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Cmc03g0065771 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0065771
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTranscription initiation factor TFIID subunit 11-like
Genome locationCMiso1.1chr03:7372871..7383336
RNA-Seq ExpressionCmc03g0065771
SyntenyCmc03g0065771
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066209.1 acidic repeat-containing protein [Cucumis melo var. makuwa]6.8e-9195.5Show/hide
Query:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNR+EEVAFDAKRKP DSCFQ KEE SNKIQKLEVVEGEESCNYVKNNAENGDHKGSDE+IDNVSSTVLEGKDDDGVDGASLDA DEEEDYEDE+D
Subjt:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSDA
        SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDD+DEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDLANDDDDSSDSDA
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSDA
XP_004150738.1 nucleolin [Cucumis sativus]1.1e-8893Show/hide
Query:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNREEEVAFDAKRKP DSCFQ KEERSNKIQKLEVVEGEESCNYV NNAENGDHKGSDE++DN+SSTVLEGK DDGVDGASLDA DEEEDYEDE+D
Subjt:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSDA
        SEDDEKSS KVA DRKGKGIMKDDKGKGKLIEEDDD+DEDSSDDGS LDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDL NDDDDSSDSDA
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSDA
XP_008441603.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo]3.6e-9296Show/hide
Query:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNREEEVAFD KRKPVDSCFQ K+ERSNKIQKLEVV GEESC+YVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
Subjt:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSDA
        SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDS+ESDLSDDPLAEVDLDNILPSRTRRRTVHPGVY+ TDLANDDDDSSDSDA
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSDA
XP_008463121.1 PREDICTED: acidic repeat-containing protein [Cucumis melo]2.2e-8994.55Show/hide
Query:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNR+EEVAFDAKRKP DSCFQ KEE SNKIQKLEVVEGEESCNYVKNNAENGDHKGSDE+IDNVSSTVLEGKDDDGVDGASLDA DEEEDYEDE+D
Subjt:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEE--DDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDS
        SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEE  DDD+DEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDLANDDDDSSDS
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEE--DDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDS

Query:  DA
        DA
Subjt:  DA
XP_038906649.1 pheromone-processing carboxypeptidase KEX1 [Benincasa hispida]2.9e-7383.58Show/hide
Query:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGD-HKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEN
        MAE T   EEVAFDAKRKP D C + KEERSNK+QKLEVVEGEESCN VK N ENGD HK +DE IDNVSS+V EGKDDDGV GA LDA DE ED EDE+
Subjt:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGD-HKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEN

Query:  DSEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSD
        DSE+ EKSSGK A DRKGKGIMKDDKGKGKLIEEDDD+DEDSSDDGS+LDSEESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL NDDDDSSDSD
Subjt:  DSEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSD

Query:  A
        A
Subjt:  A
TrEMBL top hitse value%identityAlignment
A0A0A0KMR8 Uncharacterized protein5.2e-8993Show/hide
Query:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNREEEVAFDAKRKP DSCFQ KEERSNKIQKLEVVEGEESCNYV NNAENGDHKGSDE++DN+SSTVLEGK DDGVDGASLDA DEEEDYEDE+D
Subjt:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSDA
        SEDDEKSS KVA DRKGKGIMKDDKGKGKLIEEDDD+DEDSSDDGS LDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDL NDDDDSSDSDA
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSDA
A0A1S3B3S7 transcription initiation factor TFIID subunit 11-like1.7e-9296Show/hide
Query:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNREEEVAFD KRKPVDSCFQ K+ERSNKIQKLEVV GEESC+YVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
Subjt:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSDA
        SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDS+ESDLSDDPLAEVDLDNILPSRTRRRTVHPGVY+ TDLANDDDDSSDSDA
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSDA
A0A1S3CIW7 acidic repeat-containing protein1.1e-8994.55Show/hide
Query:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNR+EEVAFDAKRKP DSCFQ KEE SNKIQKLEVVEGEESCNYVKNNAENGDHKGSDE+IDNVSSTVLEGKDDDGVDGASLDA DEEEDYEDE+D
Subjt:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEE--DDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDS
        SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEE  DDD+DEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDLANDDDDSSDS
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEE--DDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDS

