| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0046085.1 pol protein [Cucumis melo var. makuwa] | 4.1e-179 | 88.19 | Show/hide |
Query: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
+RASKLLS GTW ILASVVDTREVDVSLSSEP+VRDY DVF EEL GLPPHRE+EFAIELEP TVPISRA YRMA AELKELKVQLQELLDKGFIRPSVS
Subjt: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
Query: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YP+PRIDDLFDQLQ A VFSK DLR GYHQLRIK+ DVPKT FRSRYGHYEFIVMSFGLTNAP VFM
Subjt: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
Query: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
DLMN VFREFLD FVIVFI+DILIYSKTE EHEEHLRMVL+ LR NKLYAKFSKCEFWLKQVSFLGHVVS AGVSVDPAKIEAVT W RPST+SEVRS L
Subjt: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
Query: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
L GYYRRFVENFSRI T LTQLTRKGA FVWSKACE+SFQNLKQKLV APVL VP+GSG FVI
Subjt: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
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| KAA0047433.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 8.3e-180 | 88.46 | Show/hide |
Query: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
+RASKLLS GTW ILASVVDTREVDVSLSSEP+VRDY DVF EEL GLPPHRE+EFAIELEP TVPISRA YRMA AELKELKVQLQELLDKGFIRPSVS
Subjt: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
Query: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YP+PRIDDLFDQLQ A VFSK DLR GYHQLRIK+ DVPKT FRSRYGHYEFIVMSFGLTNAP VFM
Subjt: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
Query: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
DLMN VFREFLD FVIVFI+DILIYSKTE EHEEHLR+VL+ LR NKLYAKFSKCEFWLKQVSFLGHVVS AGVSVDPAKIEAVT W RPST+SEVRS L
Subjt: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
Query: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
GL GYYRRFVENFSRI T LTQLTRKGA FVWSKACEDSFQNLKQKLV APVL VP+GSG FVI
Subjt: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
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| KAA0048479.1 pol protein [Cucumis melo var. makuwa] | 1.3e-180 | 88.74 | Show/hide |
Query: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
+RASKLLS GTW ILASVVDTREVDVSLSSEP+VRDY DVF EEL GLPPHRE+EFAIELEP TVPIS+A YRMA AELKELKVQLQELLDKGFIRPSVS
Subjt: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
Query: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YP+PRIDDLFDQLQEA VFSK DLR GYHQLRIK+ DVPKTTFRSRYGHYEFIVMSFGLTNAP VFM
Subjt: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
Query: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
DLMN VFREFLD FVIVFINDILIYSKTE EHEEHLRMVL+ LR NKLYAKFSKCEFWLKQVSFL HVVS AGVSVDP KIEAVT W RPST+SEVRS L
Subjt: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
Query: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
GL GYYRRFVENFSRI T LTQLTRKG SFVWSKACEDSFQNLKQKLV APVL VP+GSG FVI
Subjt: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
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| KAA0048687.1 pol protein [Cucumis melo var. makuwa] | 8.3e-180 | 88.46 | Show/hide |
Query: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
+RASKLLS GTW ILASVVDTRE DVSLSSEP+VRDY DVF EEL GLPPHRE+EFAIELEP TVPISRA YRMA AELKELKVQLQELLDKGFIRPSVS
Subjt: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
Query: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YP+PRIDDLFDQLQ A VFSK DLR GYHQLRIK+ DVPKT FRSRYGHYEFIVMSFGLTNAP VFM
Subjt: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
Query: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
DLMN VFREFLD FVIVFI+DILIYSKTE EHEEHLRMVL+ LR NKLYAKFSKCEFWLKQVSFLGHVVS AGVSVDPAKIEAVT W RPST+SEVRS L
Subjt: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
