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Cmc03g0068181 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0068181
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationCMiso1.1chr03:11754508..11755128
RNA-Seq ExpressionCmc03g0068181
SyntenyCmc03g0068181
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033070.1 putative mitochondrial protein [Cucumis melo var. makuwa]7.4e-11799.51Show/hide
Query:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR
        MMSNQ LVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR
Subjt:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR

Query:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG
        STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG
Subjt:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG

Query:  WCPQDM
        WCPQDM
Subjt:  WCPQDM

XP_031744753.1 uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus]8.8e-10291.5Show/hide
Query:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR
        MM NQQLVKEG+LCKDPERYRRLVGKLNYLT+TRPDIAY VSVVSQFMSSPTVDHWAAVEQILCY KAAPGRGILYKDHGHTRVECFSDADWA SREDRR
Subjt:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR

Query:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG
        STSGYCVFVGG LVSWKSKKQNVVSRSSA+SEYRA AQSVCEI WIHQLLSEIGFSITVPAKLWCDNQ ALHIASNPVFHERTKHIEVDC+FI  K + G
Subjt:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG

XP_031744754.1 uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus]8.8e-10291.5Show/hide
Query:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR
        MM NQQLVKEG+LCKDPERYRRLVGKLNYLT+TRPDIAY VSVVSQFMSSPTVDHWAAVEQILCY KAAPGRGILYKDHGHTRVECFSDADWA SREDRR
Subjt:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR

Query:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG
        STSGYCVFVGG LVSWKSKKQNVVSRSSA+SEYRA AQSVCEI WIHQLLSEIGFSITVPAKLWCDNQ ALHIASNPVFHERTKHIEVDC+FI  K + G
Subjt:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG

XP_031744755.1 uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus]8.8e-10291.5Show/hide
Query:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR
        MM NQQLVKEG+LCKDPERYRRLVGKLNYLT+TRPDIAY VSVVSQFMSSPTVDHWAAVEQILCY KAAPGRGILYKDHGHTRVECFSDADWA SREDRR
Subjt:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR

Query:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG
        STSGYCVFVGG LVSWKSKKQNVVSRSSA+SEYRA AQSVCEI WIHQLLSEIGFSITVPAKLWCDNQ ALHIASNPVFHERTKHIEVDC+FI  K + G
Subjt:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG

XP_031744758.1 uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus]8.8e-10291.5Show/hide
Query:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR
        MM NQQLVKEG+LCKDPERYRRLVGKLNYLT+TRPDIAY VSVVSQFMSSPTVDHWAAVEQILCY KAAPGRGILYKDHGHTRVECFSDADWA SREDRR
Subjt:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR

Query:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG
        STSGYCVFVGG LVSWKSKKQNVVSRSSA+SEYRA AQSVCEI WIHQLLSEIGFSITVPAKLWCDNQ ALHIASNPVFHERTKHIEVDC+FI  K + G
Subjt:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG

TrEMBL top hitse value%identityAlignment
A0A5A7SQ84 Putative mitochondrial protein3.6e-11799.51Show/hide
Query:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR
        MMSNQ LVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR
Subjt:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR

Query:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG
        STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG
Subjt:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG

Query:  WCPQDM
        WCPQDM
Subjt:  WCPQDM

A0A5A7UHS1 Retrovirus-related Pol polyprotein from transposon TNT 1-947.0e-9787.5Show/hide
Query:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR
        MMSNQQLVKEG+LCKDP+RY RLVGKLNYLT+TRPDIAY VSVVSQFMS PTVDHWAAVEQILCY KAA GRGILYKDHGHT+V+CFSDADW  SREDRR
Subjt:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR

Query:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG
        S SGYCVFVGG LVSWKSKKQNVVS SSAKSEYRA AQSVCEI WIHQLLSEIGFSITVP KLWCDNQVALHIASNPVFHE+TKHIEVDC+FI  K + G
Subjt:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG

A0A5D3CID2 Putative mitochondrial protein1.1e-9487Show/hide
Query:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR
        MM NQQLVKEGKLCKDPERYRRLVGKLNYLT+TRPDIAY VSVVSQFMS PTVDHWA VEQILCY KAAPG GIL KDHGHTRVECFSDADWA SREDRR
Subjt:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR

Query:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG
        ST GYCVFVGG LVSWKSKKQNVVS  SA+S+YRA  QSVCEI WIHQLLSEIGFSITVPAKL CDNQ ALHIASNPVFHERTKHIEVDC+FI  K + G
Subjt:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG

A0A5D3DZU1 Retrovirus-related Pol polyprotein from transposon TNT 1-947.0e-9787.5Show/hide
Query:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR
        MMSNQQLVKEG+LCKDP+RY RLVGKLNYLT+TRPDIAY VSVVSQFMS PTVDHWAAVEQILCY KAA GRGILYKDHGHT+V+CFSDADW  SREDRR
Subjt:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR

Query:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG
        S SGYCVFVGG LVSWKSKKQNVVS SSAKSEYRA AQSVCEI WIHQLLSEIGFSITVP KLWCDNQVALHIASNPVFHE+TKHIEVDC+FI  K + G
Subjt:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG

A0A6P6VCZ7 uncharacterized protein LOC1137194882.4e-8976.5Show/hide
Query:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR
        M+ N QL KEG+LC DPERYRRL+GKLNYLT+T PDIAY VSV+SQ+MSSPTVDHW AVEQ+L Y K APGRGILY +HGHTR+ECFSD+DWA  +EDRR
Subjt:  MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRR

Query:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG
        STSGYCVFVGG LVSWKSKKQNVVSRSSA++EYRA A+SVCE+ W++QLLSE+G  ++VPAKLWCDNQ ALHIASNPVFHERTKHIE+DC+F+  K + G
Subjt:  STSGYCVFVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG

SwissProt top hitse value%identityAlignment
P04146 Copia protein4.1e-2533.16Show/hide
Query:  NQQLVKEGKLCKDPERYRRLVGKLNYLTM-TRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDH--GHTRVECFSDADWAESREDRR
        N +L+   + C  P   R L+G L Y+ + TRPD+   V+++S++ S    + W  ++++L Y K      +++K +     ++  + D+DWA S  DR+
Subjt:  NQQLVKEGKLCKDPERYRRLVGKLNYLTM-TRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDH--GHTRVECFSDADWAESREDRR

Query:  STSGYCV-FVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYF
        ST+GY        L+ W +K+QN V+ SS ++EY A  ++V E  W+  LL+ I   +  P K++ DNQ  + IA+NP  H+R KHI++  +F
Subjt:  STSGYCV-FVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYF

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-2534.95Show/hide
Query:  KEGKLCKDPERYRRLVGKLNY-LTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRRSTSGYCV
        ++G + K P  Y   VG L Y +  TRPDIA+ V VVS+F+ +P  +HW AV+ IL Y +   G  + +       ++ ++DAD A   ++R+S++GY  
Subjt:  KEGKLCKDPERYRRLVGKLNY-LTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRRSTSGYCV

Query:  FVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFI
           G  +SW+SK Q  V+ S+ ++EY A  ++  E+ W+ + L E+G        ++CD+Q A+ ++ N ++H RTKHI+V  ++I
Subjt:  FVGGKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFI

P92519 Uncharacterized mitochondrial protein AtMg008103.7e-2642.31Show/hide
Query:  DPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRRSTSGYCVFVGGKLVS
        DP  +R +VG L YLT+TRPDI+Y V++V Q M  PT+  +  ++++L Y K     G+    +    V+ F D+DWA     RRST+G+C F+G  ++S
Subjt:  DPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRRSTSGYCVFVGGKLVS

Query:  WKSKKQNVVSRSSAKSEYRATAQSVCEIAW
        W +K+Q  VSRSS ++EYRA A +  E+ W
Subjt:  WKSKKQNVVSRSSAKSEYRATAQSVCEIAW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.3e-4344.74Show/hide
Query:  GKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRRSTSGYCVFVG
        G    DP  YR +VG L YL  TRPDI+Y V+ +SQFM  PT +H  A+++IL Y    P  GI  K      +  +SDADWA  ++D  ST+GY V++G
Subjt:  GKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRRSTSGYCVFVG

Query:  GKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG
           +SW SKKQ  V RSS ++EYR+ A +  E+ WI  LL+E+G  +T P  ++CDN  A ++ +NPVFH R KHI +D +FI  + + G
Subjt:  GKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.5e-4343.68Show/hide
Query:  GKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRRSTSGYCVFVG
        G    DP  YR +VG L YL  TRPD++Y V+ +SQ+M  PT DHW A++++L Y    P  GI  K      +  +SDADWA   +D  ST+GY V++G
Subjt:  GKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRRSTSGYCVFVG

Query:  GKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG
           +SW SKKQ  V RSS ++EYR+ A +  E+ WI  LL+E+G  ++ P  ++CDN  A ++ +NPVFH R KHI +D +FI  + + G
Subjt:  GKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMG

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.9e-4747.25Show/hide
Query:  DPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRRSTSGYCVFVGGKLVS
        D + YRRL+G+L YL +TR DI++ V+ +SQF  +P + H  AV +IL Y K   G+G+ Y      +++ FSDA +   ++ RRST+GYC+F+G  L+S
Subjt:  DPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRRSTSGYCVFVGGKLVS

Query:  WKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKS
        WKSKKQ VVS+SSA++EYRA + +  E+ W+ Q   E+   ++ P  L+CDN  A+HIA+N VFHERTKHIE DC+ +  +S
Subjt:  WKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKS

ATMG00240.1 Gag-Pol-related retrotransposon family protein3.1e-1238.27Show/hide
Query:  YLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRRSTSGYCVFV
        YLT+TRPD+ + V+ +SQF S+       AV ++L Y K   G+G+ Y      +++ F+D+DWA   + RRS +G+C  V
Subjt:  YLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRRSTSGYCVFV

ATMG00810.1 DNA/RNA polymerases superfamily protein2.6e-2742.31Show/hide
Query:  DPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRRSTSGYCVFVGGKLVS
        DP  +R +VG L YLT+TRPDI+Y V++V Q M  PT+  +  ++++L Y K     G+    +    V+ F D+DWA     RRST+G+C F+G  ++S
Subjt:  DPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRRSTSGYCVFVGGKLVS

Query:  WKSKKQNVVSRSSAKSEYRATAQSVCEIAW
        W +K+Q  VSRSS ++EYRA A +  E+ W
Subjt:  WKSKKQNVVSRSSAKSEYRATAQSVCEIAW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCAAATCAGCAACTTGTTAAAGAAGGAAAATTATGTAAAGATCCTGAGAGATATAGGAGACTAGTTGGAAAGTTGAACTACTTAACAATGACTCGACCAGACAT
TGCTTATTTTGTAAGTGTGGTAAGTCAGTTCATGTCTTCCCCTACAGTGGATCATTGGGCTGCAGTAGAGCAGATTCTATGTTATTCGAAAGCTGCTCCTGGACGTGGGA
TCTTATACAAAGATCATGGACATACGAGAGTTGAATGTTTTTCTGATGCTGATTGGGCGGAATCTCGAGAGGATAGGAGATCAACCTCTGGATATTGTGTCTTTGTAGGC
GGAAAGTTGGTATCATGGAAGAGTAAGAAACAAAATGTTGTTTCTCGTTCGAGTGCTAAGTCAGAATATAGAGCTACGGCACAATCTGTGTGCGAAATAGCATGGATTCA
CCAACTATTATCTGAGATAGGCTTCAGTATTACAGTGCCAGCTAAATTATGGTGTGATAATCAAGTTGCACTTCATATTGCATCTAATCCAGTATTTCATGAACGAACTA
AACATATTGAGGTGGATTGCTACTTCATTCTAAGAAAATCCAAGATGGGTTGGTGTCCACAGGATATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGTCAAATCAGCAACTTGTTAAAGAAGGAAAATTATGTAAAGATCCTGAGAGATATAGGAGACTAGTTGGAAAGTTGAACTACTTAACAATGACTCGACCAGACAT
TGCTTATTTTGTAAGTGTGGTAAGTCAGTTCATGTCTTCCCCTACAGTGGATCATTGGGCTGCAGTAGAGCAGATTCTATGTTATTCGAAAGCTGCTCCTGGACGTGGGA
TCTTATACAAAGATCATGGACATACGAGAGTTGAATGTTTTTCTGATGCTGATTGGGCGGAATCTCGAGAGGATAGGAGATCAACCTCTGGATATTGTGTCTTTGTAGGC
GGAAAGTTGGTATCATGGAAGAGTAAGAAACAAAATGTTGTTTCTCGTTCGAGTGCTAAGTCAGAATATAGAGCTACGGCACAATCTGTGTGCGAAATAGCATGGATTCA
CCAACTATTATCTGAGATAGGCTTCAGTATTACAGTGCCAGCTAAATTATGGTGTGATAATCAAGTTGCACTTCATATTGCATCTAATCCAGTATTTCATGAACGAACTA
AACATATTGAGGTGGATTGCTACTTCATTCTAAGAAAATCCAAGATGGGTTGGTGTCCACAGGATATGTGA
Protein sequenceShow/hide protein sequence
MMSNQQLVKEGKLCKDPERYRRLVGKLNYLTMTRPDIAYFVSVVSQFMSSPTVDHWAAVEQILCYSKAAPGRGILYKDHGHTRVECFSDADWAESREDRRSTSGYCVFVG
GKLVSWKSKKQNVVSRSSAKSEYRATAQSVCEIAWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCYFILRKSKMGWCPQDM