; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0067521 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0067521
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr03:10428098..10428877
RNA-Seq ExpressionCmc03g0067521
SyntenyCmc03g0067521
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057282.1 reverse transcriptase [Cucumis melo var. makuwa]8.7e-13994.98Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEKVKVA LLDPL VPTRPW+SVSMDFIT+LPKVGDFEAILVIID FSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT

Query:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV
        SIVSDRDGRFI SFWT+LFSFL TSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFN QTSSS GR+PFEIVSGRQPVLP LV
Subjt:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV

Query:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
        DHPF GKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
Subjt:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]7.3e-13894.59Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEKVKVA LLDPL VPTRPW+SVSMDFIT+LPKVGDFEAILVIID FSKYATFIP TKQCSAE TAQLFFKHVVKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT

Query:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV
        SIVSDRDGRFI SFWTELFSFLGTSLNISSSYHPQTDGQTERFN MLEEYLRHFVNARQKNWVQLLDVAQFCFN QTSSS GR+PFEIVSGRQPVLP LV
Subjt:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV

Query:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
        DHPFAGKNPQALNFTKEW+QTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
Subjt:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL

KAA0067594.1 reverse transcriptase [Cucumis melo var. makuwa]1.6e-14096.14Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEKVKVA LLDPL VPTRPW+SVSMDFIT+LPKVGDFEAILVIID FSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT

Query:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV
        SIVSDRDGRFI SFWTELFSFLGTSLNISSSYHPQT+GQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFN QTSSSIGR+PFEIVSGRQPVLP LV
Subjt:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV

Query:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
        DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
Subjt:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL

TYK01597.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-14096.14Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEKVKVA LLDPL VPTRPW+SVSMDFIT+LPKVGDFEAILVIID FSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT

Query:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV
        SIVSDRDGRFI SFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFN QTSSS GR+PFEIVSGRQPVLP LV
Subjt:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV

Query:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
        DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
Subjt:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL

TYK08407.1 reverse transcriptase [Cucumis melo var. makuwa]3.3e-13894.98Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEKVKVA LLDPL VPTRPW+SVSMDFIT+LPKVGDFEAILVIID FSKYATFIP TKQCSAE TAQLFFKHVVKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT

Query:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV
        SIVSDRDGRFI SFWTELFSFLGTSLNISSSYHPQTDGQTERFN MLEEYLRHFVNARQKNWVQLLDVAQFCFN QTSSS GR+PFEIVSGRQPVLP LV
Subjt:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV

Query:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
        DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
Subjt:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL

TrEMBL top hitse value%identityAlignment
A0A5A7UN48 Reverse transcriptase4.2e-13994.98Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEKVKVA LLDPL VPTRPW+SVSMDFIT+LPKVGDFEAILVIID FSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT

Query:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV
        SIVSDRDGRFI SFWT+LFSFL TSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFN QTSSS GR+PFEIVSGRQPVLP LV
Subjt:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV

Query:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
        DHPF GKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
Subjt:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL

A0A5A7VJQ9 Reverse transcriptase7.6e-14196.14Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEKVKVA LLDPL VPTRPW+SVSMDFIT+LPKVGDFEAILVIID FSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT

Query:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV
        SIVSDRDGRFI SFWTELFSFLGTSLNISSSYHPQT+GQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFN QTSSSIGR+PFEIVSGRQPVLP LV
Subjt:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV

Query:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
        DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
Subjt:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL

A0A5D3BQE4 Reverse transcriptase5.9e-14196.14Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEKVKVA LLDPL VPTRPW+SVSMDFIT+LPKVGDFEAILVIID FSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT

Query:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV
        SIVSDRDGRFI SFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFN QTSSS GR+PFEIVSGRQPVLP LV
Subjt:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV

Query:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
        DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
Subjt:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL

A0A5D3C4R1 Reverse transcriptase3.6e-13894.59Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEKVKVA LLDPL VPTRPW+SVSMDFIT+LPKVGDFEAILVIID FSKYATFIP TKQCSAE TAQLFFKHVVKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT

Query:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV
        SIVSDRDGRFI SFWTELFSFLGTSLNISSSYHPQTDGQTERFN MLEEYLRHFVNARQKNWVQLLDVAQFCFN QTSSS GR+PFEIVSGRQPVLP LV
Subjt:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV

Query:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
        DHPFAGKNPQALNFTKEW+QTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
Subjt:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL

A0A5D3C8W7 Reverse transcriptase1.6e-13894.98Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
        MRDDVMQYTKTCLICQQDKVEKVKVA LLDPL VPTRPW+SVSMDFIT+LPKVGDFEAILVIID FSKYATFIP TKQCSAE TAQLFFKHVVKLWGVPT
Subjt:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT

Query:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV
        SIVSDRDGRFI SFWTELFSFLGTSLNISSSYHPQTDGQTERFN MLEEYLRHFVNARQKNWVQLLDVAQFCFN QTSSS GR+PFEIVSGRQPVLP LV
Subjt:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV

Query:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
        DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL
Subjt:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein7.6e-3734.36Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
        +R  + +Y + C  CQ +K    K    L P+    RPW+S+SMDFIT LP+   + A+ V++D FSK A  +P TK  +AE TA++F + V+  +G P 
Subjt:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT

Query:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV
         I++D D  F S  W +        +  S  Y PQTDGQTER N  +E+ LR   +     WV  + + Q  +N    S+    PFEIV    P L  L 
Subjt:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV

Query:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPL-EFRAGDQVLIK
           F+ K  +    ++E  Q     + +L   + +MKK+ D K + + EF+ GD V++K
Subjt:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPL-EFRAGDQVLIK

P0CT35 Transposon Tf2-2 polyprotein7.6e-3734.36Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
        +R  + +Y + C  CQ +K    K    L P+    RPW+S+SMDFIT LP+   + A+ V++D FSK A  +P TK  +AE TA++F + V+  +G P 
Subjt:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT

Query:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV
         I++D D  F S  W +        +  S  Y PQTDGQTER N  +E+ LR   +     WV  + + Q  +N    S+    PFEIV    P L  L 
Subjt:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV

Query:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPL-EFRAGDQVLIK
           F+ K  +    ++E  Q     + +L   + +MKK+ D K + + EF+ GD V++K
Subjt:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPL-EFRAGDQVLIK

P0CT36 Transposon Tf2-3 polyprotein7.6e-3734.36Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
        +R  + +Y + C  CQ +K    K    L P+    RPW+S+SMDFIT LP+   + A+ V++D FSK A  +P TK  +AE TA++F + V+  +G P 
Subjt:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT

Query:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV
         I++D D  F S  W +        +  S  Y PQTDGQTER N  +E+ LR   +     WV  + + Q  +N    S+    PFEIV    P L  L 
Subjt:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV

Query:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPL-EFRAGDQVLIK
           F+ K  +    ++E  Q     + +L   + +MKK+ D K + + EF+ GD V++K
Subjt:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPL-EFRAGDQVLIK

P0CT41 Transposon Tf2-12 polyprotein7.6e-3734.36Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
        +R  + +Y + C  CQ +K    K    L P+    RPW+S+SMDFIT LP+   + A+ V++D FSK A  +P TK  +AE TA++F + V+  +G P 
Subjt:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT

Query:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV
         I++D D  F S  W +        +  S  Y PQTDGQTER N  +E+ LR   +     WV  + + Q  +N    S+    PFEIV    P L  L 
Subjt:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV

Query:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPL-EFRAGDQVLIK
           F+ K  +    ++E  Q     + +L   + +MKK+ D K + + EF+ GD V++K
Subjt:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPL-EFRAGDQVLIK

Q9UR07 Transposon Tf2-11 polyprotein7.6e-3734.36Show/hide
Query:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT
        +R  + +Y + C  CQ +K    K    L P+    RPW+S+SMDFIT LP+   + A+ V++D FSK A  +P TK  +AE TA++F + V+  +G P 
Subjt:  MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPT

Query:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV
         I++D D  F S  W +        +  S  Y PQTDGQTER N  +E+ LR   +     WV  + + Q  +N    S+    PFEIV    P L  L 
Subjt:  SIVSDRDGRFISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLV

Query:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPL-EFRAGDQVLIK
           F+ K  +    ++E  Q     + +L   + +MKK+ D K + + EF+ GD V++K
Subjt:  DHPFAGKNPQALNFTKEWKQTNDIARAYLEKASKRMKKWADKKRRPL-EFRAGDQVLIK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGATGATGTCATGCAGTACACTAAGACGTGTCTCATCTGCCAACAAGATAAAGTAGAGAAAGTGAAGGTTGCTCAACTTCTTGACCCTCTATCGGTTCCAACAAG
ACCTTGGAAGAGTGTCTCTATGGACTTTATCACCTATCTTCCTAAGGTAGGCGACTTTGAAGCCATCTTAGTCATCATTGATCTTTTTTCAAAGTACGCCACCTTCATCC
CCACCACCAAGCAGTGTTCAGCAGAAATGACAGCTCAATTGTTCTTTAAGCATGTTGTTAAGTTGTGGGGAGTCCCGACAAGTATAGTGAGTGACAGGGATGGTAGATTC
ATTAGCTCTTTCTGGACGGAGTTATTTTCCTTCTTGGGGACAAGTCTGAACATATCCTCAAGCTACCACCCCCAAACTGACGGCCAGACTGAGCGATTCAACTGCATGCT
CGAGGAATACTTGCGCCATTTTGTAAACGCAAGGCAAAAGAACTGGGTCCAGCTGTTGGACGTAGCCCAATTCTGTTTCAACGGTCAGACAAGTTCATCTATAGGGAGAA
ACCCGTTTGAGATTGTTTCTGGGAGGCAACCAGTACTGCCACAACTTGTTGATCATCCCTTTGCAGGGAAGAACCCTCAAGCCCTCAATTTCACGAAGGAGTGGAAACAG
ACAAACGACATCGCCCGAGCGTACTTAGAAAAAGCATCGAAGCGGATGAAGAAGTGGGCGGATAAGAAGCGACGACCTCTTGAGTTTCGGGCGGGAGACCAGGTACTCAT
CAAACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGATGATGTCATGCAGTACACTAAGACGTGTCTCATCTGCCAACAAGATAAAGTAGAGAAAGTGAAGGTTGCTCAACTTCTTGACCCTCTATCGGTTCCAACAAG
ACCTTGGAAGAGTGTCTCTATGGACTTTATCACCTATCTTCCTAAGGTAGGCGACTTTGAAGCCATCTTAGTCATCATTGATCTTTTTTCAAAGTACGCCACCTTCATCC
CCACCACCAAGCAGTGTTCAGCAGAAATGACAGCTCAATTGTTCTTTAAGCATGTTGTTAAGTTGTGGGGAGTCCCGACAAGTATAGTGAGTGACAGGGATGGTAGATTC
ATTAGCTCTTTCTGGACGGAGTTATTTTCCTTCTTGGGGACAAGTCTGAACATATCCTCAAGCTACCACCCCCAAACTGACGGCCAGACTGAGCGATTCAACTGCATGCT
CGAGGAATACTTGCGCCATTTTGTAAACGCAAGGCAAAAGAACTGGGTCCAGCTGTTGGACGTAGCCCAATTCTGTTTCAACGGTCAGACAAGTTCATCTATAGGGAGAA
ACCCGTTTGAGATTGTTTCTGGGAGGCAACCAGTACTGCCACAACTTGTTGATCATCCCTTTGCAGGGAAGAACCCTCAAGCCCTCAATTTCACGAAGGAGTGGAAACAG
ACAAACGACATCGCCCGAGCGTACTTAGAAAAAGCATCGAAGCGGATGAAGAAGTGGGCGGATAAGAAGCGACGACCTCTTGAGTTTCGGGCGGGAGACCAGGTACTCAT
CAAACTATGA
Protein sequenceShow/hide protein sequence
MRDDVMQYTKTCLICQQDKVEKVKVAQLLDPLSVPTRPWKSVSMDFITYLPKVGDFEAILVIIDLFSKYATFIPTTKQCSAEMTAQLFFKHVVKLWGVPTSIVSDRDGRF
ISSFWTELFSFLGTSLNISSSYHPQTDGQTERFNCMLEEYLRHFVNARQKNWVQLLDVAQFCFNGQTSSSIGRNPFEIVSGRQPVLPQLVDHPFAGKNPQALNFTKEWKQ
TNDIARAYLEKASKRMKKWADKKRRPLEFRAGDQVLIKL