| GenBank top hits | e value | %identity | Alignment |
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| ABI34306.1 Polyprotein, putative [Solanum demissum] | 5.0e-58 | 55.09 | Show/hide |
Query: SNTYLFTLTKNNVFVGKGYATNGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTE
SN Y+ + K +FVGKGYA +GMFKLN+E+NK ++S YML+S N WHARLCH+N R + MS L LI + +FEKC C++AK TK H V R T+
Subjt: SNTYLFTLTKNNVFVGKGYATNGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTE
Query: PLELIHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSP
LEL+H+D+ E LTR RY ITF+DD S +T++YL+KNKSDA++ FK ++ E+ENQF IKR+RSDRG EY+ FN F S GIIHE PYSP
Subjt: PLELIHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSP
Query: EMNGKAERNNITLTEL
NG AER N TL EL
Subjt: EMNGKAERNNITLTEL
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| KAA0034938.1 putative Polyprotein [Cucumis melo var. makuwa] | 8.7e-103 | 88.84 | Show/hide |
Query: LFTLTKNNVFVGKGYATNGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTEPLEL
LFTLTKNNVFVGKGYAT+GMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLI KLSLHDFEKCACC+QAK TKTSHKFVTRVT+PLEL
Subjt: LFTLTKNNVFVGKGYATNGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTEPLEL
Query: IHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNG
IHSDL EFD TLTRNSKRYV+TF+DD S+YTFIYLLKNKSDAY+MFKVFVTEIENQFN+ IKRLRSDRGTEYD VAFNEFYNS GIIHE TPYSPEMNG
Subjt: IHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNG
Query: KAERNNITLTELVLS
K ER N TLTEL ++
Subjt: KAERNNITLTELVLS
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| KAA0046026.1 putative Polyprotein [Cucumis melo var. makuwa] | 2.7e-51 | 90.68 | Show/hide |
Query: LFTLTKNNVFVGKGYATNGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTEPLEL
LFTLTKNNV+VGKGYAT+GMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLI KLSLHDFEKCACC+QAK T+TSHK VT VT PLEL
Subjt: LFTLTKNNVFVGKGYATNGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTEPLEL
Query: IHSDLYEFDETLTRNSKR
IHSDL EFD TLTRNSKR
Subjt: IHSDLYEFDETLTRNSKR
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| KAG5527251.1 hypothetical protein RHGRI_028223 [Rhododendron griersonianum] | 1.1e-49 | 52.61 | Show/hide |
Query: LTKNNVFVGKGYATNGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHD--FEKCACCNQAKRTKTSHKFVTRVTEPLELI
LTKN +FVGKGY NGMFKL++ N ASS Y++ SF++WH+RL H+N R I NMSR LI + HD +KC C +AK K S V R +E L+LI
Subjt: LTKNNVFVGKGYATNGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHD--FEKCACCNQAKRTKTSHKFVTRVTEPLELI
Query: HSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNGK
HSD+ E + LTR KRY TFVDD S YTF+YLL+ K + + F+ + E+ENQ N+ IK LRSDRG EY F++F +GIIH+ PYSP+ NG
Subjt: HSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNGK
Query: AERNNITLTEL
AER N TLTE+
Subjt: AERNNITLTEL
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| XP_021732277.1 uncharacterized protein LOC110699091 [Chenopodium quinoa] | 1.1e-49 | 69.86 | Show/hide |
Query: LFTLTKNNVFVGKGYATNGMFKLNLEINKIASSAYMLTS-FNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTEPLE
LFTLTKN +FVGKGYAT+GMFKLN+E+NKI++SAYML S NVWH RLCHVNKRLI NMS L LI +SL+DF+KC C+QAK TKT HK V R +EPL+
Subjt: LFTLTKNNVFVGKGYATNGMFKLNLEINKIASSAYMLTS-FNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTEPLE
Query: LIHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKM
LIHSD+ E + TLTRN +RY ITF+DD S+YT IYL+KNKSDA++M
Subjt: LIHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKM
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7TV55 Putative Polyprotein | 1.3e-51 | 90.68 | Show/hide |
Query: LFTLTKNNVFVGKGYATNGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTEPLEL
LFTLTKNNV+VGKGYAT+GMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLI KLSLHDFEKCACC+QAK T+TSHK VT VT PLEL
Subjt: LFTLTKNNVFVGKGYATNGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTEPLEL
Query: IHSDLYEFDETLTRNSKR
IHSDL EFD TLTRNSKR
Subjt: IHSDLYEFDETLTRNSKR
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| A0A5D3DCJ1 Putative Polyprotein | 4.2e-103 | 88.84 | Show/hide |
Query: LFTLTKNNVFVGKGYATNGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTEPLEL
LFTLTKNNVFVGKGYAT+GMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLI KLSLHDFEKCACC+QAK TKTSHKFVTRVT+PLEL
Subjt: LFTLTKNNVFVGKGYATNGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTEPLEL
Query: IHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNG
IHSDL EFD TLTRNSKRYV+TF+DD S+YTFIYLLKNKSDAY+MFKVFVTEIENQFN+ IKRLRSDRGTEYD VAFNEFYNS GIIHE TPYSPEMNG
Subjt: IHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNG
Query: KAERNNITLTELVLS
K ER N TLTEL ++
Subjt: KAERNNITLTELVLS
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| A0A7N2L531 Uncharacterized protein | 2.5e-63 | 62.26 | Show/hide |
Query: FTLTKNNVFVGKGYATNGMFKLNLEINKIA-SSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTEPLEL
+ +TK +FVGKGYA +GMFKLN+E NK + SS YML+S N WHARLCH+N R + MS L LI +LS DFEKC C+QAK TK HK V R TE LEL
Subjt: FTLTKNNVFVGKGYATNGMFKLNLEINKIA-SSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTEPLEL
Query: IHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNG
IHSDL EF+ LTR RY+ITF+DD S YT IYLLKNKSDA++ F+ F+ E+ENQF IKR+RSDRG EY+ AFN F S GIIHE PYSP NG
Subjt: IHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNG
Query: KAERNNITLTEL
AER N TL EL
Subjt: KAERNNITLTEL
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| A0A7N2R9F3 Uncharacterized protein | 4.3e-63 | 61.79 | Show/hide |
Query: FTLTKNNVFVGKGYATNGMFKLNLEINKIA-SSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTEPLEL
+ +TK +FVGKGYA +GMFKLN+E NK + SS YML+S N WHARLCH+N R + MS L LI +LS DFEKC C+QAK TK HK V R TE LEL
Subjt: FTLTKNNVFVGKGYATNGMFKLNLEINKIA-SSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTEPLEL
Query: IHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNG
IHSDL EF+ LTR RY+ITF+DD S YT IYLLKNKSDA++ F+ F+ E+ENQF IKR+RSDRG EY+ AFN F S GIIHE PYSP NG
Subjt: IHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNG
Query: KAERNNITLTEL
ER N TL EL
Subjt: KAERNNITLTEL
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| Q0KIN7 Polyprotein, putative | 2.4e-58 | 55.09 | Show/hide |
Query: SNTYLFTLTKNNVFVGKGYATNGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTE
SN Y+ + K +FVGKGYA +GMFKLN+E+NK ++S YML+S N WHARLCH+N R + MS L LI + +FEKC C++AK TK H V R T+
Subjt: SNTYLFTLTKNNVFVGKGYATNGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVTRVTE
Query: PLELIHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSP
LEL+H+D+ E LTR RY ITF+DD S +T++YL+KNKSDA++ FK ++ E+ENQF IKR+RSDRG EY+ FN F S GIIHE PYSP
Subjt: PLELIHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSP
Query: EMNGKAERNNITLTEL
