; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0066031 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0066031
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPHD finger protein ALFIN-LIKE 3-like
Genome locationCMiso1.1chr03:7892152..7892554
RNA-Seq ExpressionCmc03g0066031
SyntenyCmc03g0066031
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0035064 - methylated histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR045104 - Alfin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032497.1 PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo var. makuwa]2.6e-3585.71Show/hide
Query:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV
        MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLN            RQSQ REEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFH KFVV
Subjt:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV

KAA0067842.1 PHD finger protein ALFIN-LIKE 3-like [Cucumis melo var. makuwa]5.6e-3887.76Show/hide
Query:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV
        M TVFEVVTNIAK+QVK+KSSTANGSKSKSS  + SEAEMQGTCARQSQAR+EVETYEED+DEH D LCRACGENYASDEFWICCDIYEKWFH KFVV
Subjt:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV

TYJ98373.1 PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo var. makuwa]7.0e-3383.67Show/hide
Query:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV
        MSTVFE VTNIAKKQVKQKSSTANGSKSKSSLN            RQS  REEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFH KFVV
Subjt:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV

XP_004141692.1 PHD finger protein ALFIN-LIKE 3 [Cucumis sativus]2.1e-3283.67Show/hide
Query:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVET-YEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFV
        + TVFEVVT IAKKQVK+KSSTANGSKSKSS  +  EAEMQG  ARQSQAREEVET YEEDEDEHGDTLC ACGENYASDEFWICCDI EKWFH K V
Subjt:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVET-YEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFV

XP_016903323.1 PREDICTED: PHD finger protein ALFIN-LIKE 3-like [Cucumis melo]5.6e-3887.76Show/hide
Query:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV
        M TVFEVVTNIAK+QVK+KSSTANGSKSKSS  + SEAEMQGTCARQSQAR+EVETYEED+DEH D LCRACGENYASDEFWICCDIYEKWFH KFVV
Subjt:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV

TrEMBL top hitse value%identityAlignment
A0A0A0K9L1 PHD-type domain-containing protein9.9e-3383.67Show/hide
Query:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVET-YEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFV
        + TVFEVVT IAKKQVK+KSSTANGSKSKSS  +  EAEMQG  ARQSQAREEVET YEEDEDEHGDTLC ACGENYASDEFWICCDI EKWFH K V
Subjt:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVET-YEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFV

A0A1S4E514 PHD finger protein ALFIN-LIKE 3-like2.7e-3887.76Show/hide
Query:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV
        M TVFEVVTNIAK+QVK+KSSTANGSKSKSS  + SEAEMQGTCARQSQAR+EVETYEED+DEH D LCRACGENYASDEFWICCDIYEKWFH KFVV
Subjt:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV

A0A5A7ST15 PHD finger protein ALFIN-LIKE 3-like isoform X21.3e-3585.71Show/hide
Query:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV
        MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLN            RQSQ REEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFH KFVV
Subjt:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV

A0A5A7VHJ0 PHD finger protein ALFIN-LIKE 3-like2.7e-3887.76Show/hide
Query:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV
        M TVFEVVTNIAK+QVK+KSSTANGSKSKSS  + SEAEMQGTCARQSQAR+EVETYEED+DEH D LCRACGENYASDEFWICCDIYEKWFH KFVV
Subjt:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV

A0A5D3BGJ5 PHD finger protein ALFIN-LIKE 3-like isoform X23.4e-3383.67Show/hide
Query:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV
        MSTVFE VTNIAKKQVKQKSSTANGSKSKSSLN            RQS  REEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFH KFVV
Subjt:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV

SwissProt top hitse value%identityAlignment
O81488 PHD finger protein ALFIN-LIKE 45.1e-1853.47Show/hide
Query:  MSTVFEVVTNIAKKQVKQKSSTANGS--KSKSSLNRYSE--AEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKF
        + T+FEVV   AKKQ K KSS +N S  +SKSS  R SE  A+      +  +  EE    EEDEDE G+T C ACGE+YA+DEFWICCD+ E WFH K 
Subjt:  MSTVFEVVTNIAKKQVKQKSSTANGS--KSKSSLNRYSE--AEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKF

Query:  V
        V
Subjt:  V

Q5XEM9 PHD finger protein ALFIN-LIKE 51.5e-1749.07Show/hide
Query:  TVFEVVTNIAKKQVKQKSSTAN-------------GSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYE
        TV+EVVT  A+KQ K+  S+AN             G +SKSS   +++ E +G      +  E  E  +EDEDEHG+TLC ACG+NYASDEFWICCD+ E
Subjt:  TVFEVVTNIAKKQVKQKSSTAN-------------GSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYE

Query:  KWFHEKFV
        KWFH + V
Subjt:  KWFHEKFV

Q8LA16 PHD finger protein ALFIN-LIKE 71.2e-1447.96Show/hide
Query:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQS-QAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFV
        + T+FEVVT  A KQ K +S+  N S+SKSS  +   +E     ++ S   R+E E+ +EDED+    +C ACG+NY  DEFWICCD  EKWFH K V
Subjt:  MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQS-QAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFV

Q9FFF5 PHD finger protein ALFIN-LIKE 19.0e-1545.92Show/hide
Query:  MSTVFEVVTNIAKKQVKQ-KSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFV
        + T+FEVVT   +K +K  K S   GSKS++ + R  E + + T       +   E+YE+++DEHGDTLC +CG NY +DEFWICCD+ E+W+H K V
Subjt:  MSTVFEVVTNIAKKQVKQ-KSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFV

Q9M2B4 PHD finger protein ALFIN-LIKE 35.6e-1752.58Show/hide
Query:  TVFEVVTNIAKKQVKQKSSTANGSKSKS-SLNRYSEAEMQGTCARQSQAREEVETY-EEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFV
        T+FEVVT +AK + K  ++  NG+KSKS S  R SE    G  ++  Q +EE E   E+DED+HG+TLC ACG++  +DEFWICCD+ EKWFH K V
Subjt:  TVFEVVTNIAKKQVKQKSSTANGSKSKS-SLNRYSEAEMQGTCARQSQAREEVETY-EEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFV

Arabidopsis top hitse value%identityAlignment
AT3G42790.1 alfin-like 34.0e-1852.58Show/hide
Query:  TVFEVVTNIAKKQVKQKSSTANGSKSKS-SLNRYSEAEMQGTCARQSQAREEVETY-EEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFV
        T+FEVVT +AK + K  ++  NG+KSKS S  R SE    G  ++  Q +EE E   E+DED+HG+TLC ACG++  +DEFWICCD+ EKWFH K V
Subjt:  TVFEVVTNIAKKQVKQKSSTANGSKSKS-SLNRYSEAEMQGTCARQSQAREEVETY-EEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFV

AT5G05610.1 alfin-like 16.4e-1645.92Show/hide
Query:  MSTVFEVVTNIAKKQVKQ-KSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFV
        + T+FEVVT   +K +K  K S   GSKS++ + R  E + + T       +   E+YE+++DEHGDTLC +CG NY +DEFWICCD+ E+W+H K V
Subjt:  MSTVFEVVTNIAKKQVKQ-KSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFV

AT5G05610.2 alfin-like 16.4e-1645.92Show/hide
Query:  MSTVFEVVTNIAKKQVKQ-KSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFV
        + T+FEVVT   +K +K  K S   GSKS++ + R  E + + T       +   E+YE+++DEHGDTLC +CG NY +DEFWICCD+ E+W+H K V
Subjt:  MSTVFEVVTNIAKKQVKQ-KSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFV

AT5G20510.1 alfin-like 51.1e-1849.07Show/hide
Query:  TVFEVVTNIAKKQVKQKSSTAN-------------GSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYE
        TV+EVVT  A+KQ K+  S+AN             G +SKSS   +++ E +G      +  E  E  +EDEDEHG+TLC ACG+NYASDEFWICCD+ E
Subjt:  TVFEVVTNIAKKQVKQKSSTAN-------------GSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYE

Query:  KWFHEKFV
        KWFH + V
Subjt:  KWFHEKFV

AT5G26210.1 alfin-like 43.6e-1953.47Show/hide
Query:  MSTVFEVVTNIAKKQVKQKSSTANGS--KSKSSLNRYSE--AEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKF
        + T+FEVV   AKKQ K KSS +N S  +SKSS  R SE  A+      +  +  EE    EEDEDE G+T C ACGE+YA+DEFWICCD+ E WFH K 
Subjt:  MSTVFEVVTNIAKKQVKQKSSTANGS--KSKSSLNRYSE--AEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKF

Query:  V
        V
Subjt:  V


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACTGTATTTGAAGTGGTCACCAATATTGCAAAGAAACAAGTTAAGCAAAAATCATCAACTGCAAATGGTAGCAAATCCAAGTCAAGTTTAAATCGGTATAGTGA
AGCTGAAATGCAAGGAACATGCGCAAGGCAGTCGCAGGCAAGGGAAGAGGTAGAGACATACGAAGAAGATGAAGACGAGCACGGTGACACCTTATGTAGGGCATGCGGTG
AGAACTATGCTTCAGATGAATTTTGGATTTGCTGTGATATCTATGAGAAATGGTTCCATGAGAAGTTTGTTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAACTGTATTTGAAGTGGTCACCAATATTGCAAAGAAACAAGTTAAGCAAAAATCATCAACTGCAAATGGTAGCAAATCCAAGTCAAGTTTAAATCGGTATAGTGA
AGCTGAAATGCAAGGAACATGCGCAAGGCAGTCGCAGGCAAGGGAAGAGGTAGAGACATACGAAGAAGATGAAGACGAGCACGGTGACACCTTATGTAGGGCATGCGGTG
AGAACTATGCTTCAGATGAATTTTGGATTTGCTGTGATATCTATGAGAAATGGTTCCATGAGAAGTTTGTTGTATGA
Protein sequenceShow/hide protein sequence
MSTVFEVVTNIAKKQVKQKSSTANGSKSKSSLNRYSEAEMQGTCARQSQAREEVETYEEDEDEHGDTLCRACGENYASDEFWICCDIYEKWFHEKFVV