Query:  DA
        DA
Subjt:  DA
A0A5D3B8T5 Transcription initiation factor TFIID subunit 11-like1.7e-9296Show/hide
Query:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNREEEVAFD KRKPVDSCFQ K+ERSNKIQKLEVV GEESC+YVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
Subjt:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSDA
        SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDS+ESDLSDDPLAEVDLDNILPSRTRRRTVHPGVY+ TDLANDDDDSSDSDA
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSDA
A0A5D3E1E7 Acidic repeat-containing protein3.3e-9195.5Show/hide
Query:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND
        MAEITNR+EEVAFDAKRKP DSCFQ KEE SNKIQKLEVVEGEESCNYVKNNAENGDHKGSDE+IDNVSSTVLEGKDDDGVDGASLDA DEEEDYEDE+D
Subjt:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDEND

Query:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSDA
        SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDD+DEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDLANDDDDSSDSDA
Subjt:  SEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSDA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12830.1 unknown protein1.0e-2342.08Show/hide
Query:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKG---------SDEEIDNVSSTVLEGKDDDGVDG---ASLDA
        MA++ N+++  +F  KRK  D   Q ++  +NK QKL       S N   + +++G+  G         S EE     S+VL  K  + V+      + A
Subjt:  MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKG---------SDEEIDNVSSTVLEGKDDDGVDG---ASLDA

Query:  RDEEEDYEDENDSEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSD----LDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYF
         +E+ED EDE + +++E+   +V  DRKGKGI ++DKGKGK+IE ++ +DED SDD  D     + +ESD SDDPLAEVDLDNILPSRTRRR+  PGV+ 
Subjt:  RDEEEDYEDENDSEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSD----LDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYF

Query:  ATDLAN-----DDDDSSDSDA
          + +N     +DD+SSDSDA
Subjt:  ATDLAN-----DDDDSSDSDA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAATTACCAATAGAGAGGAGGAGGTCGCATTTGATGCGAAGCGAAAACCTGTTGATTCTTGCTTCCAACTGAAAGAGGAGCGTTCAAACAAAATTCAG
AAGCTCGAAGTGGTTGAGGGTGAAGAATCCTGTAATTATGTGAAGAACAATGCTGAGAATGGTGATCATAAGGGAAGTGATGAAGAGATTGATAATGTTTCGTCT
ACGGTTCTGGAAGGGAAGGATGACGATGGAGTTGATGGAGCTAGTTTAGACGCGAGAGATGAGGAGGAGGATTATGAGGATGAAAACGATAGTGAGGATGACGAA
AAATCGAGTGGGAAAGTGGCTGCGGATCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGATGACGACAACGATGAGGAT
TCCAGTGATGATGGAAGCGACTTGGATTCTGAAGAGAGCGATTTGTCGGATGATCCACTTGCGGAGGTCGATTTGGACAACATCCTTCCTTCAAGGACGAGGAGG
CGAACGGTTCACCCTGGAGTTTATTTCGCTACGGATCTGGCAAACGACGATGATGATAGCAGTGATAGCGATGCTTGA
mRNA sequenceShow/hide mRNA sequence
AGAGAAAATTTCTCCCTTCTTCTCCTTCTTCATTCTTCGAGAGAGGAGTTCAAAAAAAAATTCTTCTTTCTTCTTCTTCTCCTCGCCCATTCCCTCATCCCAGGG
TCCTCTCTTCCTATTTCTCCATCGCTCCCTTACACTCACCGTCCTTCTCTTCCATCGTCTAGCAGCCCATGGTCGACAGAAGTCCTGCCGCTGCACACTTTTGGT
TTTTATTTCGATTTGAGCTTCTCAAGAAGATCTAAGAGGCCAAATTGAAGTGGGAAAAGCGTAAAATCCCAGGGGATCGAGTAATTGATTGCCAAATTGAAGTGG
GAAAAGCGTATAATCCCAGGGGATCGAGTAATTGATTCACCACCTACGGTTGTCAGGGGATTCCGGGGCTGAAAGAGGCCGTGACTGGAGAGCCGAGAACTTGAG
CCTACGTGAGGACATGGATGGAGGATTGTGACATGGCTTCGGGCCTAGCTTAAACCATGGTTTGGTGGCTCTATGTGCACATAGGAGCGGTATGTTGTTACCGTG
GTAGGTGCTAAGTATGCGTGAGCTCCGTTTGGCCGCGTGTTTCCTTGTGGATTGGATCACGTGTGAGCTATCCTTGGGCCGTATGCTTAGTATGCTATCATGGAT
GGATTGGATAGGTTGGATCGGATTGGATGGAGGTTGTTATCCTGGCGGGTACTAAATATGCGTGAGCTAGTTTTGGCTGCATGATTTTTAGTCATGTGCGAGCTA
TCTTTGGCCGTATATTTAGATGCCTTGCCATGGTTGATTTGGATACAGGTAACGATTAAGGACCAAGCATTGGTTGTGCTTTCCTGGCAGTGGTTGTAGTATCTC
ATTGTGTAGTATATACTTATGCATTCTATTGTATTATTGGGTTATTAGAAGAAACGAGAGTCATGATGAGAATTTGAGTCTGAGAGGTCTTTTATTAAATTGTAA
TTCTTTTGTAACTAGTTCGTAGTTGAATATAAACTTTGTTTGGGAATCTGGATTATGTTGGATGAGTGTGTGGTGAGATACACTCGAGGATAATTGAGTTTTGAA
GAGTATAGAAGTGTGTCTTTCTTCTATTTTCCAGGTTTTGAAGCTTCTTCAATTGTGTACCGGTTTTGCGCCAAATTAAATGGCAGAAATTACCAATAGAGAGGA
GGAGGTCGCATTTGATGCGAAGCGAAAACCTGTTGATTCTTGCTTCCAACTGAAAGAGGAGCGTTCAAACAAAATTCAGAAGCTCGAAGTGGTTGAGGGTGAAGA
ATCCTGTAATTATGTGAAGAACAATGCTGAGAATGGTGATCATAAGGGAAGTGATGAAGAGATTGATAATGTTTCGTCTACGGTTCTGGAAGGGAAGGATGACGA
TGGAGTTGATGGAGCTAGTTTAGACGCGAGAGATGAGGAGGAGGATTATGAGGATGAAAACGATAGTGAGGATGACGAAAAATCGAGTGGGAAAGTGGCTGCGGA
TCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGATGACGACAACGATGAGGATTCCAGTGATGATGGAAGCGACTTGGA
TTCTGAAGAGAGCGATTTGTCGGATGATCCACTTGCGGAGGTCGATTTGGACAACATCCTTCCTTCAAGGACGAGGAGGCGAACGGTTCACCCTGGAGTTTATTT
CGCTACGGATCTGGCAAACGACGATGATGATAGCAGTGATAGCGATGCTTGAAACGTTCAAGAAGGTCAGTAAAATTTGACAATCGAACCTTGGAGTTAGTACAA
CTGATATGAGTTGATGTTTCTCAGCTTTATCTTCTTTAGGGATAATGCAGCAATGTAATGAGTTACTCCAACAATTTTATTTTTAAGGTTACATGTTTTCTTGTT
TTCCCACTTTGGTATCGGTAGCATTGAGGATTGCTTGCACCTATGGCTTTCGTTAATATGCCTTTTTCTTAGAAGTTCTTATTTGTAGGGGGATTGTACTCATCA
ATCTTAACTGTAAGCCAAAATTAATAGATAGCAATGGAGTTTGTAACATTTGATTTTTCACTTATTGGATATGTTAGTGATGCCAATACTCTTGCACATTGAAAA
GAAGTTTCTTGAGATTTAGAACATCACTTCTAAGCACCAACCATTATT
Protein sequenceShow/hide protein sequence
MAEITNREEEVAFDAKRKPVDSCFQLKEERSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEEIDNVSSTVLEGKDDDGVDGASLDARDEEEDYEDENDSEDDE
KSSGKVAADRKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLANDDDDSSDSDA