| GenBank top hits | e value | %identity | Alignment |
|---|
| AAU90333.1 Putative gag and pol polyprotein, identical [Solanum demissum] | 3.9e-64 | 54.15 | Show/hide |
Query: DFEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQFNKRIKRLRSDRGT
+FEKC CS+ KITK H V R T EL+H+D+C L R R ITFIDD S +T++YL+KNKSDA+E F+ ++ E+ENQF ++IKR+RSDRG
Subjt: DFEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQFNKRIKRLRSDRGT
Query: EYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSKTSPYEVLKHKTPNLSYLRTWGCL
EY+S FN F S GIIHETT PYSP NG A+RKNRTL EL A+L+E A ++WGE I T YVLNR+P SK + +E+ K P+L YLR WGCL
Subjt: EYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSKTSPYEVLKHKTPNLSYLRTWGCL
Query: AYVRIPDPKRKKLASRAYEYVFIGYAENS
A+VR+ DPK KL + F+GYA NS
Subjt: AYVRIPDPKRKKLASRAYEYVFIGYAENS
|
|
| ABI34306.1 Polyprotein, putative [Solanum demissum] | 4.9e-67 | 54.13 | Show/hide |
Query: MSRLNLISKLSLHDFEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQF
MS L LI + +FEKC CS+ KITK H V R T+ EL+H+D+C L R RY ITFIDD S +T++YL+KNKSDA+E F+ ++ E+ENQF
Subjt: MSRLNLISKLSLHDFEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQF
Query: NKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSKTSPYEVLKHK
++IKR+RSDRG EY+S FN F S GIIHETT PYSP NG A+RKNRTL EL A+L+E A ++WGE I T YVLNR+P SK +P+E+ K
Subjt: NKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSKTSPYEVLKHK
Query: TPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENS
P+L YLR WGCLA+VR+ DPK KL + F+GYA NS
Subjt: TPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENS
|
|
| KAA0034938.1 putative Polyprotein [Cucumis melo var. makuwa] | 1.5e-121 | 89.3 | Show/hide |
Query: MSRLNLISKLSLHDFEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQF
MSRLNLI KLSLHDFEKCACCSQ KITKT HK V RVT+P ELIHSDLC FD TL RNSKRYV+TFIDDCS+YTFIYLLKNKSDAYEMF+VFV EIENQF
Subjt: MSRLNLISKLSLHDFEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQF
Query: NKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSKTSPYEVLKHK
NKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETT PYSPEMNGK +RKNRTLTEL VAILLE EAAPSWWGEIIKT+NYVLNRIPKSNSKTSPYEVLKHK
Subjt: NKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSKTSPYEVLKHK
Query: TPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENSK
PNLSYLRTWGCLAYVRIP+P+R+KLAS+AYE VFIGYAENSK
Subjt: TPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENSK
|
|
| KAG5527251.1 hypothetical protein RHGRI_028223 [Rhododendron griersonianum] | 3.4e-60 | 49.39 | Show/hide |
Query: MSRLNLISKLSLHD--FEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIEN
MSR LI + HD +KC C++ K+ K SV R +E +LIHSD+C + L R KRY TF+DD S YTF+YLL+ K + + F+ + E+EN
Subjt: MSRLNLISKLSLHD--FEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIEN
Query: QFNKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSKTSPYEVLK
Q NK+IK LRSDRG EY F++F GIIH+ TAPYSP+ NG A+RKNRTLTE+ +++ A WGE + T Y+ NRI + PYE+ K
Subjt: QFNKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSKTSPYEVLK
Query: HKTPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENSK
+ PNLSYL+ WGCLAY R+PDPKR KL RA + +F+GYAE+SK
Subjt: HKTPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENSK
|
|
| RZC09450.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja] | 4.4e-68 | 77.58 | Show/hide |
Query: LKNKSDAYEMFEVFVIEIENQFNKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTIN
+KNKS+A +MF++FV EIENQFNK+IK+LRSDRGT+YDS FNEFYN GIIHETTAPYSPEMNGKA+RKNRT TEL+VA +L A WWGEI+ T+
Subjt: LKNKSDAYEMFEVFVIEIENQFNKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTIN
Query: YVLNRIPKSNSKTSPYEVLKHKTPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENSK
YVLNRIPKS SKTSPYE+LK + PNLSYLRTWGCLAYVRIPDPKR KLASRAYE VFIGYA NSK
Subjt: YVLNRIPKSNSKTSPYEVLKHKTPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENSK
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A445KFK2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.1e-68 | 77.58 | Show/hide |
Query: LKNKSDAYEMFEVFVIEIENQFNKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTIN
+KNKS+A +MF++FV EIENQFNK+IK+LRSDRGT+YDS FNEFYN GIIHETTAPYSPEMNGKA+RKNRT TEL+VA +L A WWGEI+ T+
Subjt: LKNKSDAYEMFEVFVIEIENQFNKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTIN
Query: YVLNRIPKSNSKTSPYEVLKHKTPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENSK
YVLNRIPKS SKTSPYE+LK + PNLSYLRTWGCLAYVRIPDPKR KLASRAYE VFIGYA NSK
Subjt: YVLNRIPKSNSKTSPYEVLKHKTPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENSK
|
|
| A0A5D3DCJ1 Putative Polyprotein | 7.5e-122 | 89.3 | Show/hide |
Query: MSRLNLISKLSLHDFEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQF
MSRLNLI KLSLHDFEKCACCSQ KITKT HK V RVT+P ELIHSDLC FD TL RNSKRYV+TFIDDCS+YTFIYLLKNKSDAYEMF+VFV EIENQF
Subjt: MSRLNLISKLSLHDFEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQF
Query: NKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSKTSPYEVLKHK
NKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETT PYSPEMNGK +RKNRTLTEL VAILLE EAAPSWWGEIIKT+NYVLNRIPKSNSKTSPYEVLKHK
Subjt: NKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSKTSPYEVLKHK
Query: TPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENSK
PNLSYLRTWGCLAYVRIP+P+R+KLAS+AYE VFIGYAENSK
Subjt: TPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENSK
|
|
| A0A7N2L531 Uncharacterized protein | 9.9e-74 | 61.57 | Show/hide |
Query: MSRLNLISKLSLHDFEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQF
MS L LI +LS DFEKC CSQ KITK HK+V R TE ELIHSDLC F+ L R RY+ITFIDD S YT IYLLKNKSDA+E F+ F+ E+ENQF
Subjt: MSRLNLISKLSLHDFEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQF
Query: NKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSKTSPYEVLKHK
++IKR+RSDRG EY+S AFN F S GIIHETTAPYSP NG A+RKNRTL EL A+L+E A +WGE I T +VLNR+P S T+P+E+ K
Subjt: NKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSKTSPYEVLKHK
Query: TPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENS
PNL YLR W CLAYVR+ DPK KL RA F+GYA NS
Subjt: TPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENS
|
|
| A0A7N2R9F3 Uncharacterized protein | 2.6e-74 | 61.98 | Show/hide |
Query: MSRLNLISKLSLHDFEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQF
MS L LI +LS DFEKC CSQ KITK HKSV R TE ELIHSDLC F+ L R RY+ITFIDD S YT IYLLKNKSDA+E F+ F+ E+ENQF
Subjt: MSRLNLISKLSLHDFEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQF
Query: NKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSKTSPYEVLKHK
++IKR+RSDRG EY+S AFN F S GIIHETTAPYSP NG +RKNRTL EL A+L+E A +WGE I T +VLNR+P S T+P+E+ K
Subjt: NKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSKTSPYEVLKHK
Query: TPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENS
PNL YLR WGCLAYVR+ DPK KL RA F+GYA NS
Subjt: TPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENS
|
|
| Q0KIN7 Polyprotein, putative | 2.4e-67 | 54.13 | Show/hide |
Query: MSRLNLISKLSLHDFEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQF
MS L LI + +FEKC CS+ KITK H V R T+ EL+H+D+C L R RY ITFIDD S +T++YL+KNKSDA+E F+ ++ E+ENQF
Subjt: MSRLNLISKLSLHDFEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQF
Query: NKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSKTSPYEVLKHK
++IKR+RSDRG EY+S FN F S GIIHETT PYSP NG A+RKNRTL EL A+L+E A ++WGE I T YVLNR+P SK +P+E+ K
Subjt: NKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSKTSPYEVLKHK
Query: TPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENS
P+L YLR WGCLA+VR+ DPK KL + F+GYA NS
Subjt: TPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAENS
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.3e-33 | 33.05 | Show/hide |
Query: KLSLHDFEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQFNKRIKRLR
+LS E C Q ++ K + P ++HSD+C + + K Y + F+D ++Y YL+K KSD + MF+ FV + E FN ++ L
Subjt: KLSLHDFEKCACCSQVKITKTLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQFNKRIKRLR
Query: SDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKS---NSKTSPYEVLKHKTPNLS
D G EY S +F KGI + T P++P++NG ++R RT+TE ++ + S+WGE + T Y++NRIP +S +PYE+ +K P L
Subjt: SDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKS---NSKTSPYEVLKHKTPNLS
Query: YLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAEN
+LR +G YV I + K+ K ++++ +F+GY N
Subjt: YLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAEN
|
|
| P0C2I3 Transposon Ty1-DR6 Gag-Pol polyprotein | 1.1e-10 | 25.46 | Show/hide |
Query: KCACCSQVKITKTLHKSVNRVT-----EPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLL--KNKSDAYEMFEVFVIEIENQFNKRIKRLRS
+C C K TK H +R+ EPF+ +H+D+ + L ++ Y I+F D+ + + ++Y L + + ++F + I+NQF + ++
Subjt: KCACCSQVKITKTLHKSVNRVT-----EPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLL--KNKSDAYEMFEVFVIEIENQFNKRIKRLRS
Query: DRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSW-WGEIIKTINYVLNRIPKSNSKTSPYEVLKHKTPNLSYLR
DRG+EY + ++F GI T +G A+R NRTL + L+ P++ W I+ V N + SK S + ++S L
Subjt: DRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSW-WGEIIKTINYVLNRIPKSNSKTSPYEVLKHKTPNLSYLR
Query: TWGCLAYVRIPDPKRK
+G V +P K
Subjt: TWGCLAYVRIPDPKRK
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.6e-34 | 33.47 | Show/hide |
Query: LNLISKLSLHDFEK------CACCSQVKITK-TLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEI
L +++K SL + K C C K + + S R +L++SD+C +Y +TFIDD S ++Y+LK K +++F+ F +
Subjt: LNLISKLSLHDFEK------CACCSQVKITK-TLHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEI
Query: ENQFNKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPK-SNSKTSPYE
E + +++KRLRSD G EY S F E+ +S GI HE T P +P+ NG A+R NRT+ E + ++L + S+WGE ++T Y++NR P + P
Subjt: ENQFNKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPK-SNSKTSPYE
Query: VLKHKTPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAE
V +K + S+L+ +GC A+ +P +R KL ++ +FIGY +
Subjt: VLKHKTPNLSYLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYAE
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.7e-27 | 32.75 | Show/hide |
Query: HDFEKCACCSQVKITKT-LHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQFNKRIKRLRSDR
H F C+ C K K +S T P E I+SD+ L ++ RY + F+D + YT++Y LK KS E F F +EN+F RI SD
Subjt: HDFEKCACCSQVKITKT-LHKSVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQFNKRIKRLRSDR
Query: GTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSK-TSPYEVLKHKTPNLSYLRTW
G E+ VA E+++ GI H T+ P++PE NG ++RK+R + E + +L ++W Y++NR+P + SP++ L +PN LR +
Subjt: GTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSK-TSPYEVLKHKTPNLSYLRTW
Query: GCLAYVRIPDPKRKKLASRAYEYVFIGYA
GC Y + + KL ++ + VF+GY+
Subjt: GCLAYVRIPDPKRKKLASRAYEYVFIGYA
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.7e-26 | 32.05 | Show/hide |
Query: LHDFEKCACCSQVKITKTLHK-----SVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQFNKRIKR
L+ K CS I K+ HK S ++P E I+SD+ I N + YVI F+D + YT++Y LK KS + F +F +EN+F RI
Subjt: LHDFEKCACCSQVKITKTLHK-----SVNRVTEPFELIHSDLCVFDYTLIRNSKRYVITFIDDCSNYTFIYLLKNKSDAYEMFEVFVIEIENQFNKRIKR
Query: LRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSK-TSPYEVLKHKTPNLS
L SD G E+ V ++ + GI H T+ P++PE NG ++RK+R + E+ + +L ++W Y++NR+P + SP++ L + PN
Subjt: LRSDRGTEYDSVAFNEFYNSKGIIHETTAPYSPEMNGKAKRKNRTLTELIVAILLELEAAPSWWGEIIKTINYVLNRIPKSNSK-TSPYEVLKHKTPNLS
Query: YLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYA
L+ +GC Y + R KL ++ + F+GY+
Subjt: YLRTWGCLAYVRIPDPKRKKLASRAYEYVFIGYA
|
|
