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Cmc03g0064151 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0064151
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptiontranscription factor VIP1-like
Genome locationCMiso1.1chr03:4690839..4691403
RNA-Seq ExpressionCmc03g0064151
SyntenyCmc03g0064151
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646672.1 hypothetical protein Csa_005436 [Cucumis sativus]1.9e-3795.45Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG
        MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNM GGGLPPQFPPLQTS LQFGNSQNHQ PQLLH+SQPDARGGSPPSQLPG
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG

XP_008441523.1 PREDICTED: transcription factor VIP1-like [Cucumis melo]2.9e-41100Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG
        MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG

XP_031742052.1 LOW QUALITY PROTEIN: transcription factor VIP1-like [Cucumis sativus]9.5e-3794.32Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG
        MEQQAHLRDALNETL EEVQRLKIAAAQLPVANGNSFNM GGGLPPQFPPLQTS LQFGNSQNHQ PQLLH+SQPDARGGSPPSQLPG
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG

XP_031744081.1 transcription factor VIP1 [Cucumis sativus]1.9e-3795.45Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG
        MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNM GGGLPPQFPPLQTS LQFGNSQNHQ PQLLH+SQPDARGGSPPSQLPG
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG

XP_038886256.1 transcription factor VIP1-like [Benincasa hispida]6.2e-3693.18Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG
        MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFN+ GGGLPPQFPPLQTSLLQFGN QNHQ PQLLH+SQPDARGGS PSQLPG
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG

TrEMBL top hitse value%identityAlignment
A0A0A0KBC6 BZIP domain-containing protein9.3e-3895.45Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG
        MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNM GGGLPPQFPPLQTS LQFGNSQNHQ PQLLH+SQPDARGGSPPSQLPG
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG

A0A1S3B3P0 transcription factor VIP1-like1.4e-41100Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG
        MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG

A0A5A7UMX9 Transcription factor VIP1-like1.4e-41100Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG
        MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG

A0A6J1BXG7 transcription factor VIP16.9e-2577.78Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANG-NSFNMGGGGLPPQFP-PLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG
        MEQQA LRDALN+TLREEVQRLKIAAAQLP ANG NSFN  GGGLPPQFP  L  SLLQFG+S NH+H QLLH+ QPDA+G S  SQLPG
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANG-NSFNMGGGGLPPQFP-PLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPG

A0A6J1JRY6 transcription factor VIP1-like6.1e-2186.15Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQ
        MEQQA LRDALNETL+EEVQRLKIAAAQLPVANG+SFN+GGG LPPQF  LQ SL QFGNSQNHQ
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQ

SwissProt top hitse value%identityAlignment
O22873 bZIP transcription factor 188.5e-0439.02Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQN------HQHPQLLHVSQPD
        MEQQA LRDALNE L++EV+RLK A  +  V+  +++N+G   +  Q  P Q S  Q  + Q        Q     H+ QP+
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQN------HQHPQLLHVSQPD

Q69IL4 Transcription factor RF2a1.6e-0748.57Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLL
        MEQQ HL+DALN+TL+ EVQRLK+A  Q+  ANG    M  GG+P QF          GN Q  Q+ Q +
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLL

Q6S4P4 Transcription factor RF2b5.0e-0435.58Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQL---------------------PVANGNSFNMGGG-GLPPQFPPLQTSLLQFGNSQNH--QHPQ-LLHVSQP
        MEQQA LRDALN+ L++E++RLK+A  ++                     P+A  N+    GG  LPPQF P +       N  NH   HP  L  + Q 
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQL---------------------PVANGNSFNMGGG-GLPPQFPPLQTSLLQFGNSQNH--QHPQ-LLHVSQP

Query:  DARG
        D  G
Subjt:  DARG

Q9MA75 Transcription factor VIP14.6e-1050.77Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQ
        +EQQA LRDALNE LR+E+ RLK+ A ++P  NGNS+N        QF   Q+++ QFGN  N Q
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQ

Arabidopsis top hitse value%identityAlignment
AT1G06070.1 Basic-leucine zipper (bZIP) transcription factor family protein2.2e-0746.38Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQL
        MEQQ HL+DALN+ L+EEVQ LK+   Q P +NG S N G  G   QF P   S+     +Q  Q  Q+
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQL

AT1G06850.1 basic leucine-zipper 527.9e-0555Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMG
        MEQQA LR+ALNE LR+EV+R+K+   ++   N +SF+MG
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMG

AT1G43700.1 VIRE2-interacting protein 13.3e-1150.77Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQ
        +EQQA LRDALNE LR+E+ RLK+ A ++P  NGNS+N        QF   Q+++ QFGN  N Q
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQ

AT2G40620.1 Basic-leucine zipper (bZIP) transcription factor family protein6.0e-0539.02Show/hide
Query:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQN------HQHPQLLHVSQPD
        MEQQA LRDALNE L++EV+RLK A  +  V+  +++N+G   +  Q  P Q S  Q  + Q        Q     H+ QP+
Subjt:  MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQN------HQHPQLLHVSQPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAGCAAGCCCATCTGAGGGATGCTTTGAATGAGACATTGAGGGAGGAAGTACAGCGACTTAAGATAGCTGCTGCCCAACTGCCTGTTGCAAATGGCAACTCGTT
CAACATGGGAGGAGGAGGGCTACCTCCTCAATTCCCTCCTCTCCAAACATCATTGCTTCAATTTGGCAACTCTCAGAATCATCAACACCCACAGCTGCTTCACGTGTCTC
AACCTGATGCTCGAGGAGGGTCTCCACCGTCCCAGCTTCCAGGAACTTAA
mRNA sequenceShow/hide mRNA sequence
GAAGGTATATGTTTCAACTGATTGAGCTATGCTTAGTAATCTACTTTGGTGCAGAGAGATACCACTGGATTGACTACTGAGAACAGAGAACTCAAGCTAAGATTGCAAGC
CATGGAGCAGCAAGCCCATCTGAGGGATGCTTTGAATGAGACATTGAGGGAGGAAGTACAGCGACTTAAGATAGCTGCTGCCCAACTGCCTGTTGCAAATGGCAACTCGT
TCAACATGGGAGGAGGAGGGCTACCTCCTCAATTCCCTCCTCTCCAAACATCATTGCTTCAATTTGGCAACTCTCAGAATCATCAACACCCACAGCTGCTTCACGTGTCT
CAACCTGATGCTCGAGGAGGGTCTCCACCGTCCCAGCTTCCAGGAACTTAACCACATGCTTTAGTAACAGCTTTAGATAATCCATTAAGTACTGAGGATTGATATTTTTA
TTTGG
Protein sequenceShow/hide protein sequence
MEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGGLPPQFPPLQTSLLQFGNSQNHQHPQLLHVSQPDARGGSPPSQLPGT