; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0065941 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0065941
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr03:7660602..7661291
RNA-Seq ExpressionCmc03g0065941
SyntenyCmc03g0065941
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-11290.39Show/hide
Query:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV
        MRRIPY S V SLMY ML TRPDICYAVGIVSRYQSN GLDHWT VKI+LKYLRRTRDYMLVYGAKDLIL GYTDSDFQT+KDSRKS SG VFTLNGGAV
Subjt:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN
        VWRSIKQGCIADSTMEA+YVAACEAAKEAVWL KFL+DLEVVPNMNLPITLYCDN+G VA SKEP SHK+GKHI+RKYHLIREIVQR DVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN

Query:  IADPFTKTLTAKVFEGHLESLGLRDMYIR
        IADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  IADPFTKTLTAKVFEGHLESLGLRDMYIR

KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa]2.3e-11189.96Show/hide
Query:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV
        MRRIPY S V SLMY ML TRPDICYAVGIVSRYQSN GLDHWT VKIILKYLRRTRDYMLVYGAKDLIL GYT+SDFQT+KDSRKS S  VFTLNGGAV
Subjt:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN
        VWRSIKQGCIADSTMEA+YVAACEAAKEAVWL KFL+DLEVVPNMNLPITLYCDN+G VA SKEP SHK+GKHI+RKYHLIREIVQR DVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN

Query:  IADPFTKTLTAKVFEGHLESLGLRDMYIR
        IADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  IADPFTKTLTAKVFEGHLESLGLRDMYIR

KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa]3.2e-11391.27Show/hide
Query:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV
        MRRIPY S V SLMYVML TRPDICYAVGIVSRYQSN GLDHWT VKIILKYLRRTRDYMLVYGAKDLIL GYTDSDFQT+KDSRKS SG VFTLNGGAV
Subjt:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN
        VWRSIKQGCIADSTMEA+YVAACEAAKEAVWL KFL+DLEVVPNMNLPITLYCDN+G VA SKEP SHK+GKHI+RKYHLIREIVQR DVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN

Query:  IADPFTKTLTAKVFEGHLESLGLRDMYIR
        IADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  IADPFTKTLTAKVFEGHLESLGLRDMYIR

KAA0055518.1 gag/pol protein [Cucumis melo var. makuwa]5.5e-11392.14Show/hide
Query:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV
        MRRIPY SVV SLM+ ML TRPDICYAVGIVSRYQSNL L HWT VKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQT+KDSRKS SGLVFTLNGGAV
Subjt:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN
        VWRSIKQGCIADSTMEAKYVAACEAAKEAVWL KFLYDLEVVPNMNL ITLYCDNTGTVA SKEPHSHK+GKHI+RKY+LIREIVQREDVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN

Query:  IADPFTKTLTAKVFEGHLESLGLRDMYIR
        I D FTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  IADPFTKTLTAKVFEGHLESLGLRDMYIR

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-11290.39Show/hide
Query:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV
        MRRIPY S V SLMY ML TRPDICYAVGIVSRYQSN GLDHWT VKI+LKYLRRTRDYMLVYGAKDLIL GYTDSDFQT+KDSRKS SG VFTLNGGAV
Subjt:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN
        VWRSIKQGCIADSTMEA+YVAACEAAKEAVWL KFL+DLEVVPNMNLPITLYCDN+G VA SKEP SHK+GKHI+RKYHLIREIVQR DVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN

Query:  IADPFTKTLTAKVFEGHLESLGLRDMYIR
        IADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  IADPFTKTLTAKVFEGHLESLGLRDMYIR

TrEMBL top hitse value%identityAlignment
A0A5A7T2V9 Gag/pol protein1.1e-11189.96Show/hide
Query:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV
        MRRIPY S V SLMY ML TRPDICYAVGIVSRYQSN GLDHWT VKIILKYLRRTRDYMLVYGAKDLIL GYT+SDFQT+KDSRKS S  VFTLNGGAV
Subjt:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN
        VWRSIKQGCIADSTMEA+YVAACEAAKEAVWL KFL+DLEVVPNMNLPITLYCDN+G VA SKEP SHK+GKHI+RKYHLIREIVQR DVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN

Query:  IADPFTKTLTAKVFEGHLESLGLRDMYIR
        IADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  IADPFTKTLTAKVFEGHLESLGLRDMYIR

A0A5A7TKM4 Gag/pol protein1.6e-11391.27Show/hide
Query:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV
        MRRIPY S V SLMYVML TRPDICYAVGIVSRYQSN GLDHWT VKIILKYLRRTRDYMLVYGAKDLIL GYTDSDFQT+KDSRKS SG VFTLNGGAV
Subjt:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN
        VWRSIKQGCIADSTMEA+YVAACEAAKEAVWL KFL+DLEVVPNMNLPITLYCDN+G VA SKEP SHK+GKHI+RKYHLIREIVQR DVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN

