| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025917.1 pol protein [Cucumis melo var. makuwa] | 1.2e-109 | 96.14 | Show/hide |
Query: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILA+VVD+AEPEV LSSEPVVREYPDVFPDELPG
Subjt: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
Query: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
Subjt: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
Query: GPPSFPR
G F +
Subjt: GPPSFPR
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| KAA0025998.1 pol protein [Cucumis melo var. makuwa] | 5.2e-105 | 93.24 | Show/hide |
Query: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
MQDFDVILGMDWLS NHA IDCF KEVVFNPPSG FKFRGAGMV IPKVISAMKASKLLSQGTWGILASVVDV EPEV LSSEPVVREYPDVFPDELPG
Subjt: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
Query: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQ
Subjt: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
Query: GPPSFPR
G F +
Subjt: GPPSFPR
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| KAA0059723.1 pol protein [Cucumis melo var. makuwa] | 6.8e-105 | 92.75 | Show/hide |
Query: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
MQDFDVILGMDWLS NHA IDCF KEVVFNPPSG FKFRGAGMV IPKVISAMKASKLLSQGTWGILASVVD+ EPEV LSSEPVVREYPDVFPDELPG
Subjt: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
Query: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQ
Subjt: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
Query: GPPSFPR
G F +
Subjt: GPPSFPR
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| KAA0060745.1 pol protein [Cucumis melo var. makuwa] | 1.5e-104 | 92.27 | Show/hide |
Query: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
MQDFDVILGMDWLS NHA IDCF KEVVFNPPSG FKFRGAGMV IPKVISAMKASKLLSQGTWGILASVVD+ EPEV LSSEPVVREYPDVFPDELPG
Subjt: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
Query: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP+I+DLFDQLQ
Subjt: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
Query: GPPSFPR
G F +
Subjt: GPPSFPR
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| TYK01306.1 pol protein [Cucumis melo var. makuwa] | 6.8e-105 | 92.75 | Show/hide |
Query: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
MQDFDVILGMDWLS NHA IDCF KEVVFNPPSG FKFRGAGMV IPKVISAMKASKLLSQGTWGILASVVD+ EPEV LSSEPVVREYPDVFPDELPG
Subjt: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
Query: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQ
Subjt: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
Query: GPPSFPR
G F +
Subjt: GPPSFPR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SIJ5 Reverse transcriptase | 2.5e-105 | 93.24 | Show/hide |
Query: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
MQDFDVILGMDWLS NHA IDCF KEVVFNPPSG FKFRGAGMV IPKVISAMKASKLLSQGTWGILASVVDV EPEV LSSEPVVREYPDVFPDELPG
Subjt: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
Query: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQ
Subjt: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
Query: GPPSFPR
G F +
Subjt: GPPSFPR
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| A0A5A7TP01 Reverse transcriptase | 5.8e-110 | 96.14 | Show/hide |
Query: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILA+VVD+AEPEV LSSEPVVREYPDVFPDELPG
Subjt: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
Query: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
Subjt: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
Query: GPPSFPR
G F +
Subjt: GPPSFPR
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| A0A5A7UUX8 Reverse transcriptase | 3.3e-105 | 92.75 | Show/hide |
Query: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
MQDFDVILGMDWLS NHA IDCF KEVVFNPPSG FKFRGAGMV IPKVISAMKASKLLSQGTWGILASVVD+ EPEV LSSEPVVREYPDVFPDELPG
Subjt: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
Query: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQ
