTWRSKK
Subjt:  WVGSVVDRKSTSGYCTFVWGNLVTWRSKK

KAA0054937.1 Beta-galactosidase [Cucumis melo var. makuwa]6.5e-6696.18Show/hide
Query:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD
        MSGCRPADT IEFDCKL NSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLK TPGK LMFKKTDKKTIETYTD
Subjt:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD

Query:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK
        S+WVGSVVDRKSTSGYCTFVWGNLVTWRSKK
Subjt:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK

TYK19690.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.3e-6089.92Show/hide
Query:  GCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTDSN
        GCR ADTPIEF+CKL NSDDQVPVDKEQYQ LVGKLIYLSHTR DISFVVSAVSQFMQAPYEEHMEAVKRI+ YLKTTPGKGLMF+KTDKKTIE YTDS+
Subjt:  GCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTDSN

Query:  WVGSVVDRKSTSGYCTFVWGNLVTWRSKK
        W   VVDRKSTSGYCTFVWGNLVTWRSKK
Subjt:  WVGSVVDRKSTSGYCTFVWGNLVTWRSKK

TYK23097.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.3e-6089.31Show/hide
Query:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD
        M GC  ADTPIEF+CKL NSDDQVPVDKEQYQ LVGKLIYLSHT  DISF VSAVSQFMQAPYEEHMEAVKRIL YLKTTPGKGLMF+KTDKKTIE YTD
Subjt:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD

Query:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK
        S+W GSVVDRKSTSGYCTFVWGNLVTWRSKK
Subjt:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK

TrEMBL top hitse value%identityAlignment
A0A5A7SG80 Retrovirus-related Pol polyprotein from transposon TNT 1-943.4e-6088.55Show/hide
Query:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD
        M GC  ADTPIEF+CKL NSDDQVPVDKEQYQ LVGKLIYLSHT  DISF VSAVSQFMQAPYEEHMEAVKRIL YLKTTPGKGLMF+KTDKKTIE YTD
Subjt:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD

Query:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK
        S+W GS+VDRKSTSGYCTFVWGNLVTWRSKK
Subjt:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK

A0A5A7THM8 Putative mitochondrial protein2.6e-6089.92Show/hide
Query:  GCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTDSN
        GCR ADTPIEF+CKL NSDDQVPVDKEQYQ LVGKLIYLSHTR DISFVVSAVSQFMQAPYEEHMEAVKRI+ YLKTTPGKGLMF+KTDKKTIE YTDS+
Subjt:  GCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTDSN

Query:  WVGSVVDRKSTSGYCTFVWGNLVTWRSKK
        W   VVDRKSTSGYCTFVWGNLVTWRSKK
Subjt:  WVGSVVDRKSTSGYCTFVWGNLVTWRSKK

A0A5A7UJZ2 Beta-galactosidase3.1e-6696.18Show/hide
Query:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD
        MSGCRPADT IEFDCKL NSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLK TPGK LMFKKTDKKTIETYTD
Subjt:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD

Query:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK
        S+WVGSVVDRKSTSGYCTFVWGNLVTWRSKK
Subjt:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK

A0A5D3D898 Putative mitochondrial protein2.6e-6089.92Show/hide
Query:  GCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTDSN
        GCR ADTPIEF+CKL NSDDQVPVDKEQYQ LVGKLIYLSHTR DISFVVSAVSQFMQAPYEEHMEAVKRI+ YLKTTPGKGLMF+KTDKKTIE YTDS+
Subjt:  GCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTDSN

Query:  WVGSVVDRKSTSGYCTFVWGNLVTWRSKK
        W   VVDRKSTSGYCTFVWGNLVTWRSKK
Subjt:  WVGSVVDRKSTSGYCTFVWGNLVTWRSKK

A0A5D3DHC0 Retrovirus-related Pol polyprotein from transposon TNT 1-942.6e-6089.31Show/hide
Query:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD
        M GC  ADTPIEF+CKL NSDDQVPVDKEQYQ LVGKLIYLSHT  DISF VSAVSQFMQAPYEEHMEAVKRIL YLKTTPGKGLMF+KTDKKTIE YTD
Subjt:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD

Query:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK
        S+W GSVVDRKSTSGYCTFVWGNLVTWRSKK
Subjt:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1612.1e-1441.18Show/hide
Query:  YQCLVGKLIYLS-HTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTDSNWVGSVVDRKSTSGYCTFVWGNLVTWRS
        Y   VG ++YL   TR D++  V  +SQF   P   H +A+KR+L YL++T   GL F +     +  Y+D++W G V  R+STSGY   + G  V+WRS
Subjt:  YQCLVGKLIYLS-HTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTDSNWVGSVVDRKSTSGYCTFVWGNLVTWRS

Query:  KK
        KK
Subjt:  KK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.6e-1435.77Show/hide
Query:  MSGCRPADTPIEFDCKLRNS------DDQVPVDKEQYQCLVGKLIY-LSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKK
        M   +P  TP+    KL         +++  + K  Y   VG L+Y +  TR DI+  V  VS+F++ P +EH EAVK IL YL+ T G  L F  +D  
Subjt:  MSGCRPADTPIEFDCKLRNS------DDQVPVDKEQYQCLVGKLIY-LSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKK

Query:  TIETYTDSNWVGSVVDRKSTSGYCTFVWGNLVTWRSK
         ++ YTD++  G + +RKS++GY     G  ++W+SK
Subjt:  TIETYTDSNWVGSVVDRKSTSGYCTFVWGNLVTWRSK

P92519 Uncharacterized mitochondrial protein AtMg008101.1e-1835.88Show/hide
Query:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD
        M  C+P  TP+        S  + P D   ++ +VG L YL+ TR DIS+ V+ V Q M  P     + +KR+L Y+K T   GL   K  K  ++ + D
Subjt:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD

Query:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK
        S+W G    R+ST+G+CTF+  N+++W +K+
Subjt:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.7e-2139.69Show/hide
Query:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD
        M   +P  TP+    KL         D  +Y+ +VG L YL+ TR DIS+ V+ +SQFM  P EEH++A+KRIL YL  TP  G+  KK +  ++  Y+D
Subjt:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD

Query:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK
        ++W G   D  ST+GY  ++  + ++W SKK
Subjt:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE29.5e-2037.12Show/hide
Query:  MSGCRPADTPIEFDCKLR-NSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYT
        M   +P  TP+    KL  +S  ++P D  +Y+ +VG L YL+ TR D+S+ V+ +SQ+M  P ++H  A+KR+L YL  TP  G+  KK +  ++  Y+
Subjt:  MSGCRPADTPIEFDCKLR-NSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYT

Query:  DSNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK
        D++W G   D  ST+GY  ++  + ++W SKK
Subjt:  DSNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 84.7e-2237.21Show/hide
Query:  GCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTDSN
        GC+P+  P++             VD + Y+ L+G+L+YL  TR DISF V+ +SQF +AP   H +AV +IL Y+K T G+GL +    +  ++ ++D++
Subjt:  GCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTDSN

Query:  WVGSVVDRKSTSGYCTFVWGNLVTWRSKK
        +      R+ST+GYC F+  +L++W+SKK
Subjt:  WVGSVVDRKSTSGYCTFVWGNLVTWRSKK

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.7e-1136.59Show/hide
Query:  IYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTDSNWVGSVVDRKSTSGYCTFV
        +YL+ TR D++F V+ +SQF  A     M+AV ++L Y+K T G+GL +  T    ++ + DS+W      R+S +G+C+ V
Subjt:  IYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTDSNWVGSVVDRKSTSGYCTFV

ATMG00810.1 DNA/RNA polymerases superfamily protein7.5e-2035.88Show/hide
Query:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD
        M  C+P  TP+        S  + P D   ++ +VG L YL+ TR DIS+ V+ V Q M  P     + +KR+L Y+K T   GL   K  K  ++ + D
Subjt:  MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTD

Query:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK
        S+W G    R+ST+G+CTF+  N+++W +K+
Subjt:  SNWVGSVVDRKSTSGYCTFVWGNLVTWRSKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGATGTCGTCCCGCTGACACTCCTATTGAATTCGACTGTAAACTAAGAAACTCTGATGATCAAGTTCCAGTTGATAAGGAACAATATCAGTGCCTTGTGGGTAA
ATTGATTTACTTATCTCATACTCGTTCTGATATTTCCTTTGTTGTTAGTGCTGTCAGCCAGTTTATGCAAGCTCCCTATGAGGAACACATGGAAGCTGTCAAAAGAATTC
TGGGATACTTAAAAACGACACCTGGCAAAGGGTTGATGTTTAAAAAGACAGACAAAAAGACCATTGAGACATATACTGACTCGAATTGGGTAGGATCTGTTGTTGACAGA
AAGTCTACCTCCGGTTATTGTACCTTTGTTTGGGGTAATCTTGTAACTTGGAGGAGTAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGGATGTCGTCCCGCTGACACTCCTATTGAATTCGACTGTAAACTAAGAAACTCTGATGATCAAGTTCCAGTTGATAAGGAACAATATCAGTGCCTTGTGGGTAA
ATTGATTTACTTATCTCATACTCGTTCTGATATTTCCTTTGTTGTTAGTGCTGTCAGCCAGTTTATGCAAGCTCCCTATGAGGAACACATGGAAGCTGTCAAAAGAATTC
TGGGATACTTAAAAACGACACCTGGCAAAGGGTTGATGTTTAAAAAGACAGACAAAAAGACCATTGAGACATATACTGACTCGAATTGGGTAGGATCTGTTGTTGACAGA
AAGTCTACCTCCGGTTATTGTACCTTTGTTTGGGGTAATCTTGTAACTTGGAGGAGTAAGAAATAA
Protein sequenceShow/hide protein sequence
MSGCRPADTPIEFDCKLRNSDDQVPVDKEQYQCLVGKLIYLSHTRSDISFVVSAVSQFMQAPYEEHMEAVKRILGYLKTTPGKGLMFKKTDKKTIETYTDSNWVGSVVDR
KSTSGYCTFVWGNLVTWRSKK