; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0068951 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0068951
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase
Genome locationCMiso1.1chr03:13501915..13502796
RNA-Seq ExpressionCmc03g0068951
SyntenyCmc03g0068951
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003729 - mRNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038926.1 integrase [Cucumis melo var. makuwa]5.7e-16397.61Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS
        MK EFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKF MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF VSMLS
Subjt:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS

Query:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW
        RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQ VVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW

Query:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV
        LRWMLKELKC QKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKF GKLGVAQV
Subjt:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV

KAA0048003.1 integrase [Cucumis melo var. makuwa]5.7e-16397.61Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS
        MK EFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKF MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF VSMLS
Subjt:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS

Query:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW
        RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQ VVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW

Query:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV
        LRWMLKELKC QKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKF GKLGVAQV
Subjt:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV

KAA0057291.1 integrase [Cucumis melo var. makuwa]5.7e-16397.61Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS
        MK EFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKF MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF VSMLS
Subjt:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS

Query:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW
        RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQ VVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW

Query:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV
        LRWMLKELKC QKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKF GKLGVAQV
Subjt:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV

KAA0060377.1 integrase [Cucumis melo var. makuwa]5.7e-16397.61Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS
        MK EFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKF MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF VSMLS
Subjt:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS

Query:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW
        RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQ VVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW

Query:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV
        LRWMLKELKC QKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKF GKLGVAQV
Subjt:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV

TYJ95504.1 integrase [Cucumis melo var. makuwa]5.7e-16397.61Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS
        MK EFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKF MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF VSMLS
Subjt:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS

Query:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW
        RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQ VVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW

Query:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV
        LRWMLKELKC QKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKF GKLGVAQV
Subjt:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV

TrEMBL top hitse value%identityAlignment
A0A5A7TWN2 Integrase2.8e-16397.61Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS
        MK EFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKF MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF VSMLS
Subjt:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS

Query:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW
        RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQ VVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW

Query:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV
        LRWMLKELKC QKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKF GKLGVAQV
Subjt:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV

A0A5A7UDP7 Integrase2.8e-16397.61Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS
        MK EFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKF MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF VSMLS
Subjt:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS

Query:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW
        RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQ VVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW

Query:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV
        LRWMLKELKC QKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKF GKLGVAQV
Subjt:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV

A0A5D3CLV1 Integrase2.8e-16397.61Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS
        MK EFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKF MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF VSMLS
Subjt:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS

Query:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW
        RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQ VVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW

Query:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV
        LRWMLKELKC QKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKF GKLGVAQV
Subjt:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV

A0A5D3D538 Integrase2.8e-16397.61Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS
        MK EFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKF MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF VSMLS
Subjt:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS

Query:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW
        RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQ VVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW

Query:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV
        LRWMLKELKC QKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKF GKLGVAQV
Subjt:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV

A0A5D3E3T2 Integrase2.8e-16397.61Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS
        MK EFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKF MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILF VSMLS
Subjt:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS

Query:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW
        RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQ VVALSTTEAEYISLAAAGCQALW
Subjt:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW

Query:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV
        LRWMLKELKC QKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKF GKLGVAQV
Subjt:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.3e-5339.26Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDA--NLKLCKDDIGEAVDPSLYRSLVGSLMY-LTATRPDILFVVS
        + ++F M+D+  I +F+GI +   E +I +SQ  Y   +L KF MEN +  +TP+ +  N +L   D  +   P   RSL+G LMY +  TRPD+   V+
Subjt:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDA--NLKLCKDDIGEAVDPSLYRSLVGSLMY-LTATRPDILFVVS

Query:  MLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKK--VSESVLFGFCDSDWGGNVDDHKSTSGYVFSM-GSGVFSWTSKKQYVVALSTTEAEYISLAAA
        +LSR+ +      W+  KRVLRY+ GTI+  + +KK    E+ + G+ DSDW G+  D KST+GY+F M    +  W +K+Q  VA S+TEAEY++L  A
Subjt:  MLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKK--VSESVLFGFCDSDWGGNVDDHKSTSGYVFSM-GSGVFSWTSKKQYVVALSTTEAEYISLAAA