Subjt: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
Query: GPPSFPR
G F +
Subjt: GPPSFPR
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| A0A5A7V4E4 Reverse transcriptase | 7.4e-105 | 92.27 | Show/hide |
Query: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
MQDFDVILGMDWLS NHA IDCF KEVVFNPPSG FKFRGAGMV IPKVISAMKASKLLSQGTWGILASVVD+ EPEV LSSEPVVREYPDVFPDELPG
Subjt: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
Query: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP+I+DLFDQLQ
Subjt: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
Query: GPPSFPR
G F +
Subjt: GPPSFPR
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| A0A5D3BSV9 Reverse transcriptase | 3.3e-105 | 92.75 | Show/hide |
Query: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
MQDFDVILGMDWLS NHA IDCF KEVVFNPPSG FKFRGAGMV IPKVISAMKASKLLSQGTWGILASVVD+ EPEV LSSEPVVREYPDVFPDELPG
Subjt: MQDFDVILGMDWLSTNHATIDCFNKEVVFNPPSGDKFKFRGAGMVGIPKVISAMKASKLLSQGTWGILASVVDVAEPEVFLSSEPVVREYPDVFPDELPG
Query: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQ
Subjt: LPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQ
Query: GPPSFPR
G F +
Subjt: GPPSFPR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CT41 Transposon Tf2-12 polyprotein | 3.2e-12 | 31.62 | Show/hide |
Query: VAEPEVFLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL
V EPE+ + +E+ D+ + LP P + ++F +EL + Y + P +++ + ++ + L G IR S + PV+FV KK+G++R+
Subjt: VAEPEVFLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL
Query: CIDYRELNKVTVKNRYPLPRIEDLFDQLQGPPSFPR
+DY+ LNK N YPLP IE L ++QG F +
Subjt: CIDYRELNKVTVKNRYPLPRIEDLFDQLQGPPSFPR
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| P10394 Retrovirus-related Pol polyprotein from transposon 412 | 6.4e-13 | 31.82 | Show/hide |
Query: REYPDVFPDELPGLPPPREVDFAIELEPGTA--------------PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG------
+ +P++F +L + FA+E EP T P+ YR ++++E++ Q+Q+L+ + PSVS + +P+L V KK
Subjt: REYPDVFPDELPGLPPPREVDFAIELEPGTA--------------PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG------
Query: SMRLCIDYRELNKVTVKNRYPLPRIEDLFDQL
RL IDYR++NK + +++PLPRI+D+ DQL
Subjt: SMRLCIDYRELNKVTVKNRYPLPRIEDLFDQL
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 3.3e-17 | 33.33 | Show/hide |
Query: KASKLLSQGTWGILASVVDVAEPEVFLSSEP---------VVREYPDVFPDELPGLPPPREVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQ
+AS L G + + S + EP S + ++Y ++ ++LP P P +++ IE++PG PY + +E+ +Q
Subjt: KASKLLSQGTWGILASVVDVAEPEVFLSSEP---------VVREYPDVFPDELPGLPPPREVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQ
Query: ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQL
+LLD FI PS SP +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRI++L ++
Subjt: ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 3.3e-17 | 33.33 | Show/hide |
Query: KASKLLSQGTWGILASVVDVAEPEVFLSSEP---------VVREYPDVFPDELPGLPPPREVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQ
+AS L G + + S + EP S + ++Y ++ ++LP P P +++ IE++PG PY + +E+ +Q
Subjt: KASKLLSQGTWGILASVVDVAEPEVFLSSEP---------VVREYPDVFPDELPGLPPPREVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQ
Query: ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQL
+LLD FI PS SP +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRI++L ++
Subjt: ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIEDLFDQL
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| Q9UR07 Transposon Tf2-11 polyprotein | 3.2e-12 | 31.62 | Show/hide |
Query: VAEPEVFLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL
V EPE+ + +E+ D+ + LP P + ++F +EL + Y + P +++ + ++ + L G IR S + PV+FV KK+G++R+
Subjt: VAEPEVFLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRL
Query: CIDYRELNKVTVKNRYPLPRIEDLFDQLQGPPSFPR
+DY+ LNK N YPLP IE L ++QG F +
Subjt: CIDYRELNKVTVKNRYPLPRIEDLFDQLQGPPSFPR
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