Query:  IADPFTKTLTAKVFEGHLESLGLRDMYIR
        IADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  IADPFTKTLTAKVFEGHLESLGLRDMYIR

A0A5A7TZD0 Gag/pol protein6.0e-11390.39Show/hide
Query:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV
        MRRIPY S V SLMY ML TRPDICYAVGIVSRYQSN GLDHWT VKI+LKYLRRTRDYMLVYGAKDLIL GYTDSDFQT+KDSRKS SG VFTLNGGAV
Subjt:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN
        VWRSIKQGCIADSTMEA+YVAACEAAKEAVWL KFL+DLEVVPNMNLPITLYCDN+G VA SKEP SHK+GKHI+RKYHLIREIVQR DVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN

Query:  IADPFTKTLTAKVFEGHLESLGLRDMYIR
        IADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  IADPFTKTLTAKVFEGHLESLGLRDMYIR

A0A5A7UKE5 Gag/pol protein2.7e-11392.14Show/hide
Query:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV
        MRRIPY SVV SLM+ ML TRPDICYAVGIVSRYQSNL L HWT VKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQT+KDSRKS SGLVFTLNGGAV
Subjt:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN
        VWRSIKQGCIADSTMEAKYVAACEAAKEAVWL KFLYDLEVVPNMNL ITLYCDNTGTVA SKEPHSHK+GKHI+RKY+LIREIVQREDVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN

Query:  IADPFTKTLTAKVFEGHLESLGLRDMYIR
        I D FTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  IADPFTKTLTAKVFEGHLESLGLRDMYIR

A0A5A7UYE8 Gag/pol protein6.0e-11390.39Show/hide
Query:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV
        MRRIPY S V SLMY ML TRPDICYAVGIVSRYQSN GLDHWT VKI+LKYLRRTRDYMLVYGAKDLIL GYTDSDFQT+KDSRKS SG VFTLNGGAV
Subjt:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN
        VWRSIKQGCIADSTMEA+YVAACEAAKEAVWL KFL+DLEVVPNMNLPITLYCDN+G VA SKEP SHK+GKHI+RKYHLIREIVQR DVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN

Query:  IADPFTKTLTAKVFEGHLESLGLRDMYIR
        IADPFTKTLTAKVFEGHLESLGLRDMYIR
Subjt:  IADPFTKTLTAKVFEGHLESLGLRDMYIR

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.7e-3538.57Show/hide
Query:  PYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYG---AKDLILIGYTDSDFQTNKDSRKSMSGLVFTL-NGGAV
        P  S++  LMY+ML TRPD+  AV I+SRY S    + W  +K +L+YL+ T D  L++    A +  +IGY DSD+  ++  RKS +G +F + +   +
Subjt:  PYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYG---AKDLILIGYTDSDFQTNKDSRKSMSGLVFTL-NGGAV

Query:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN
         W + +Q  +A S+ EA+Y+A  EA +EA+WL   L  + +   +  PI +Y DN G ++I+  P  HK+ KHI  KYH  RE VQ   + +  I +E+ 
Subjt:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN

Query:  IADPFTKTLTAKVFEGHLESLGL
        +AD FTK L A  F    + LGL
Subjt:  IADPFTKTLTAKVFEGHLESLGL

P0CV72 Secreted RxLR effector protein 1614.1e-2644.78Show/hide
Query:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVY-GAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGA
        M+ +PY+S V ++MY+M+ TRPD+  AVG++S++ S+    HW  +K +L+YL+ T+ Y L +  A    L+GY+D+D+  + +SR+S SG +F LNGG 
Subjt:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVY-GAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGA

Query:  VVWRSIKQGCIADSTMEAKYVAACEAAKEAVWLS
        V WRS KQ  +A S+ E +Y+A  EA +EAVWL+
Subjt:  VVWRSIKQGCIADSTMEAKYVAACEAAKEAVWLS

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-4745.29Show/hide
Query:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV
        M ++PY S V SLMY M+ TRPDI +AVG+VSR+  N G +HW  VK IL+YLR T    L +G  D IL GYTD+D   + D+RKS +G +FT +GGA+
Subjt:  MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAV

Query:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN
         W+S  Q C+A ST EA+Y+AA E  KE +WL +FL +L +         +YCD+   + +SK    H + KHI  +YH IRE+V  E + V KI++  N
Subjt:  VWRSIKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHN

Query:  IADPFTKTLTAKVFEGHLESLGL
         AD  TK +    FE   E +G+
Subjt:  IADPFTKTLTAKVFEGHLESLGL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.0e-2431.05Show/hide
Query:  YVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDY-MLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAVVWRS
        Y  +V SL Y + +TRPDI YAV  +S++      +H   +K IL+YL  T ++ + +     L L  Y+D+D+  +KD   S +G +  L    + W S
Subjt:  YVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDY-MLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAVVWRS

Query:  IKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHNIADP
         KQ  +  S+ EA+Y +    + E  W+   L +L +   +  P  +YCDN G   +   P  H + KHI   YH IR  VQ   + V  +++   +AD 
Subjt:  IKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHNIADP

Query:  FTKTLTAKVFEGHLESLGL
         TK L+   F+     +G+
Subjt:  FTKTLTAKVFEGHLESLGL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE27.0e-2631.51Show/hide
Query:  YVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDY-MLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAVVWRS
        Y  +V SL Y + +TRPD+ YAV  +S+Y      DHW  +K +L+YL  T D+ + +     L L  Y+D+D+  + D   S +G +  L    + W S
Subjt:  YVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDY-MLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAVVWRS

Query:  IKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHNIADP
         KQ  +  S+ EA+Y +    + E  W+   L +L +   ++ P  +YCDN G   +   P  H + KHI   YH IR  VQ   + V  +++   +AD 
Subjt:  IKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHNIADP

Query:  FTKTLTAKVFEGHLESLGL
         TK L+   F+     +G+
Subjt:  FTKTLTAKVFEGHLESLGL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.2e-2032.96Show/hide
Query:  YVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAK-DLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAVVWRS
        Y  ++  LMY+ + TR DI +AV  +S++     L H   V  IL Y++ T    L Y ++ ++ L  ++D+ FQ+ KD+R+S +G    L    + W+S
Subjt:  YVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAK-DLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAVVWRS

Query:  IKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIRE
         KQ  ++ S+ EA+Y A   A  E +WL++F  +L++   ++ P  L+CDNT  + I+     H++ KHI+   H +RE
Subjt:  IKQGCIADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACGTATTCCCTATGTCTCAGTTGTGGACAGCTTAATGTATGTTATGCTCTACACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAA
CCTAGGGTTAGACCACTGGACGATGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTATAGGATACA
CTGACTCTGATTTCCAAACCAATAAGGATTCTAGAAAATCTATGTCAGGATTAGTGTTCACTCTGAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATT
GCAGACTCTACAATGGAGGCTAAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGTAAGTTCCTATATGATTTGGAAGTTGTTCCAAACATGAACTT
GCCCATCACTTTATATTGTGATAACACTGGGACAGTAGCCATTTCTAAAGAACCTCACAGCCACAAACAAGGAAAACACATAAAGAGGAAGTATCACCTGATACGGGAGA
TTGTGCAACGAGAGGATGTCATCGTCACCAAGATCGCTTCAGAACACAACATTGCTGATCCATTTACGAAGACTCTTACGGCTAAAGTGTTTGAGGGTCATCTAGAAAGT
CTAGGTCTACGAGATATGTACATTAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACGTATTCCCTATGTCTCAGTTGTGGACAGCTTAATGTATGTTATGCTCTACACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAA
CCTAGGGTTAGACCACTGGACGATGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTATAGGATACA
CTGACTCTGATTTCCAAACCAATAAGGATTCTAGAAAATCTATGTCAGGATTAGTGTTCACTCTGAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATT
GCAGACTCTACAATGGAGGCTAAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGTAAGTTCCTATATGATTTGGAAGTTGTTCCAAACATGAACTT
GCCCATCACTTTATATTGTGATAACACTGGGACAGTAGCCATTTCTAAAGAACCTCACAGCCACAAACAAGGAAAACACATAAAGAGGAAGTATCACCTGATACGGGAGA
TTGTGCAACGAGAGGATGTCATCGTCACCAAGATCGCTTCAGAACACAACATTGCTGATCCATTTACGAAGACTCTTACGGCTAAAGTGTTTGAGGGTCATCTAGAAAGT
CTAGGTCTACGAGATATGTACATTAGGTAA
Protein sequenceShow/hide protein sequence
MRRIPYVSVVDSLMYVMLYTRPDICYAVGIVSRYQSNLGLDHWTMVKIILKYLRRTRDYMLVYGAKDLILIGYTDSDFQTNKDSRKSMSGLVFTLNGGAVVWRSIKQGCI
ADSTMEAKYVAACEAAKEAVWLSKFLYDLEVVPNMNLPITLYCDNTGTVAISKEPHSHKQGKHIKRKYHLIREIVQREDVIVTKIASEHNIADPFTKTLTAKVFEGHLES
LGLRDMYIR