CuGenDBv2

Gene ID	Cmc03g0068221
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic
Genome location	CMiso1.1chr03:11826356..11826679
RNA-Seq Expression	Cmc03g0068221
Synteny	Cmc03g0068221
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0022900 - electron transport chain (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	IPR001268 - NADH:ubiquinone oxidoreductase, 30kDa subunit IPR037232 - NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

YP_004841786.1 NADH-plastoquinone oxidoreductase subunit J [Cucumis melo subsp. melo]

7.6e-57

100

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKS
        FWVWKS
Subjt:  FWVWKS

YP_009004047.1 NADH-plastoquinone oxidoreductase subunit J [Cucumis hystrix]

1.7e-56

99.06

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKS
        FWVWKS
Subjt:  FWVWKS

YP_009236283.1 NADH-plastoquinone oxidoreductase subunit J [Gynostemma pentaphyllum]

6.5e-56

98.11

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQG+LSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKS
        FWVWKS
Subjt:  FWVWKS

YP_009325992.1 NADH dehydrogenase subunit J [Citrullus lanatus]

6.5e-56

98.11

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQG+LSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKS
        FWVWKS
Subjt:  FWVWKS

YP_009346487.1 NADH-plastoquinone oxidoreductase subunit J [Cucumis x hytivus]

1.7e-56

99.06

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKS
        FWVWKS
Subjt:  FWVWKS

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU07 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

3.7e-57

100

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKS
        FWVWKS
Subjt:  FWVWKS

A0A249RXS5 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

3.7e-57

100

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKS
        FWVWKS
Subjt:  FWVWKS

A0A249RZ18 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

3.7e-57

100

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKS
        FWVWKS
Subjt:  FWVWKS

A0A249RZ69 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

3.7e-57

100

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKS
        FWVWKS
Subjt:  FWVWKS

A0A286NFY1 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

3.7e-57

100

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKS
        FWVWKS
Subjt:  FWVWKS

SwissProt top hits

e value

%identity

Alignment

P31174 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.8e-56

91.51

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQG LSSWLVKHGL+HRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTR+EYGIDQPEEVCIK+F AR NP+IPS+
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKS
        FWVWKS
Subjt:  FWVWKS

Q09MH5 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.0e-56

92.45

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQG LS+WLVKHGLVHRSLGFDYQGIETLQIKPE+WHS+AVILY+YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEEVCIKVFA R NPKIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKS
        FWVWKS
Subjt:  FWVWKS

Q0ZJ17 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.0e-56

93.4

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQG LS+WLVKHGLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEEVCIKVFA+R NP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKS
        FWVWKS
Subjt:  FWVWKS

Q4VZH2 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

2.2e-59

99.06

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKS
        FWVWKS
Subjt:  FWVWKS

Q9M3M1 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.8e-56

93.4

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQG LS+WLVKHGLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEEVCIKVFA R NP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKS
        FWVWKS
Subjt:  FWVWKS

Arabidopsis top hits

e value

%identity

Alignment

ATCG00420.1 NADH dehydrogenase subunit J

1.7e-54

88.79

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQG LS WL K GLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG++Q EEVCIKVF  R NP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKST
        FWVWKST
Subjt:  FWVWKST

Sequences

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CDS sequence

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ATGCAGGGTAATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCCGAGGAATGGCA
TTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCGGACTGTTAGCTAGTGTGTATCATCTTACGAGAA
TCGAGTATGGTATAGATCAACCGGAAGAGGTATGCATAAAAGTATTTGCCGCAAGGATAAATCCTAAAATTCCATCTGTTTTCTGGGTTTGGAAAAGTACATAA

mRNA sequence

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Protein sequence

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MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKST

Cmc03g0068221 (gene) of Melon (Charmono) v1.1 genome