Query: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
GL GYYRRFVENFSRI T LTQLTRKGA FVWSKACEDSFQNLKQKLV APVL VP+GSG FVI
Subjt: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
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| TYK01613.1 pol protein [Cucumis melo var. makuwa] | 4.1e-179 | 88.19 | Show/hide |
Query: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
+RASKLLS GTW ILASVVDTRE DVSLSSEP+VRDY DVF EEL GLPPHRE+EFAIELEP TVPISRA YRMA AELKELKVQLQELLDKGFIRPSVS
Subjt: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
Query: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YP+PRIDDLFDQLQ A VFSK DLR GYHQLRIK+ DVPKT FRSRYGHYEFIVMSFGLTNAP VFM
Subjt: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
Query: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
DLMN VFREFLD FVIVFI+DILIYSKTE EHEEHLRMVL+ LR NKLYAKFSKCEFWLKQVSFLGHVVS AGVSVDPAKIEAVT W RPST+SEVRS L
Subjt: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
Query: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
GL GYYRRFVENFSRI T LTQLTRKGA FVWSKACEDSFQ LKQKLV APVL VP+GSG FVI
Subjt: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TV57 Ty3-gypsy retrotransposon protein | 4.0e-180 | 88.46 | Show/hide |
Query: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
+RASKLLS GTW ILASVVDTREVDVSLSSEP+VRDY DVF EEL GLPPHRE+EFAIELEP TVPISRA YRMA AELKELKVQLQELLDKGFIRPSVS
Subjt: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
Query: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YP+PRIDDLFDQLQ A VFSK DLR GYHQLRIK+ DVPKT FRSRYGHYEFIVMSFGLTNAP VFM
Subjt: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
Query: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
DLMN VFREFLD FVIVFI+DILIYSKTE EHEEHLR+VL+ LR NKLYAKFSKCEFWLKQVSFLGHVVS AGVSVDPAKIEAVT W RPST+SEVRS L
Subjt: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
Query: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
GL GYYRRFVENFSRI T LTQLTRKGA FVWSKACEDSFQNLKQKLV APVL VP+GSG FVI
Subjt: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
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| A0A5A7TXE4 Reverse transcriptase | 2.0e-179 | 88.19 | Show/hide |
Query: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
+RASKLLS GTW ILASVVDTREVDVSLSSEP+VRDY DVF EEL GLPPHRE+EFAIELEP TVPISRA YRMA AELKELKVQLQELLDKGFIRPSVS
Subjt: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
Query: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YP+PRIDDLFDQLQ A VFSK DLR GYHQLRIK+ DVPKT FRSRYGHYEFIVMSFGLTNAP VFM
Subjt: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
Query: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
DLMN VFREFLD FVIVFI+DILIYSKTE EHEEHLRMVL+ LR NKLYAKFSKCEFWLKQVSFLGHVVS AGVSVDPAKIEAVT W RPST+SEVRS L
Subjt: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
Query: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
L GYYRRFVENFSRI T LTQLTRKGA FVWSKACE+SFQNLKQKLV APVL VP+GSG FVI
Subjt: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
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| A0A5A7U330 Reverse transcriptase | 4.0e-180 | 88.46 | Show/hide |
Query: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
+RASKLLS GTW ILASVVDTRE DVSLSSEP+VRDY DVF EEL GLPPHRE+EFAIELEP TVPISRA YRMA AELKELKVQLQELLDKGFIRPSVS
Subjt: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
Query: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YP+PRIDDLFDQLQ A VFSK DLR GYHQLRIK+ DVPKT FRSRYGHYEFIVMSFGLTNAP VFM
Subjt: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
Query: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
DLMN VFREFLD FVIVFI+DILIYSKTE EHEEHLRMVL+ LR NKLYAKFSKCEFWLKQVSFLGHVVS AGVSVDPAKIEAVT W RPST+SEVRS L
Subjt: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
Query: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
GL GYYRRFVENFSRI T LTQLTRKGA FVWSKACEDSFQNLKQKLV APVL VP+GSG FVI
Subjt: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
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| A0A5A7U4W0 Pol protein | 6.2e-181 | 88.74 | Show/hide |
Query: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
+RASKLLS GTW ILASVVDTREVDVSLSSEP+VRDY DVF EEL GLPPHRE+EFAIELEP TVPIS+A YRMA AELKELKVQLQELLDKGFIRPSVS
Subjt: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
Query: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YP+PRIDDLFDQLQEA VFSK DLR GYHQLRIK+ DVPKTTFRSRYGHYEFIVMSFGLTNAP VFM
Subjt: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
Query: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
DLMN VFREFLD FVIVFINDILIYSKTE EHEEHLRMVL+ LR NKLYAKFSKCEFWLKQVSFL HVVS AGVSVDP KIEAVT W RPST+SEVRS L
Subjt: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
Query: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
GL GYYRRFVENFSRI T LTQLTRKG SFVWSKACEDSFQNLKQKLV APVL VP+GSG FVI
Subjt: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
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| A0A5D3BPI1 Reverse transcriptase | 2.0e-179 | 88.19 | Show/hide |
Query: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
+RASKLLS GTW ILASVVDTRE DVSLSSEP+VRDY DVF EEL GLPPHRE+EFAIELEP TVPISRA YRMA AELKELKVQLQELLDKGFIRPSVS
Subjt: MRASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVS
Query: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YP+PRIDDLFDQLQ A VFSK DLR GYHQLRIK+ DVPKT FRSRYGHYEFIVMSFGLTNAP VFM
Subjt: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFM
Query: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
DLMN VFREFLD FVIVFI+DILIYSKTE EHEEHLRMVL+ LR NKLYAKFSKCEFWLKQVSFLGHVVS AGVSVDPAKIEAVT W RPST+SEVRS L
Subjt: DLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSIL
Query: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
GL GYYRRFVENFSRI T LTQLTRKGA FVWSKACEDSFQ LKQKLV APVL VP+GSG FVI
Subjt: GLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVLAVPEGSGCFVI
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.1e-54 | 34.32 | Show/hide |
Query: MVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNK
+++ Y D+ E L + + I + + S+ SY A + E++ Q+Q++L++G IR S SP+ +P+ V KK+D S R+ IDYR+LN+
Subjt: MVRDYLDVFLEELSGLPPHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNK
Query: VTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFMDLMNIVFREFLDNFVIVFINDILIYSK
+TV +++P+P +D++ +L F+ DL G+HQ+ + V KT F +++GHYE++ M FGL NAP F MN + R L+ +V+++DI+++S
Subjt: VTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFMDLMNIVFREFLDNFVIVFINDILIYSK
Query: TEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSILGLTGYYRRFVENFSRITTSLTQLTRKG
+ +EH + L +V E L L + KCEF ++ +FLGHV++ G+ +P KIEA+ + P+ E+++ LGLTGYYR+F+ NF+ I +T+ +K
Subjt: TEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSILGLTGYYRRFVENFSRITTSLTQLTRKG
Query: ASFVWSKACEDS-FQNLKQKLVIAPVLAVPEGSGCFVI
+ DS F+ LK + P+L VP+ + F +
Subjt: ASFVWSKACEDS-FQNLKQKLVIAPVLAVPEGSGCFVI
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| P0CT41 Transposon Tf2-12 polyprotein | 4.0e-52 | 33.55 | Show/hide |
Query: PHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEA
P + +EF +EL + +Y + +++ + ++ + L G IR S + PV+FV KK+G++R+ +DY+ LNK N YP+P I+ L ++Q +
Subjt: PHREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEA
Query: KVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFMDLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLY
+F+K DL+ YH +R++ D K FR G +E++VM +G++ AP F +N + E ++ V+ +++DILI+SK+E EH +H++ VL+ L+ L
