; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0068101 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0068101
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy1-copia retrotransposon protein
Genome locationCMiso1.1chr03:11634872..11635660
RNA-Seq ExpressionCmc03g0068101
SyntenyCmc03g0068101
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035900.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]1.3e-10591.94Show/hide
Query:  MKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTRLDIAYVVSRLSKYTHNP
        MKDLGEADVIL VKIRK KTSLSLCQSHYVEKILKKFDS DVSPVRTPFD SKHLKKNKGDSVSQPEYAKIIGS+MYLMNYTRLDIAYVVSRLS+YTHNP
Subjt:  MKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTRLDIAYVVSRLSKYTHNP

Query:  DRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIALELAGQEAEWIKNLLGG
        DRY WDALRH LRYLKGTIDYCLHFNKFP VLEGYCD NWVTDND+VNSTSGYVFLLGGGAISWKSAKQTCIARSTMESE IALELAGQEAEWIKNLLG 
Subjt:  DRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIALELAGQEAEWIKNLLGG

Query:  VPLWGTSVLCP
        VPL G   LCP
Subjt:  VPLWGTSVLCP

KAA0036644.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.8e-10592.31Show/hide
Query:  MKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTRLDIAYVVSRLSKYTHNP
        MKDLGEADVIL VKIRK KTSLSLCQSHYVEKILKKFDS DVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGS+MYLMNYTR DIAY VSRLS+YTHNP
Subjt:  MKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTRLDIAYVVSRLSKYTHNP

Query:  DRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIALELAGQEAEWIKNLLGG
        +RYHWDALRH LRYLKGTIDYCLHF KFP VLEGYCD NWVTDNDEVNSTSGYVFLLGG AISWKS KQTCIARSTMESE IALELAGQEAEWIKNLLG 
Subjt:  DRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIALELAGQEAEWIKNLLGG

Query:  VPLWGTSV
        VPLWGTSV
Subjt:  VPLWGTSV

KAA0045258.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]2.8e-10586.1Show/hide
Query:  LSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVR---------TPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTRLD
        + SHFEMKDLGEAD+IL VKIRK K+S+SLCQSHYVEKILKKFDS DVSPVR         TPFDASKHLKKNKGDSVSQP+YAKIIGS+MYLMNYTRLD
Subjt:  LSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVR---------TPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTRLD

Query:  IAYVVSRLSKYTHNPDRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIALE
        IAY VSRLS+YTHNPDRYHWDALRH LRYLKG IDYCLHFNKFP VLEGYCD NWVTDNDEVNSTSGYV LLGGGA+SWKSAKQTCIARSTMESE IALE
Subjt:  IAYVVSRLSKYTHNPDRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIALE

Query:  LAGQEAEWIKNLLGGVPLWGTSV
        LAG E EWIKNLLG VPLWGTSV
Subjt:  LAGQEAEWIKNLLGGVPLWGTSV

KAA0049695.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.1e-11290.62Show/hide
Query:  MELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTRL
        MEL+T+TK FLSSHFEMKDLGEADVIL VKIRK KTSLSLCQSHYVEKILKKFD  DVSPVRTPFDASKHL KNKGDSVSQPEYAKIIGS+MYLMNYTR 
Subjt:  MELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTRL

Query:  DIAYVVSRLSKYTHNPDRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIAL
        DIAY VSRLS+YTHNPDRYHWD LRH LRYLKGTIDYCL+FNKFP VLEGYCD NWVTDNDEVNSTSGYVFLLGGGAISWKS KQTCIARSTMESE IAL
Subjt:  DIAYVVSRLSKYTHNPDRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIAL

Query:  ELAGQEAEWIKNLLGGVPLWGTSV
        ELAGQEAEWIKNLLG VPLWGT V
Subjt:  ELAGQEAEWIKNLLGGVPLWGTSV

TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]1.7e-11892.64Show/hide
Query:  MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMY
        MLIFGTNMELIT+TK FLSSHFEMKDLGEADVIL VKIRK KTSLSLCQSHYVEKILKKFDS DVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGS+MY
Subjt:  MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMY

Query:  LMNYTRLDIAYVVSRLSKYTHNPDRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTM
        LMNYTR DIAY VSRLS+YTHNP+RYHWDALRH LRYLKGTIDYCLHF KFP VLEGYCD NWVTDNDEVNSTSGYVFLLGGGAISWKS KQTCIARSTM
Subjt:  LMNYTRLDIAYVVSRLSKYTHNPDRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTM

Query:  ESEIIALELAGQEAEWIKNLLGGVPLWGTSV
        ESE IALELAGQEAEWIKNLLG VPLWGTSV
Subjt:  ESEIIALELAGQEAEWIKNLLGGVPLWGTSV

TrEMBL top hitse value%identityAlignment
A0A5A7SZD1 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-10592.31Show/hide
Query:  MKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTRLDIAYVVSRLSKYTHNP
        MKDLGEADVIL VKIRK KTSLSLCQSHYVEKILKKFDS DVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGS+MYLMNYTR DIAY VSRLS+YTHNP
Subjt:  MKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTRLDIAYVVSRLSKYTHNP

Query:  DRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIALELAGQEAEWIKNLLGG
        +RYHWDALRH LRYLKGTIDYCLHF KFP VLEGYCD NWVTDNDEVNSTSGYVFLLGG AISWKS KQTCIARSTMESE IALELAGQEAEWIKNLLG 
Subjt:  DRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIALELAGQEAEWIKNLLGG

Query:  VPLWGTSV
        VPLWGTSV
Subjt:  VPLWGTSV

A0A5A7TQW7 Ty1-copia retrotransposon protein1.4e-10586.1Show/hide
Query:  LSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVR---------TPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTRLD
        + SHFEMKDLGEAD+IL VKIRK K+S+SLCQSHYVEKILKKFDS DVSPVR         TPFDASKHLKKNKGDSVSQP+YAKIIGS+MYLMNYTRLD
Subjt:  LSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVR---------TPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTRLD

Query:  IAYVVSRLSKYTHNPDRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIALE
        IAY VSRLS+YTHNPDRYHWDALRH LRYLKG IDYCLHFNKFP VLEGYCD NWVTDNDEVNSTSGYV LLGGGA+SWKSAKQTCIARSTMESE IALE
Subjt:  IAYVVSRLSKYTHNPDRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIALE

Query:  LAGQEAEWIKNLLGGVPLWGTSV
        LAG E EWIKNLLG VPLWGTSV
Subjt:  LAGQEAEWIKNLLGGVPLWGTSV

A0A5A7U7W6 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-11290.62Show/hide
Query:  MELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTRL
        MEL+T+TK FLSSHFEMKDLGEADVIL VKIRK KTSLSLCQSHYVEKILKKFD  DVSPVRTPFDASKHL KNKGDSVSQPEYAKIIGS+MYLMNYTR 
Subjt:  MELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTRL

Query:  DIAYVVSRLSKYTHNPDRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIAL
        DIAY VSRLS+YTHNPDRYHWD LRH LRYLKGTIDYCL+FNKFP VLEGYCD NWVTDNDEVNSTSGYVFLLGGGAISWKS KQTCIARSTMESE IAL
Subjt:  DIAYVVSRLSKYTHNPDRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIAL

Query:  ELAGQEAEWIKNLLGGVPLWGTSV
        ELAGQEAEWIKNLLG VPLWGT V
Subjt:  ELAGQEAEWIKNLLGGVPLWGTSV

A0A5D3C5T2 Ty1-copia retrotransposon protein8.3e-11992.64Show/hide
Query:  MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMY
        MLIFGTNMELIT+TK FLSSHFEMKDLGEADVIL VKIRK KTSLSLCQSHYVEKILKKFDS DVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGS+MY
Subjt:  MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMY

Query:  LMNYTRLDIAYVVSRLSKYTHNPDRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTM
        LMNYTR DIAY VSRLS+YTHNP+RYHWDALRH LRYLKGTIDYCLHF KFP VLEGYCD NWVTDNDEVNSTSGYVFLLGGGAISWKS KQTCIARSTM
Subjt:  LMNYTRLDIAYVVSRLSKYTHNPDRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTM

Query:  ESEIIALELAGQEAEWIKNLLGGVPLWGTSV
        ESE IALELAGQEAEWIKNLLG VPLWGTSV
Subjt:  ESEIIALELAGQEAEWIKNLLGGVPLWGTSV

A0A5D3D697 Ty1-copia retrotransposon protein6.2e-10691.94Show/hide
Query:  MKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTRLDIAYVVSRLSKYTHNP
        MKDLGEADVIL VKIRK KTSLSLCQSHYVEKILKKFDS DVSPVRTPFD SKHLKKNKGDSVSQPEYAKIIGS+MYLMNYTRLDIAYVVSRLS+YTHNP
Subjt:  MKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTRLDIAYVVSRLSKYTHNP

Query:  DRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIALELAGQEAEWIKNLLGG
        DRY WDALRH LRYLKGTIDYCLHFNKFP VLEGYCD NWVTDND+VNSTSGYVFLLGGGAISWKSAKQTCIARSTMESE IALELAGQEAEWIKNLLG 
Subjt:  DRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIALELAGQEAEWIKNLLGG

Query:  VPLWGTSVLCP
        VPL G   LCP
Subjt:  VPLWGTSVLCP

SwissProt top hitse value%identityAlignment
P04146 Copia protein6.1e-2634.23Show/hide
Query:  NMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTR
        +M  +   K +L   F M DL E    + ++I  ++  + L QS YV+KIL KF+  + + V TP  +  + +    D         +IG +MY+M  TR
Subjt:  NMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYTR

Query:  LDIAYVVSRLSKYTHNPDRYHWDAL-RHLRYLKGTIDYCLHFNK---FPVVLEGYCDTNWVTDNDEVNSTSGYVF-LLGGGAISWKSAKQTCIARSTMES
         D+   V+ LS+Y+   +   W  L R LRYLKGTID  L F K   F   + GY D++W     +  ST+GY+F +     I W + +Q  +A S+ E+
Subjt:  LDIAYVVSRLSKYTHNPDRYHWDAL-RHLRYLKGTIDYCLHFNK---FPVVLEGYCDTNWVTDNDEVNSTSGYVF-LLGGGAISWKSAKQTCIARSTMES

Query:  EIIALELAGQEAEWIKNLLGGV
        E +AL  A +EA W+K LL  +
Subjt:  EIIALELAGQEAEWIKNLLGGV

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-3941.56Show/hide
Query:  MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTS--LSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKK--------NKGDSVSQPE
        MLI G +  LI + K  LS  F+MKDLG A  IL +KI +++TS  L L Q  Y+E++L++F+  +  PV TP      L K         KG+    P 
Subjt:  MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTS--LSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKK--------NKGDSVSQPE

Query:  YAKIIGSMMYLMNYTRLDIAYVVSRLSKYTHNPDRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSA
        Y+  +GS+MY M  TR DIA+ V  +S++  NP + HW+A++  LRYL+GT   CL F     +L+GY D +   D D   S++GY+F   GGAISW+S 
Subjt:  YAKIIGSMMYLMNYTRLDIAYVVSRLSKYTHNPDRYHWDALRH-LRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSA

Query:  KQTCIARSTMESEIIALELAGQEAEWIKNLL
         Q C+A ST E+E IA    G+E  W+K  L
Subjt:  KQTCIARSTMESEIIALELAGQEAEWIKNLL

P92519 Uncharacterized mitochondrial protein AtMg008105.2e-2532.26Show/hide
Query:  MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMY
        +L+ G++  L+      LSS F MKDLG     L ++I+   + L L Q+ Y E+IL     +D  P+ TP     +   +        ++  I+G++ Y
Subjt:  MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMY

Query:  LMNYTRLDIAYVVSRLSKYTHNPDRYHWDAL-RHLRYLKGTIDYCLHFNK-FPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARST
        L   TR DI+Y V+ + +  H P    +D L R LRY+KGTI + L+ +K   + ++ +CD++W        ST+G+   LG   ISW + +Q  ++RS+
Subjt:  LMNYTRLDIAYVVSRLSKYTHNPDRYHWDAL-RHLRYLKGTIDYCLHFNK-FPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARST

Query:  MESEIIALELAGQEAEW
         E+E  AL L   E  W
Subjt:  MESEIIALELAGQEAEW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.1e-3037.22Show/hide
Query:  MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQP-EYAKIIGSMM
        +LI G +  L+  T   LS  F +KD  E    L ++ ++  T L L Q  Y+  +L + + I   PV TP   S  L    G  ++ P EY  I+GS+ 
Subjt:  MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQP-EYAKIIGSMM

Query:  YLMNYTRLDIAYVVSRLSKYTHNPDRYHWDAL-RHLRYLKGTIDYCLHFNKFPVV-LEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARS
        YL  +TR DI+Y V+RLS++ H P   H  AL R LRYL GT ++ +   K   + L  Y D +W  D D+  ST+GY+  LG   ISW S KQ  + RS
Subjt:  YLMNYTRLDIAYVVSRLSKYTHNPDRYHWDAL-RHLRYLKGTIDYCLHFNKFPVV-LEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARS

Query:  TMESEIIALELAGQEAEWIKNLL
        + E+E  ++     E +WI +LL
Subjt:  TMESEIIALELAGQEAEWIKNLL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.4e-3036.32Show/hide
Query:  MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQP-EYAKIIGSMM
        +LI G +  L+  T   LS  F +K+  +    L ++ ++    L L Q  Y   +L + + +   PV TP   S  L  + G  +  P EY  I+GS+ 
Subjt:  MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQP-EYAKIIGSMM

Query:  YLMNYTRLDIAYVVSRLSKYTHNPDRYHWDAL-RHLRYLKGTIDYCLHFNKFPVV-LEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARS
        YL  +TR D++Y V+RLS+Y H P   HW+AL R LRYL GT D+ +   K   + L  Y D +W  D D+  ST+GY+  LG   ISW S KQ  + RS
Subjt:  YLMNYTRLDIAYVVSRLSKYTHNPDRYHWDAL-RHLRYLKGTIDYCLHFNKFPVV-LEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARS

Query:  TMESEIIALELAGQEAEWIKNLL
        + E+E  ++     E +WI +LL
Subjt:  TMESEIIALELAGQEAEWIKNLL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.7e-2631.96Show/hide
Query:  MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNK-GDSVSQPEYAKIIGSMM
        ++I   N   + E K  L S F+++DLG     L ++I +    +++CQ  Y   +L +   +   P   P D S     +  GD V    Y ++IG +M
Subjt:  MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNK-GDSVSQPEYAKIIGSMM

Query:  YLMNYTRLDIAYVVSRLSKYTHNPDRYHWDA-LRHLRYLKGTIDYCLHF-NKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARS
        YL   TRLDI++ V++LS+++  P   H  A ++ L Y+KGT+   L + ++  + L+ + D ++ +  D   ST+GY   LG   ISWKS KQ  +++S
Subjt:  YLMNYTRLDIAYVVSRLSKYTHNPDRYHWDA-LRHLRYLKGTIDYCLHF-NKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARS

Query:  TMESEIIALELAGQEAEWI
        + E+E  AL  A  E  W+
Subjt:  TMESEIIALELAGQEAEWI

ATMG00810.1 DNA/RNA polymerases superfamily protein3.7e-2632.26Show/hide
Query:  MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMY
        +L+ G++  L+      LSS F MKDLG     L ++I+   + L L Q+ Y E+IL     +D  P+ TP     +   +        ++  I+G++ Y
Subjt:  MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMY

Query:  LMNYTRLDIAYVVSRLSKYTHNPDRYHWDAL-RHLRYLKGTIDYCLHFNK-FPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARST
        L   TR DI+Y V+ + +  H P    +D L R LRY+KGTI + L+ +K   + ++ +CD++W        ST+G+   LG   ISW + +Q  ++RS+
Subjt:  LMNYTRLDIAYVVSRLSKYTHNPDRYHWDAL-RHLRYLKGTIDYCLHFNK-FPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARST

Query:  MESEIIALELAGQEAEW
         E+E  AL L   E  W
Subjt:  MESEIIALELAGQEAEW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATCTTTGGAACAAACATGGAGTTAATAACTGAAACTAAGTTATTTCTCTCGTCACACTTTGAAATGAAAGACCTAGGAGAAGCAGACGTAATCCTAAGT
GTTAAAATCAGGAAAAAGAAAACTAGTTTGTCTCTATGTCAATCTCACTACGTTGAGAAAATACTAAAGAAGTTTGATTCCATTGATGTTTCTCCTGTGAGAACT
CCCTTTGACGCTAGTAAACATCTTAAGAAGAATAAAGGAGATAGTGTGTCTCAACCTGAATATGCAAAGATCATAGGTAGTATGATGTATTTAATGAATTACACT
AGACTGGATATTGCATATGTTGTCAGTAGATTAAGTAAATATACACATAATCCTGATAGATACCACTGGGATGCCTTACGCCATCTAAGATATCTTAAAGGGACA
ATAGATTATTGTTTACACTTCAACAAATTTCCTGTCGTATTAGAAGGATATTGTGATACTAATTGGGTCACAGATAATGATGAGGTTAACTCTACTAGTGGGTAT
GTATTTTTGCTCGGAGGTGGAGCAATATCTTGGAAGTCTGCAAAACAGACTTGTATAGCCAGATCCACGATGGAATCCGAGATTATAGCATTAGAGTTGGCAGGA
CAGGAGGCTGAGTGGATCAAAAATCTACTAGGAGGTGTACCATTGTGGGGGACATCTGTACTGTGTCCATACAGTATGATTCGCAAGCTGCGATATGTACTGCCA
AGAACAGTGTGTATAATGGTAAGAGTAGACACATACGTCTTAGGCATGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAATCTTTGGAACAAACATGGAGTTAATAACTGAAACTAAGTTATTTCTCTCGTCACACTTTGAAATGAAAGACCTAGGAGAAGCAGACGTAATCCTAAGT
GTTAAAATCAGGAAAAAGAAAACTAGTTTGTCTCTATGTCAATCTCACTACGTTGAGAAAATACTAAAGAAGTTTGATTCCATTGATGTTTCTCCTGTGAGAACT
CCCTTTGACGCTAGTAAACATCTTAAGAAGAATAAAGGAGATAGTGTGTCTCAACCTGAATATGCAAAGATCATAGGTAGTATGATGTATTTAATGAATTACACT
AGACTGGATATTGCATATGTTGTCAGTAGATTAAGTAAATATACACATAATCCTGATAGATACCACTGGGATGCCTTACGCCATCTAAGATATCTTAAAGGGACA
ATAGATTATTGTTTACACTTCAACAAATTTCCTGTCGTATTAGAAGGATATTGTGATACTAATTGGGTCACAGATAATGATGAGGTTAACTCTACTAGTGGGTAT
GTATTTTTGCTCGGAGGTGGAGCAATATCTTGGAAGTCTGCAAAACAGACTTGTATAGCCAGATCCACGATGGAATCCGAGATTATAGCATTAGAGTTGGCAGGA
CAGGAGGCTGAGTGGATCAAAAATCTACTAGGAGGTGTACCATTGTGGGGGACATCTGTACTGTGTCCATACAGTATGATTCGCAAGCTGCGATATGTACTGCCA
AGAACAGTGTGTATAATGGTAAGAGTAGACACATACGTCTTAGGCATGCAGTAG
Protein sequenceShow/hide protein sequence
MLIFGTNMELITETKLFLSSHFEMKDLGEADVILSVKIRKKKTSLSLCQSHYVEKILKKFDSIDVSPVRTPFDASKHLKKNKGDSVSQPEYAKIIGSMMYLMNYT
RLDIAYVVSRLSKYTHNPDRYHWDALRHLRYLKGTIDYCLHFNKFPVVLEGYCDTNWVTDNDEVNSTSGYVFLLGGGAISWKSAKQTCIARSTMESEIIALELAG
QEAEWIKNLLGGVPLWGTSVLCPYSMIRKLRYVLPRTVCIMVRVDTYVLGMQ