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Cmc03g0064251 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0064251
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationCMiso1.1chr03:4853534..4854994
RNA-Seq ExpressionCmc03g0064251
SyntenyCmc03g0064251
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG57080.1 hypothetical protein EZV62_018393 [Acer yangbiense]2.9e-2054.95Show/hide
Query:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLP
        LF  KPN   LK +GC C+PYLR Y  HKFDFH+ KCI LG S  HKG+KCL  SGKI +SR+V FNE +FP   +FS  ++ + S   LP
Subjt:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLP

TXG58227.1 hypothetical protein EZV62_016056 [Acer yangbiense]2.9e-2054.95Show/hide
Query:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLP
        LF  KPN   LK +GC C+PYLR Y  HKFDFH+ KCI LG S  HKG+KCL  SGKI +SR+V FNE +FP   +FS  ++ + S   LP
Subjt:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLP

TXG66095.1 hypothetical protein EZV62_007370 [Acer yangbiense]5.8e-2156.04Show/hide
Query:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLP
        LF  KPN   LK +GC C+PYLR Y  HKFDFH+ KCI LG S  HKG+KCL  SGKI +SR+V FNE +FP   +FS  +N + S  +LP
Subjt:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLP

TXG66432.1 hypothetical protein EZV62_007707 [Acer yangbiense]1.7e-2056.82Show/hide
Query:  VNPHLKILFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSL
        ++P+ K LF  KPN   LKV+GC C+PYLR Y  HK DFHT+KC+ +G S  HKG+KCL+SSGK+ ISR V FNE+ FP   MFS+ +
Subjt:  VNPHLKILFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSL

XP_030492909.1 uncharacterized protein LOC115709020 isoform X1 [Cannabis sativa]4.0e-2247.17Show/hide
Query:  KILFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLPSSWLLHP
        ++++K KPN   LK +G  C+P LRPY  HKF FH+ KC+NLG S   KG+KCL+S+G++ ISR+V FNEQ+FP    F N+  P+HS+I   S+W   P
Subjt:  KILFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLPSSWLLHP

Query:  TFNDYS
          + ++
Subjt:  TFNDYS

TrEMBL top hitse value%identityAlignment
A0A5C7HIM7 Integrase catalytic domain-containing protein1.4e-2054.95Show/hide
Query:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLP
        LF  KPN   LK +GC C+PYLR Y  HKFDFH+ KCI LG S  HKG+KCL  SGKI +SR+V FNE +FP   +FS  ++ + S   LP
Subjt:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLP

A0A5C7HJ99 Integrase catalytic domain-containing protein1.4e-2054.95Show/hide
Query:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLP
        LF  KPN   LK +GC C+PYLR Y  HKFDFH+ KCI LG S  HKG+KCL  SGKI +SR+V FNE +FP   +FS  ++ + S   LP
Subjt:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLP

A0A5C7HMG8 Integrase catalytic domain-containing protein1.4e-2054.95Show/hide
Query:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLP
        LF  KPN   LK +GC C+PYLR Y  HKFDFH+ KCI LG S  HKG+KCL  SGKI +SR+V FNE +FP   +FS  ++ + S   LP
Subjt:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLP

A0A5C7IA41 Integrase catalytic domain-containing protein2.8e-2156.04Show/hide
Query:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLP
        LF  KPN   LK +GC C+PYLR Y  HKFDFH+ KCI LG S  HKG+KCL  SGKI +SR+V FNE +FP   +FS  +N + S  +LP
Subjt:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLP

A0A5C7ICA4 Integrase catalytic domain-containing protein8.2e-2156.82Show/hide
Query:  VNPHLKILFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSL
        ++P+ K LF  KPN   LKV+GC C+PYLR Y  HK DFHT+KC+ +G S  HKG+KCL+SSGK+ ISR V FNE+ FP   MFS+ +
Subjt:  VNPHLKILFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSL

SwissProt top hitse value%identityAlignment
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.0e-1243.9Show/hide
Query:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCL-TSSGKIIISRYVQFNEQDFPSSYMFSNSL
        LF   PN   L+V+GC CYP+LRPY  HK D  +++C+ LG S     + CL   + ++ ISR+V+F+E  FP    FSN L
Subjt:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCL-TSSGKIIISRYVQFNEQDFPSSYMFSNSL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.5e-1134Show/hide
Query:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCL-TSSGKIIISRYVQFNEQDFP-SSYMFSNSLNPKHSIINLPSSWLLHP
        LF   PN   LKV+GC CYP+LRPY  HK +  +K+C  +G S     + CL   +G++  SR+VQF+E+ FP S+  F  S + +    + P +W  H 
Subjt:  LFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCL-TSSGKIIISRYVQFNEQDFP-SSYMFSNSLNPKHSIINLPSSWLLHP