Subjt: KVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFMDLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLY
Query: AKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSILGLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVI
+KCEF QV F+G+ +S G + I+ V W +P E+R LG Y R+F+ S++T L L +K + W+ + +N+KQ LV
Subjt: AKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSILGLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVI
Query: APVL
PVL
Subjt: APVL
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.1e-54 | 35.08 | Show/hide |
Query: PISRASYRMATAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLG
PI Y +A E++ Q+QE+L++G IR S SP+ +P V KK R+ IDYR+LN++T+ ++YP+P +D++ +L + + F+ DL G
Subjt: PISRASYRMATAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLG
Query: YHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFMDLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLK
+HQ+ + + KT F ++ GHYE++ M FGL NAP F MN + R L+ +V+++DI+I+S + EH +++V L L + KCEF K
Subjt: YHQLRIKNSDVPKTTFRSRYGHYEFIVMSFGLTNAPGVFMDLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLK
Query: QVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSILGLTGYYRRFVENFSRITTSLTQLTRKGASFVWSK-ACEDSFQNLKQKLVIAPVLAVPEGS
+ +FLGH+V+ G+ +P K++A+ S+ P+ E+R+ LGLTGYYR+F+ N++ I +T +K K ++F+ LK ++ P+L +P+
Subjt: QVSFLGHVVSNAGVSVDPAKIEAVTSWLRPSTISEVRSILGLTGYYRRFVENFSRITTSLTQLTRKGASFVWSK-ACEDSFQNLKQKLVIAPVLAVPEGS
Query: GCFVI
FV+
Subjt: GCFVI
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 1.8e-52 | 34.44 | Show/hide |
Query: ASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEE------LSGLPP------HREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELL
AS L G +S + S + + E + + S L V+L++ + LPP + ++ IE++P Y + +E+ +Q+LL
Subjt: ASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEE------LSGLPP------HREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELL
Query: DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSF
D FI PS SP +PV+ V KKDG+ RLC+DYR LNK T+ + +P+PRID+L ++ A++F+ DL GYHQ+ ++ D KT F + G YE+ VM F
Subjt: DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSF
Query: GLTNAPGVFMDLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRP
GL NAP F M FR+ FV V+++DILI+S++ EEH +HL VLE L+ L K KC+F ++ FLG+ + ++ K A+ + P
Subjt: GLTNAPGVFMDLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRP
Query: STISEVRSILGLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVL
T+ + + LG+ YYRRF+ N S+I + + W++ + + + LK L +PVL
Subjt: STISEVRSILGLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 2.4e-52 | 34.44 | Show/hide |
Query: ASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEE------LSGLPP------HREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELL
AS L G +S + S + + E + + S L V+L++ + LPP + ++ IE++P Y + +E+ +Q+LL
Subjt: ASKLLSHGTWSILASVVDTREVDVSLSSEPMVRDYLDVFLEE------LSGLPP------HREIEFAIELEPSTVPISRASYRMATAELKELKVQLQELL
Query: DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSF
D FI PS SP +PV+ V KKDG+ RLC+DYR LNK T+ + +P+PRID+L ++ A++F+ DL GYHQ+ ++ D KT F + G YE+ VM F
Subjt: DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPMPRIDDLFDQLQEAKVFSKFDLRLGYHQLRIKNSDVPKTTFRSRYGHYEFIVMSF
Query: GLTNAPGVFMDLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRP
GL NAP F M FR+ FV V+++DILI+S++ EEH +HL VLE L+ L K KC+F ++ FLG+ + ++ K A+ + P
Subjt: GLTNAPGVFMDLMNIVFREFLDNFVIVFINDILIYSKTEEEHEEHLRMVLEILRANKLYAKFSKCEFWLKQVSFLGHVVSNAGVSVDPAKIEAVTSWLRP
Query: STISEVRSILGLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVL
T+ + + LG+ YYRRF+ N S+I + + W++ + + LK L +PVL
Subjt: STISEVRSILGLTGYYRRFVENFSRITTSLTQLTRKGASFVWSKACEDSFQNLKQKLVIAPVL
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