Query:  GCQALWLRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQ
          +ALWL+++L  +    +    ++ DN   I+++ NP  H R+KHI IKYHF R+ V++  + ++Y  T++Q+ADIFTK L    FV+   KLG+ Q
Subjt:  GCQALWLRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQ

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.8e-5641.44Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEV--NQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPS------LYRSLVGSLMY-LTATRPD
        + K F+M D+G     LG+++   +   ++ +SQ+KY   +L++F M+NA P +TP+  +LKL K      V+         Y S VGSLMY +  TRPD
Subjt:  MKKEFEMSDMGLIHYFLGIEV--NQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPS------LYRSLVGSLMY-LTATRPD

Query:  ILFVVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISL
        I   V ++SRF+ NP + HWEA K +LRY+ GT    + +   S+ +L G+ D+D  G++D+ KS++GY+F+   G  SW SK Q  VALSTTEAEYI+ 
Subjt:  ILFVVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISL

Query:  AAAGCQALWLRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKAL---KFDL
           G + +WL+  L+EL   QK E V++CD+ SAI LSKN ++H R+KHI ++YH+IR++V D  + V    T +  AD+ TK +   KF+L
Subjt:  AAAGCQALWLRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKAL---KFDL

P92519 Uncharacterized mitochondrial protein AtMg008101.9e-3638.5Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS
        +   F M D+G +HYFLGI++  +   + +SQ KYA  +L    M +  P +TP+   L        +  DPS +RS+VG+L YLT TRPDI + V+++ 
Subjt:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS

Query:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW
        + M  P  + ++  KRVLRY+ GTI  G+Y  K S+  +  FCDSDW G     +ST+G+   +G  + SW++K+Q  V+ S+TE EY +LA    +  W
Subjt:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.8e-6143.34Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS
        + + F + D   +HYFLGIE  +    + +SQ++Y  DLL +  M  A P  TPM  + KL      +  DP+ YR +VGSL YL  TRPDI + V+ LS
Subjt:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS

Query:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW
        +FM  P   H +A KR+LRY+ GT N GI+ KK +   L  + D+DW G+ DD+ ST+GY+  +G    SW+SKKQ  V  S+TEAEY S+A    +  W
Subjt:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW

Query:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV
        +  +L EL        V++CDN  A  L  NPVFH R KHI I YHFIR+ V+ G + V +  T DQ+AD  TK L    F  F  K+GV +V
Subjt:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE24.2e-6042.32Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS
        + + F + +   +HYFLGIE  +    + +SQ++Y  DLL +  M  A P  TPM  + KL      +  DP+ YR +VGSL YL  TRPD+ + V+ LS
Subjt:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS

Query:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW
        ++M  P   HW A KRVLRY+ GT + GI+ KK +   L  + D+DW G+ DD+ ST+GY+  +G    SW+SKKQ  V  S+TEAEY S+A    +  W
Subjt:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW

Query:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV
        +  +L EL        V++CDN  A  L  NPVFH R KHI + YHFIR+ V+ G + V +  T DQ+AD  TK L    F  F  K+GV +V
Subjt:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.3e-4839.6Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS
        +K  F++ D+G + YFLG+E+ ++   I I Q+KYA DLL +  +    P + PMD ++       G+ VD   YR L+G LMYL  TR DI F V+ LS
Subjt:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS

Query:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW
        +F   P+ +H +A  ++L YI GT+  G++Y   +E  L  F D+ +    D  +ST+GY   +G+ + SW SKKQ VV+ S+ EAEY +L+ A  + +W
Subjt:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW

Query:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRD
        L    +EL+      T+LFCDN +AI ++ N VFH R+KHI    H +R+
Subjt:  LRWMLKELKCTQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRD

ATMG00240.1 Gag-Pol-related retrotransposon family protein9.8e-1239.74Show/hide
Query:  MYLTATRPDILFVVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGY
        MYLT TRPD+ F V+ LS+F +  + +  +A  +VL Y+ GT+  G++Y   S+  L  F DSDW    D  +S +G+
Subjt:  MYLTATRPDILFVVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGY

ATMG00810.1 DNA/RNA polymerases superfamily protein1.4e-3738.5Show/hide
Query:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS
        +   F M D+G +HYFLGI++  +   + +SQ KYA  +L    M +  P +TP+   L        +  DPS +RS+VG+L YLT TRPDI + V+++ 
Subjt:  MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLS

Query:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW
        + M  P  + ++  KRVLRY+ GTI  G+Y  K S+  +  FCDSDW G     +ST+G+   +G  + SW++K+Q  V+ S+TE EY +LA    +  W
Subjt:  RFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAGGAATTCGAGATGAGTGATATGGGTCTCATCCACTACTTTCTCGGAATTGAAGTTAATCAAAATGAAGGAGAAATTGTCATTTCACAACAAAAGTAT
GCTCATGATTTACTAAAAAAATTTTGGATGGAAAATGCTTCACCTTGCAACACTCCCATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTC
GATCCAAGTTTATATCGAAGCTTAGTTGGAAGCTTAATGTATTTGACAGCAACAAGACCTGATATTTTATTTGTTGTAAGTATGTTAAGCAGATTTATGACAAAC
CCGAAAAGAAGTCATTGGGAAGCAGGTAAAAGAGTTCTTCGTTACATTCTTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGTTGTTT
GGTTTTTGTGATAGTGACTGGGGTGGTAATGTGGATGATCATAAAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCGAAGAAA
CAATATGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTTAGCTGCAGCTGGATGTCAAGCTTTATGGCTTCGGTGGATGTTAAAAGAATTGAAGTGT
ACTCAAAAATGTGAAACTGTTTTATTTTGTGATAATGGATCTGCCATAGCATTATCAAAGAATCCAGTTTTCCATGGAAGAAGCAAGCATATTCGAATCAAATAT
CATTTTATCAGAGACTTGGTTAAAGATGGAGAAGTGATAGTAAAATATTGCAAGACTCAAGATCAAGTGGCTGATATTTTTACAAAGGCGCTCAAGTTTGACTTA
TTTGTTAAATTCGGAGGAAAACTTGGAGTTGCTCAAGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAGGAATTCGAGATGAGTGATATGGGTCTCATCCACTACTTTCTCGGAATTGAAGTTAATCAAAATGAAGGAGAAATTGTCATTTCACAACAAAAGTAT
GCTCATGATTTACTAAAAAAATTTTGGATGGAAAATGCTTCACCTTGCAACACTCCCATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTC
GATCCAAGTTTATATCGAAGCTTAGTTGGAAGCTTAATGTATTTGACAGCAACAAGACCTGATATTTTATTTGTTGTAAGTATGTTAAGCAGATTTATGACAAAC
CCGAAAAGAAGTCATTGGGAAGCAGGTAAAAGAGTTCTTCGTTACATTCTTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGTTGTTT
GGTTTTTGTGATAGTGACTGGGGTGGTAATGTGGATGATCATAAAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCGAAGAAA
CAATATGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTTAGCTGCAGCTGGATGTCAAGCTTTATGGCTTCGGTGGATGTTAAAAGAATTGAAGTGT
ACTCAAAAATGTGAAACTGTTTTATTTTGTGATAATGGATCTGCCATAGCATTATCAAAGAATCCAGTTTTCCATGGAAGAAGCAAGCATATTCGAATCAAATAT
CATTTTATCAGAGACTTGGTTAAAGATGGAGAAGTGATAGTAAAATATTGCAAGACTCAAGATCAAGTGGCTGATATTTTTACAAAGGCGCTCAAGTTTGACTTA
TTTGTTAAATTCGGAGGAAAACTTGGAGTTGCTCAAGTCTAG
Protein sequenceShow/hide protein sequence
MKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFWMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFVVSMLSRFMTN
PKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQYVVALSTTEAEYISLAAAGCQALWLRWMLKELKC
TQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFGGKLGVAQV