; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0067511 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0067511
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr03:10427387..10428052
RNA-Seq ExpressionCmc03g0067511
SyntenyCmc03g0067511
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR041373 - Reverse transcriptase, RNase H-like domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032952.1 reverse transcriptase [Cucumis melo var. makuwa]2.6e-12096.83Show/hide
Query:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ
        MMEGPLLGIADVTKPFEVETD SDYALGGVLLQNGHPIAY+SRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQ KLTLKQ
Subjt:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ

Query:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV
        ARWQEFLAEFDFEFEHKKGSSNQA DALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAA NVMNLVKA KTRQFWVEEDLLVTKGNRLYVPRV
Subjt:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV

Query:  GDLRKKLLYECHDILWAGHPG
        GDLRKKLLYECHD LWAGHPG
Subjt:  GDLRKKLLYECHDILWAGHPG

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]3.2e-11895.02Show/hide
Query:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ
        +MEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDN+ATCHFFTQ KLT KQ
Subjt:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ

Query:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV
        ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEH AICLLAHL+GSEIGGSVRDTLREFLQKDHAA NVMNL KAGKTRQFWVEEDLLVTKGNRLYVPR 
Subjt:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV

Query:  GDLRKKLLYECHDILWAGHPG
        G LRKKLLYECHD LWAGHPG
Subjt:  GDLRKKLLYECHDILWAGHPG

KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]3.2e-11895.02Show/hide
Query:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ
        +MEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDN+ATCHFFTQ KLT KQ
Subjt:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ

Query:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV
        ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEH AICLLAHL+GSEIGGSVRDTLREFLQKDHAA NVMNL KAGKTRQFWVEEDLLVTKGNRLYVPR 
Subjt:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV

Query:  GDLRKKLLYECHDILWAGHPG
        G LRKKLLYECHD LWAGHPG
Subjt:  GDLRKKLLYECHDILWAGHPG

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]3.2e-11895.02Show/hide
Query:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ
        +MEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDN+ATCHFFTQ KLT KQ
Subjt:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ

Query:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV
        ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEH AICLLAHL+GSEIGGSVRDTLREFLQKDHAA NVMNL KAGKTRQFWVEEDLLVTKGNRLYVPR 
Subjt:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV

Query:  GDLRKKLLYECHDILWAGHPG
        G LRKKLLYECHD LWAGHPG
Subjt:  GDLRKKLLYECHDILWAGHPG

TYK01597.1 reverse transcriptase [Cucumis melo var. makuwa]1.9e-11895.02Show/hide
Query:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ
        MMEGPLLGIADVTKPFEVETDAS+YALGGVLLQNGHPI YESRKLN AERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDN+ATCHFFTQ KLT KQ
Subjt:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ

Query:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV
        ARWQEFLAEFDFEFEHKKGS+NQAADALSRKQEH AICLLAHLRGSEIGGSVRDTLREFLQKDHAA NVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPR 
Subjt:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV

Query:  GDLRKKLLYECHDILWAGHPG
        GDLRKKLLYECHD LWAGHPG
Subjt:  GDLRKKLLYECHDILWAGHPG

TrEMBL top hitse value%identityAlignment
A0A5A7SP58 Reverse transcriptase1.3e-12096.83Show/hide
Query:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ
        MMEGPLLGIADVTKPFEVETD SDYALGGVLLQNGHPIAY+SRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQ KLTLKQ
Subjt:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ

Query:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV
        ARWQEFLAEFDFEFEHKKGSSNQA DALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAA NVMNLVKA KTRQFWVEEDLLVTKGNRLYVPRV
Subjt:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV

Query:  GDLRKKLLYECHDILWAGHPG
        GDLRKKLLYECHD LWAGHPG
Subjt:  GDLRKKLLYECHDILWAGHPG

A0A5A7UXR6 Reverse transcriptase1.6e-11895.02Show/hide
Query:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ
        +MEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDN+ATCHFFTQ KLT KQ
Subjt:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ

Query:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV
        ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEH AICLLAHL+GSEIGGSVRDTLREFLQKDHAA NVMNL KAGKTRQFWVEEDLLVTKGNRLYVPR 
Subjt:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV

Query:  GDLRKKLLYECHDILWAGHPG
        G LRKKLLYECHD LWAGHPG
Subjt:  GDLRKKLLYECHDILWAGHPG

A0A5D3BQE4 Reverse transcriptase9.2e-11995.02Show/hide
Query:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ
        MMEGPLLGIADVTKPFEVETDAS+YALGGVLLQNGHPI YESRKLN AERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDN+ATCHFFTQ KLT KQ
Subjt:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ

Query:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV
        ARWQEFLAEFDFEFEHKKGS+NQAADALSRKQEH AICLLAHLRGSEIGGSVRDTLREFLQKDHAA NVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPR 
Subjt:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV

Query:  GDLRKKLLYECHDILWAGHPG
        GDLRKKLLYECHD LWAGHPG
Subjt:  GDLRKKLLYECHDILWAGHPG

A0A5D3BRZ6 Reverse transcriptase1.6e-11895.02Show/hide
Query:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ
        +MEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDN+ATCHFFTQ KLT KQ
Subjt:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ

Query:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV
        ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEH AICLLAHL+GSEIGGSVRDTLREFLQKDHAA NVMNL KAGKTRQFWVEEDLLVTKGNRLYVPR 
Subjt:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV

Query:  GDLRKKLLYECHDILWAGHPG
        G LRKKLLYECHD LWAGHPG
Subjt:  GDLRKKLLYECHDILWAGHPG

A0A5D3C4R1 Reverse transcriptase1.6e-11895.02Show/hide
Query:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ
        +MEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDN+ATCHFFTQ KLT KQ
Subjt:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ

Query:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV
        ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEH AICLLAHL+GSEIGGSVRDTLREFLQKDHAA NVMNL KAGKTRQFWVEEDLLVTKGNRLYVPR 
Subjt:  ARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRV

Query:  GDLRKKLLYECHDILWAGHPG
        G LRKKLLYECHD LWAGHPG
Subjt:  GDLRKKLLYECHDILWAGHPG

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.69.7e-2545.52Show/hide
Query:  EGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQAR
        E P+L + D TK F + TDASD ALG VL Q+GHP++Y SR LN  E  Y+  EKE+LA+V   + +R YLLG  F + +D+      +  +    K  R
Subjt:  EGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQAR

Query:  WQEFLAEFDFEFEHKKGSSNQAADALSR-KQEHT
        W+  L+EFDF+ ++ KG  N  ADALSR K E T
Subjt:  WQEFLAEFDFEFEHKKGSSNQAADALSR-KQEHT

P0CT34 Transposon Tf2-1 polyprotein2.5e-2028.69Show/hide
Query:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNG-----HPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS--SFVVKTDNNATCHFFTQ
        ++  P+L   D +K   +ETDASD A+G VL Q       +P+ Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+       T 
Subjt:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNG-----HPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS--SFVVKTDNNATCHFFTQ

Query:  QK--LTLKQARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAIC-------LLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVE
        +      + ARWQ FL +F+FE  ++ GS+N  ADALSR  + T           +  +    I    ++ +      D    N++N           ++
Subjt:  QK--LTLKQARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAIC-------LLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVE

Query:  EDLLVTKGNRLYVPRVGDLRKKLLYECHDILWAGHPG
        + LL+   +++ +P    L + ++ + H+     HPG
Subjt:  EDLLVTKGNRLYVPRVGDLRKKLLYECHDILWAGHPG

P0CT41 Transposon Tf2-12 polyprotein2.5e-2028.69Show/hide
Query:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNG-----HPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS--SFVVKTDNNATCHFFTQ
        ++  P+L   D +K   +ETDASD A+G VL Q       +P+ Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+       T 
Subjt:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNG-----HPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS--SFVVKTDNNATCHFFTQ

Query:  QK--LTLKQARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAIC-------LLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVE
        +      + ARWQ FL +F+FE  ++ GS+N  ADALSR  + T           +  +    I    ++ +      D    N++N           ++
Subjt:  QK--LTLKQARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAIC-------LLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVE

Query:  EDLLVTKGNRLYVPRVGDLRKKLLYECHDILWAGHPG
        + LL+   +++ +P    L + ++ + H+     HPG
Subjt:  EDLLVTKGNRLYVPRVGDLRKKLLYECHDILWAGHPG

P20825 Retrovirus-related Pol polyprotein from transposon 2974.5e-2241.54Show/hide
Query:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ
        ++  P+L + D  K F + TDAS+ ALG VL QNGHPI++ SR LN  E  Y+  EKE+LA+V   + +R YLLG  F++ +D+         ++   K 
Subjt:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQ

Query:  ARWQEFLAEFDFEFEHKKGSSNQAADALSR
         RW+  L+E+ F+ ++ KG  N  ADALSR
Subjt:  ARWQEFLAEFDFEFEHKKGSSNQAADALSR

Q9UR07 Transposon Tf2-11 polyprotein2.5e-2028.69Show/hide
Query:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNG-----HPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS--SFVVKTDNNATCHFFTQ
        ++  P+L   D +K   +ETDASD A+G VL Q       +P+ Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+       T 
Subjt:  MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNG-----HPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGS--SFVVKTDNNATCHFFTQ

Query:  QK--LTLKQARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAIC-------LLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVE
        +      + ARWQ FL +F+FE  ++ GS+N  ADALSR  + T           +  +    I    ++ +      D    N++N           ++
Subjt:  QK--LTLKQARWQEFLAEFDFEFEHKKGSSNQAADALSRKQEHTAIC-------LLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVE

Query:  EDLLVTKGNRLYVPRVGDLRKKLLYECHDILWAGHPG
        + LL+   +++ +P    L + ++ + H+     HPG
Subjt:  EDLLVTKGNRLYVPRVGDLRKKLLYECHDILWAGHPG

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGGGGCCACTTCTAGGGATTGCGGATGTGACCAAACCTTTCGAAGTCGAGACAGATGCGTCTGATTATGCGTTGGGGGGTGTGCTCCTGCAGAATGGGCACCC
GATCGCATACGAAAGTCGTAAGTTGAATGCAGCTGAAAGGAGGTATACTGTGTCCGAAAAAGAAATGCTCGCAGTAGTACATTGTTTGAGGGCCTGGAGACAATACCTAT
TAGGTTCGTCGTTTGTAGTGAAGACGGACAACAATGCAACCTGCCACTTCTTTACCCAGCAAAAGTTGACTTTGAAGCAAGCAAGATGGCAGGAATTTCTGGCCGAGTTC
GACTTCGAATTTGAACACAAGAAGGGGTCGAGCAATCAGGCTGCTGATGCCCTAAGTCGAAAACAAGAACATACAGCCATATGCTTATTAGCTCACCTCCGGGGGAGCGA
GATTGGTGGGTCGGTTAGAGACACTTTGAGAGAGTTCCTACAGAAAGATCATGCCGCTCATAATGTCATGAATTTAGTGAAGGCGGGCAAAACACGACAATTTTGGGTCG
AGGAAGACTTGTTAGTCACAAAGGGCAATCGGCTATATGTTCCTAGAGTAGGGGACTTAAGGAAGAAATTGTTGTATGAGTGTCACGACATTCTATGGGCTGGCCATCCC
GGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGAGGGGCCACTTCTAGGGATTGCGGATGTGACCAAACCTTTCGAAGTCGAGACAGATGCGTCTGATTATGCGTTGGGGGGTGTGCTCCTGCAGAATGGGCACCC
GATCGCATACGAAAGTCGTAAGTTGAATGCAGCTGAAAGGAGGTATACTGTGTCCGAAAAAGAAATGCTCGCAGTAGTACATTGTTTGAGGGCCTGGAGACAATACCTAT
TAGGTTCGTCGTTTGTAGTGAAGACGGACAACAATGCAACCTGCCACTTCTTTACCCAGCAAAAGTTGACTTTGAAGCAAGCAAGATGGCAGGAATTTCTGGCCGAGTTC
GACTTCGAATTTGAACACAAGAAGGGGTCGAGCAATCAGGCTGCTGATGCCCTAAGTCGAAAACAAGAACATACAGCCATATGCTTATTAGCTCACCTCCGGGGGAGCGA
GATTGGTGGGTCGGTTAGAGACACTTTGAGAGAGTTCCTACAGAAAGATCATGCCGCTCATAATGTCATGAATTTAGTGAAGGCGGGCAAAACACGACAATTTTGGGTCG
AGGAAGACTTGTTAGTCACAAAGGGCAATCGGCTATATGTTCCTAGAGTAGGGGACTTAAGGAAGAAATTGTTGTATGAGTGTCACGACATTCTATGGGCTGGCCATCCC
GGATGA
Protein sequenceShow/hide protein sequence
MMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEMLAVVHCLRAWRQYLLGSSFVVKTDNNATCHFFTQQKLTLKQARWQEFLAEF
DFEFEHKKGSSNQAADALSRKQEHTAICLLAHLRGSEIGGSVRDTLREFLQKDHAAHNVMNLVKAGKTRQFWVEEDLLVTKGNRLYVPRVGDLRKKLLYECHDILWAGHP
G