Query:  TFNDYSLIHMSPISHLQIPAHYHHV-LIQLPPLLPHQLIQAQLFRLHLPT
        T     L+  +P      P    H+     PP  P  L   Q+   +LP+
Subjt:  TFNDYSLIHMSPISHLQIPAHYHHV-LIQLPPLLPHQLIQAQLFRLHLPT

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAATCCCCATCTAAAAATCCTCTTTAAAATTAAACCAAACCTCACAAATTTAAAAGTATATGGTTGTGGTTGTTATCCTTATTTAAGACCATATTTACCACACAA
GTTTGATTTTCATACCAAAAAATGCATCAACCTTGGCTTGAGCCCTTTACATAAAGGTTTTAAATGCCTCACCTCTTCAGGAAAAATAATTATTTCCCGATATGTTCAAT
TTAATGAACAAGATTTTCCATCCTCATATATGTTTTCTAATTCTTTGAATCCCAAACATTCTATAATCAACCTACCATCATCTTGGCTACTGCACCCCACTTTTAATGAC
TACTCCCTAATTCACATGAGCCCAATTTCACATCTTCAAATCCCAGCCCATTATCACCATGTACTAATCCAGCTGCCACCTCTTCTCCCTCACCAGCTGATCCAAGCCCA
GTTATTTCGTCTCCATTTGCCCACTCCAACCTAA
mRNA sequenceShow/hide mRNA sequence
GCTCTAATTACCTCCACTGATGGATACAGATATTACATACTTTTTGTTGATGATTTTAGCAGGTATAGTTGGATCTACCCTCTTAAACAAAAGAGTAGAGCCTTTGAAGT
GTTCAGACACTTTATTACTTATGTGAAAACTCAGTTCTCCAAAACCATCAAAGCCTTTCAATCAGACAATGGTGGTGAGTTTATTCCAATTCATAAGTTGTGTAATTAAA
TGAGTATTATATCAAGATATTCATGTCTCTATACTTCCATTCAAAATGGACGTGTTGAAAGAAAACATCGTCATGTGGTTGAAACTGGACTTACATTGTTGGCCTAAGCA
ACTTTACCTTTTTATCTTTGGTGGGATTCTTTCTTAATTGCTACCATGCTAATAAACACAAGGCCAACAAAGGTGCTAAATGGTAAATCCCCATCTAAAAATCCTCTTTA
AAATTAAACCAAACCTCACAAATTTAAAAGTATATGGTTGTGGTTGTTATCCTTATTTAAGACCATATTTACCACACAAGTTTGATTTTCATACCAAAAAATGCATCAAC
CTTGGCTTGAGCCCTTTACATAAAGGTTTTAAATGCCTCACCTCTTCAGGAAAAATAATTATTTCCCGATATGTTCAATTTAATGAACAAGATTTTCCATCCTCATATAT
GTTTTCTAATTCTTTGAATCCCAAACATTCTATAATCAACCTACCATCATCTTGGCTACTGCACCCCACTTTTAATGACTACTCCCTAATTCACATGAGCCCAATTTCAC
ATCTTCAAATCCCAGCCCATTATCACCATGTACTAATCCAGCTGCCACCTCTTCTCCCTCACCAGCTGATCCAAGCCCAGTTATTTCGTCTCCATTTGCCCACTCCAACC
TAAGTCCTTTGGCCCATTATCGTACGTCTCCAGTGGCCCAACCACTTTTCATCATCGGGCCAACCTTTCATCCACCCTACTTCTTCACTTATTGACTCTTTCTCCCTCAG
CCTGTCTAATTTAAATGCTGCCGACATTTCCCATATTTCACCTTCTTCTTCCTCATCTCCAAGTCCTTTGTTGATCTTCCGTTCTGACAACTTATCTGCCAGTTTCTGTC
CAAATACCATACCTTTGCCTTCTCATCTTATGACTACGCGGGCTAAAGCGGGCATATTCAAACCAAAAACTCTTTTCTCCACGTCCTTGATTGACTGGTCACTCACAAAG
CCGACGAGGGTTAAGGATGCTTTGGCTACTCTCTCTTGGAAACAAGCGATGGAACGATGAGTATAATGCTCTAGTCAAAAATCAAACATGGCAGCTAGTTCCACCATCTT
CGAATTTGAATGTGATTGGCAGTAAGTGGGTTTTTAGAATTAAGAGGAACAAAGATGGGACGATTAAATGGTATAAGGCACGACTTGTTGCTAAGGGGTTTCACTAAAAC
CTGAGTGTTGATTTCTTTGAAACATTCAGTT
Protein sequenceShow/hide protein sequence
MVNPHLKILFKIKPNLTNLKVYGCGCYPYLRPYLPHKFDFHTKKCINLGLSPLHKGFKCLTSSGKIIISRYVQFNEQDFPSSYMFSNSLNPKHSIINLPSSWLLHPTFND
YSLIHMSPISHLQIPAHYHHVLIQLPPLLPHQLIQAQLFRLHLPTPT