; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0066041 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0066041
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr03:7931527..7932730
RNA-Seq ExpressionCmc03g0066041
SyntenyCmc03g0066041
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008194 - UDP-glycosyltransferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025917.1 pol protein [Cucumis melo var. makuwa]1.1e-22299.22Show/hide
Query:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV
        MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTE+VRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRR V
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

KAA0025998.1 pol protein [Cucumis melo var. makuwa]6.2e-21896.34Show/hide
Query:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV
        +VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTE+VRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

KAA0050760.1 pol protein [Cucumis melo var. makuwa]6.2e-21896.34Show/hide
Query:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV
        +VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTE+VRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

TYK01576.1 pol protein [Cucumis melo var. makuwa]6.2e-21896.34Show/hide
Query:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV
        +VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTE+VRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

TYK20443.1 pol protein [Cucumis melo var. makuwa]6.2e-21896.34Show/hide
Query:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV
        +VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTE+VRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

TrEMBL top hitse value%identityAlignment
A0A5A7SIJ5 Reverse transcriptase3.0e-21896.34Show/hide
Query:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV
        +VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTE+VRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

A0A5A7TP01 Reverse transcriptase5.3e-22399.22Show/hide
Query:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV
        MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTE+VRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRR V
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

A0A5A7U6G5 Reverse transcriptase3.0e-21896.34Show/hide
Query:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV
        +VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTE+VRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

A0A5D3BTN0 Reverse transcriptase3.0e-21896.34Show/hide
Query:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV
        +VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTE+VRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

A0A5D3C6W3 Reverse transcriptase3.0e-21896.34Show/hide
Query:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV
        +VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSV
Subjt:  MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSV

Query:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH
        PGWKWESVSMDFITGLPKT+KGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTE+VRLHGVPVSIVSDRDARFTSKFW+GLQ+ALGTRLDFSTAFH
Subjt:  PGWKWESVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFH

Query:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
        PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS
Subjt:  PQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQS

Query:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV
        RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRF KKGKLSPRFVGPFEILERIGPVAYRLALPPS +AVHDVFH+SMLR+ V
Subjt:  RQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSV

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein8.6e-5332.8Show/hide
Query:  EFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWE
        E +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WE
Subjt:  EFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWE

Query:  SVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQ
        S+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   V+   G P  I++D D  FTS+ W+         + FS  + PQTDGQ
Subjt:  SVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQ

Query:  TERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSY
        TER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y
Subjt:  TERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSY

Query:  ADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR
         D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  ADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR

P0CT35 Transposon Tf2-2 polyprotein8.6e-5332.8Show/hide
Query:  EFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWE
        E +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WE
Subjt:  EFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWE

Query:  SVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQ
        S+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   V+   G P  I++D D  FTS+ W+         + FS  + PQTDGQ
Subjt:  SVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQ

Query:  TERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSY
        TER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y
Subjt:  TERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSY

Query:  ADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR
         D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  ADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR

P0CT36 Transposon Tf2-3 polyprotein8.6e-5332.8Show/hide
Query:  EFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWE
        E +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WE
Subjt:  EFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWE

Query:  SVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQ
        S+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   V+   G P  I++D D  FTS+ W+         + FS  + PQTDGQ
Subjt:  SVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQ

Query:  TERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSY
        TER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y
Subjt:  TERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSY

Query:  ADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR
         D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  ADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR

P0CT41 Transposon Tf2-12 polyprotein8.6e-5332.8Show/hide
Query:  EFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWE
        E +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WE
Subjt:  EFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWE

Query:  SVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQ
        S+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   V+   G P  I++D D  FTS+ W+         + FS  + PQTDGQ
Subjt:  SVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQ

Query:  TERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSY
        TER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y
Subjt:  TERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSY

Query:  ADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR
         D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  ADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR

Q9UR07 Transposon Tf2-11 polyprotein8.6e-5332.8Show/hide
Query:  EFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWE
        E +I   DGL+   +  + +P D+ +   ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WE
Subjt:  EFSISSDDGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWE

Query:  SVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQ
        S+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   V+   G P  I++D D  FTS+ W+         + FS  + PQTDGQ
Subjt:  SVSMDFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQ

Query:  TERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSY
        TER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y
Subjt:  TERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSY

Query:  ADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR
         D++ +++ EF+ GD+V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L +
Subjt:  ADVRRKDL-EFEVGDMVFLKVAPMKGVLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRR

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGAGACGGAGCAAGGTGAAGAGTTCTCTATATCCTCTGATGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACAGAGCTTTT
GACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTAGCAGAGT
TCGTCAGTAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATG
GACTTTATCACGGGACTGCCCAAGACCATGAAGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGACAGCCCACTTCGTGCCAGGGAAATCCACGTACAC
TGCCAGCAAGTGGGGGCAGTTATACATGACGGAAGTAGTAAGACTGCACGGAGTACCAGTATCCATCGTTTCAGACAGGGATGCCCGTTTCACTTCGAAATTTTGGCAAG
GGCTCCAACTTGCATTAGGTACGAGGCTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGACTGAACCAGATTTTGGAGGATATGCTGCGGGCC
TGTGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCACCTGCATCTAATGGAGTTCGCCTATAATAACAGTTACCAGGCTACCATTGGTATGGCTCCGTTTGAGGCTCTGTA
TGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAATGCAGCCATACAGAAGATCCGAGCTC
GAATGCTGACCGCACAGAGCAGACAGAAGAGTTACGCTGATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTTTGAAGGTAGCACCGATGAAGGGC
GTTCTGAGGTTCGAGAAGAAGGGGAAGTTGAGTCCACGTTTCGTGGGGCCATTTGAGATACTGGAACGGATTGGCCCTGTGGCTTATCGTTTGGCCTTGCCCCCATCCCT
CTCAGCAGTGCATGACGTATTCCATGTCTCCATGTTGAGGAGGTCAGTGAGAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGAGACGGAGCAAGGTGAAGAGTTCTCTATATCCTCTGATGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACAGAGCTTTT
GACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTAGCAGAGT
TCGTCAGTAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATG
GACTTTATCACGGGACTGCCCAAGACCATGAAGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGACAGCCCACTTCGTGCCAGGGAAATCCACGTACAC
TGCCAGCAAGTGGGGGCAGTTATACATGACGGAAGTAGTAAGACTGCACGGAGTACCAGTATCCATCGTTTCAGACAGGGATGCCCGTTTCACTTCGAAATTTTGGCAAG
GGCTCCAACTTGCATTAGGTACGAGGCTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGACTGAACCAGATTTTGGAGGATATGCTGCGGGCC
TGTGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCACCTGCATCTAATGGAGTTCGCCTATAATAACAGTTACCAGGCTACCATTGGTATGGCTCCGTTTGAGGCTCTGTA
TGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACTACCAATGCAGCCATACAGAAGATCCGAGCTC
GAATGCTGACCGCACAGAGCAGACAGAAGAGTTACGCTGATGTACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTTTGAAGGTAGCACCGATGAAGGGC
GTTCTGAGGTTCGAGAAGAAGGGGAAGTTGAGTCCACGTTTCGTGGGGCCATTTGAGATACTGGAACGGATTGGCCCTGTGGCTTATCGTTTGGCCTTGCCCCCATCCCT
CTCAGCAGTGCATGACGTATTCCATGTCTCCATGTTGAGGAGGTCAGTGAGAACTTGA
Protein sequenceShow/hide protein sequence
MVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSM
DFITGLPKTMKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEVVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRA
CVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKG
VLRFEKKGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRRSVRT