| GenBank top hits | e value | %identity | Alignment |
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| KAA0045258.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 9.4e-105 | 89.38 | Show/hide |
Query: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
MENSAT GVIGKGKVILKLTSG+TLSLSNVLYVPSLRRNLVS SLLNRA LKIVLEGDK+VLTKNGDFVGKGYLSNGLFVLNTI +NANA S+ YVIES
Subjt: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
Query: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
NLWHGRLGHVNFASIRKLKDLRLINTSESHETGK ICVESKF+KK FK V+SRT DLLELIHSDLADFRTTTSR GKNYYVSFVDD+S+FTKIYLIKTK
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
Query: NEAGSIFLKFKAESENQLGKKIKRLR
+EAGS+FLKF AESENQLGKKIKRLR
Subjt: NEAGSIFLKFKAESENQLGKKIKRLR
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| KAA0068137.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.1e-104 | 89.82 | Show/hide |
Query: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
MENSAT GVIGKGKVILKLTSG+T SL NVLYVPSLRRNLVS SLLNRA LKIVLEGDK+VLTKN DFVGKGYLSNGLFVLNTI INANA S AYVIE A
Subjt: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
Query: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
NLWHGRLGHVNF SIRKLKDLRLINTSESHETGK ICVESKF+KK FKPVESRTTDLLELIHSDLA+FRTTTSRGGKNYYVSFVDD+S+F KIYLIKTK
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
Query: NEAGSIFLKFKAESENQLGKKIKRLR
NEAGS+FLKFKAESENQLGK IKRLR
Subjt: NEAGSIFLKFKAESENQLGKKIKRLR
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| TYK05597.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 3.6e-104 | 88.05 | Show/hide |
Query: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
M NSAT GVIGKGKVILKLTSG+TLSLSNVLYVPSLRRNLVS SLLNRA LKIVLEGDK+VLTKNGDFVGKGYLSNGLFVLNTI +NANA S AY+IESA
Subjt: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
Query: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
NLWHGRLGHVNFASIRKLKD+RLINTSE+HETGK SIC+ESKF+KK FKPVE RTT+LLELIHSDLADFRTT SRGGKNYYVSFVDD+S+FTKIYLI+TK
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
Query: NEAGSIFLKFKAESENQLGKKIKRLR
NEA S+F+KFKAESENQLGK+IKRLR
Subjt: NEAGSIFLKFKAESENQLGKKIKRLR
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| TYK11299.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.1e-104 | 88.05 | Show/hide |
Query: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
M NSAT GVIGKGKVILKLTSG+TLSLSNVLYVPSLRRNLVS SLLNRA LKIVLEGDK+VLTKNGDF+GKGYLSNGLFVLNTI +NANA S AY+IESA
Subjt: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
Query: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
NLWHGRLGHVNFASIRKLKD+RLINTSE+HETGK SIC+ESKF+KK FKPVE RTT+LLELIHSDLADFRTT SRGGKNYYVSFVDD+S+FTKIYLIKTK
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
Query: NEAGSIFLKFKAESENQLGKKIKRLR
NEA S+F+KFKAESENQLGK+IKRLR
Subjt: NEAGSIFLKFKAESENQLGKKIKRLR
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| TYK27931.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 3.6e-104 | 88.05 | Show/hide |
Query: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
M NSAT GVIGKGKVILKLTSG+TLSLSNVLYVPSLRRNLVS SLLNRA LKIVLEGDK+VLTKNGDFVGKGYLSNGLFVLNTI +NANA S AY+IESA
Subjt: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
Query: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
NLWHGRLGHVNFASIRKLKD+RLINTSE+HETGK SIC+ESKF+KK FKPVE RTT+LLELIHSDLADFRTT SRGGKNYYVSFVDD+S+FTKIYLI+TK
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
Query: NEAGSIFLKFKAESENQLGKKIKRLR
NEA S+F+KFKAESENQLGK+IKRLR
Subjt: NEAGSIFLKFKAESENQLGKKIKRLR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TQW7 Ty1-copia retrotransposon protein | 4.5e-105 | 89.38 | Show/hide |
Query: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
MENSAT GVIGKGKVILKLTSG+TLSLSNVLYVPSLRRNLVS SLLNRA LKIVLEGDK+VLTKNGDFVGKGYLSNGLFVLNTI +NANA S+ YVIES
Subjt: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
Query: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
NLWHGRLGHVNFASIRKLKDLRLINTSESHETGK ICVESKF+KK FK V+SRT DLLELIHSDLADFRTTTSR GKNYYVSFVDD+S+FTKIYLIKTK
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
Query: NEAGSIFLKFKAESENQLGKKIKRLR
+EAGS+FLKF AESENQLGKKIKRLR
Subjt: NEAGSIFLKFKAESENQLGKKIKRLR
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| A0A5A7VLL3 Ty1-copia retrotransposon protein | 1.0e-104 | 89.82 | Show/hide |
Query: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
MENSAT GVIGKGKVILKLTSG+T SL NVLYVPSLRRNLVS SLLNRA LKIVLEGDK+VLTKN DFVGKGYLSNGLFVLNTI INANA S AYVIE A
Subjt: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
Query: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
NLWHGRLGHVNF SIRKLKDLRLINTSESHETGK ICVESKF+KK FKPVESRTTDLLELIHSDLA+FRTTTSRGGKNYYVSFVDD+S+F KIYLIKTK
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
Query: NEAGSIFLKFKAESENQLGKKIKRLR
NEAGS+FLKFKAESENQLGK IKRLR
Subjt: NEAGSIFLKFKAESENQLGKKIKRLR
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| A0A5D3C1A6 Ty1-copia retrotransposon protein | 1.7e-104 | 88.05 | Show/hide |
Query: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
M NSAT GVIGKGKVILKLTSG+TLSLSNVLYVPSLRRNLVS SLLNRA LKIVLEGDK+VLTKNGDFVGKGYLSNGLFVLNTI +NANA S AY+IESA
Subjt: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
Query: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
NLWHGRLGHVNFASIRKLKD+RLINTSE+HETGK SIC+ESKF+KK FKPVE RTT+LLELIHSDLADFRTT SRGGKNYYVSFVDD+S+FTKIYLI+TK
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
Query: NEAGSIFLKFKAESENQLGKKIKRLR
NEA S+F+KFKAESENQLGK+IKRLR
Subjt: NEAGSIFLKFKAESENQLGKKIKRLR
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| A0A5D3CM58 Ty1-copia retrotransposon protein | 1.0e-104 | 88.05 | Show/hide |
Query: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
M NSAT GVIGKGKVILKLTSG+TLSLSNVLYVPSLRRNLVS SLLNRA LKIVLEGDK+VLTKNGDF+GKGYLSNGLFVLNTI +NANA S AY+IESA
Subjt: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
Query: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
NLWHGRLGHVNFASIRKLKD+RLINTSE+HETGK SIC+ESKF+KK FKPVE RTT+LLELIHSDLADFRTT SRGGKNYYVSFVDD+S+FTKIYLIKTK
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
Query: NEAGSIFLKFKAESENQLGKKIKRLR
NEA S+F+KFKAESENQLGK+IKRLR
Subjt: NEAGSIFLKFKAESENQLGKKIKRLR
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| A0A5D3DWC4 Ty1-copia retrotransposon protein | 1.7e-104 | 88.05 | Show/hide |
Query: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
M NSAT GVIGKGKVILKLTSG+TLSLSNVLYVPSLRRNLVS SLLNRA LKIVLEGDK+VLTKNGDFVGKGYLSNGLFVLNTI +NANA S AY+IESA
Subjt: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
Query: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
NLWHGRLGHVNFASIRKLKD+RLINTSE+HETGK SIC+ESKF+KK FKPVE RTT+LLELIHSDLADFRTT SRGGKNYYVSFVDD+S+FTKIYLI+TK
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
Query: NEAGSIFLKFKAESENQLGKKIKRLR
NEA S+F+KFKAESENQLGK+IKRLR
Subjt: NEAGSIFLKFKAESENQLGKKIKRLR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.3e-13 | 29.17 | Show/hide |
Query: ILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSF-AYVIESANLWHGRLGHVNFAS
I++L + ++L +VL+ NL+S L A + I + + ++KNG V K N + N IN A+S A + LWH R GH++
Subjt: ILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSF-AYVIESANLWHGRLGHVNFAS
Query: IRKLK------DLRLINTSESHETGKYSICVESKFYKKRFKPVESRT--TDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTKNEAGSI
+ ++K D L+N E C+ K + FK ++ +T L ++HSD+ T + KNY+V FVD + + YLIK K++ S+
Subjt: IRKLK------DLRLINTSESHETGKYSICVESKFYKKRFKPVESRT--TDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTKNEAGSI
Query: FLKFKAESENQLGKKI
F F A+SE K+
Subjt: FLKFKAESENQLGKKI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.8e-24 | 31.42 | Show/hide |
Query: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
M N++ + G G + +K G TL L +V +VP LR NL+S L+R + K LTK + KG L+ N I + A S
Subjt: MENSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANAFSFAYVIESA
Query: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
+LWH R+GH++ ++ L LI+ ++ C+ K ++ F+ R ++L+L++SD+ S GG Y+V+F+DD S+ +Y++KTK
Subjt: NLWHGRLGHVNFASIRKLKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLIKTK
Query: NEAGSIFLKFKAESENQLGKKIKRLR
++ +F KF A E + G+K+KRLR
Subjt: NEAGSIFLKFKAESENQLGKKIKRLR
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.0e-08 | 26.18 | Show/hide |
Query: NSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRA------------RLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANA
+ +T+ + G L T R L+L N+LYVP++ +NL+S L A ++K + G ++ K D + + +++ + + A+
Subjt: NSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLLNRA------------RLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINANA
Query: FSFAYVIESANLWHGRLGHVNFASIRK-LKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHS
S A + + WH RLGH + + + + L + SH+ S C+ +K K F +T LE I+SD+ S YYV FVD +
Subjt: FSFAYVIESANLWHGRLGHVNFASIRK-LKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHS
Query: KFTKIYLIKTKNEAGSIFLKFKAESENQLGKKI
++T +Y +K K++ F+ FK EN+ +I
Subjt: KFTKIYLIKTKNEAGSIFLKFKAESENQLGKKI
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.1e-10 | 27.19 | Show/hide |
Query: NSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLL---NRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINA-NAFSFAYVIE
+ +T+ + G L TS R+L L+ VLYVP++ +NL+S L NR ++ ++ G + +G + L+ A + F+
Subjt: NSATVGVIGKGKVILKLTSGRTLSLSNVLYVPSLRRNLVSWSLL---NRARLKIVLEGDKIVLTKNGDFVGKGYLSNGLFVLNTIFINA-NAFSFAYVIE
Query: SANLWHGRLGHVNFASIRK-LKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLI
+ + WH RLGH + A + + + L + SH+ S C +K +K F ++ LE I+SD+ S YYV FVD +++T +Y +
Subjt: SANLWHGRLGHVNFASIRK-LKDLRLINTSESHETGKYSICVESKFYKKRFKPVESRTTDLLELIHSDLADFRTTTSRGGKNYYVSFVDDHSKFTKIYLI
Query: KTKNEAGSIFLKFKAESENQLGKKIKRL
K K++ F+ FK+ EN+ +I L
Subjt: KTKNEAGSIFLKFKAESENQLGKKIKRL
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