NG AER N TL EL
Subjt: EMNGKAERNNITLTEL
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.2e-19 | 30.73 | Show/hide |
Query: TLTKNNVFVGKGYA-TNGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHD-----FEKCACCNQAKRTKTSHKFV---TR
T++KN + V K N + +N + I +A +F +WH R H++ + + R N+ S SL + E C C K+ + K + T
Subjt: TLTKNNVFVGKGYA-TNGMFKLNLEINKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHD-----FEKCACCNQAKRTKTSHKFV---TR
Query: VTEPLELIHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITP
+ PL ++HSD+ +T + K Y + FVD ++Y YL+K KSD + MF+ FV + E FN + L D G EY +F GI + + P
Subjt: VTEPLELIHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITP
Query: YSPEMNGKAERNNITLTE
++P++NG +ER T+TE
Subjt: YSPEMNGKAERNNITLTE
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-24 | 32.24 | Show/hide |
Query: LTKNNVFVGKGYATNGMFKLNLEI-NKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVT-RVTEPLELI
LTK ++ + KG A +++ N EI ++A S ++WH R+ H++++ + +++ +LIS + C C K+ + S + + R L+L+
Subjt: LTKNNVFVGKGYATNGMFKLNLEI-NKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLISKLSLHDFEKCACCNQAKRTKTSHKFVT-RVTEPLELI
Query: HSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNGK
+SD+ E + +Y +TF+DD+S ++Y+LK K +++F+ F +E + +KRLRSD G EY F E+ +S+GI HE P +P+ NG
Subjt: HSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNGK
Query: AERNNITLTELVLS
AER N T+ E V S
Subjt: AERNNITLTELVLS
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 1.6e-11 | 27.78 | Show/hide |
Query: HARLCHVNKRLISNMSRLNLISKLSLHDFE-------KCACCNQAKRTKTSHKFVTRVT-----EPLELIHSDLYEFDETLTRNSKRYVITFVDDSSNYT
H L H N R I + N ++ L D E +C C K TK H +R+ EP + +H+D++ L +++ Y I+F D+ + +
Subjt: HARLCHVNKRLISNMSRLNLISKLSLHDFE-------KCACCNQAKRTKTSHKFVTRVT-----EPLELIHSDLYEFDETLTRNSKRYVITFVDDSSNYT
Query: FIYLL--KNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNGKAERNNITL
++Y L + + +F + I+NQFN + ++ DRG+EY ++F+ + GI T +G AER N TL
Subjt: FIYLL--KNKSDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNGKAERNNITL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.6e-17 | 33.52 | Show/hide |
Query: WHARLCHVNKRLISNMSRLNLISKLS-LHDFEKCACC--NQAKRTKTSHKFVTRVTEPLELIHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNK
WHARL H +++++ +S L+ H F C+ C N++ + S + T PLE I+SD++ L+ ++ RY + FVD + YT++Y LK K
Subjt: WHARLCHVNKRLISNMSRLNLISKLS-LHDFEKCACC--NQAKRTKTSHKFVTRVTEPLELIHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNK
Query: SDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNGKAERNNITLTELVLS
S + F F +EN+F I SD G E+ VA E+++ +GI H P++PE NG +ER + + E L+
Subjt: SDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNGKAERNNITLTELVLS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.9e-16 | 31.25 | Show/hide |
Query: WHARLCHVNKRLISNMSRLNLISKLS-LHDFEKCACC--NQAKRTKTSHKFVTRVTEPLELIHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNK
WH+RL H + +++++ + + L+ H C+ C N++ + S+ +T ++PLE I+SD++ L+ ++ RY + FVD + YT++Y LK K
Subjt: WHARLCHVNKRLISNMSRLNLISKLS-LHDFEKCACC--NQAKRTKTSHKFVTRVTEPLELIHSDLYEFDETLTRNSKRYVITFVDDSSNYTFIYLLKNK
Query: SDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNGKAERNNITLTELVLS
S F +F + +EN+F I L SD G E+ V ++ + +GI H P++PE NG +ER + + E+ L+
Subjt: SDAYKMFKVFVTEIENQFNEIIKRLRSDRGTEYDLVAFNEFYNSNGIIHEIITPYSPEMNGKAERNNITLTELVLS
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