| GenBank top hits | e value | %identity | Alignment |
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 2.8e-67 | 89.29 | Show/hide |
Query: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
MNDVDKDQW+KAMDLE+ESMYFN VWE VDLP+G+KPIG KWIYK+KRDSAGKVQ FKARLVAKGYTQR+GVDYEE FSP+ MLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
Query: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
IWQ+DVKTAFLNGNLEESIF+SQPEGFITQGQEQKVCKLN
Subjt: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 2.8e-67 | 89.29 | Show/hide |
Query: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
MNDVDKDQW+KAMDLE+ESMYFN VWE VDLP+G+KPIG KWIYK+KRDSAGKVQ FKARLVAKGYTQR+GVDYEE FSP+ MLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
Query: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
IWQ+DVKTAFLNGNLEESIF+SQPEGFITQGQEQKVCKLN
Subjt: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
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| KAA0063959.1 gag/pol protein [Cucumis melo var. makuwa] | 1.6e-70 | 98.55 | Show/hide |
Query: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
Query: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCK
IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQK K
Subjt: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCK
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| TYK06361.1 gag/pol protein [Cucumis melo var. makuwa] | 8.2e-67 | 88.57 | Show/hide |
Query: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
MNDVDKDQW+KAMDLE+ESMYFN VWE VDLP+G+KPIG KWIYK+KRDSAGKVQ FKARLVAKGYTQR+GVDY+E FSP+ MLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
Query: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
IWQ+DVKTAFLNGNLEESIF+SQPEGFITQGQEQKVCKLN
Subjt: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 2.8e-67 | 89.29 | Show/hide |
Query: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
MNDVDKDQW+KAMDLE+ESMYFN VWE VDLP+G+KPIG KWIYK+KRDSAGKVQ FKARLVAKGYTQR+GVDYEE FSP+ MLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
Query: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
IWQ+DVKTAFLNGNLEESIF+SQPEGFITQGQEQKVCKLN
Subjt: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZD0 Gag/pol protein | 1.4e-67 | 89.29 | Show/hide |
Query: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
MNDVDKDQW+KAMDLE+ESMYFN VWE VDLP+G+KPIG KWIYK+KRDSAGKVQ FKARLVAKGYTQR+GVDYEE FSP+ MLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
Query: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
IWQ+DVKTAFLNGNLEESIF+SQPEGFITQGQEQKVCKLN
Subjt: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
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| A0A5A7UYE8 Gag/pol protein | 1.4e-67 | 89.29 | Show/hide |
Query: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
MNDVDKDQW+KAMDLE+ESMYFN VWE VDLP+G+KPIG KWIYK+KRDSAGKVQ FKARLVAKGYTQR+GVDYEE FSP+ MLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
Query: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
IWQ+DVKTAFLNGNLEESIF+SQPEGFITQGQEQKVCKLN
Subjt: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
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| A0A5D3C1D1 Gag/pol protein | 7.7e-71 | 98.55 | Show/hide |
Query: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
Query: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCK
IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQK K
Subjt: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCK
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| A0A5D3C378 Gag/pol protein | 4.0e-67 | 88.57 | Show/hide |
Query: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
MNDVDKDQW+KAMDLE+ESMYFN VWE VDLP+G+KPIG KWIYK+KRDSAGKVQ FKARLVAKGYTQR+GVDY+E FSP+ MLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
Query: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
IWQ+DVKTAFLNGNLEESIF+SQPEGFITQGQEQKVCKLN
Subjt: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
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| A0A5D3CYF4 Gag/pol protein | 1.4e-67 | 89.29 | Show/hide |
Query: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
MNDVDKDQW+KAMDLE+ESMYFN VWE VDLP+G+KPIG KWIYK+KRDSAGKVQ FKARLVAKGYTQR+GVDYEE FSP+ MLKSIRILLSIATFYDYE
Subjt: MNDVDKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYE
Query: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
IWQ+DVKTAFLNGNLEESIF+SQPEGFITQGQEQKVCKLN
Subjt: IWQIDVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.5e-23 | 38.24 | Show/hide |
Query: DKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYEIWQI
DK W +A++ EL + N W P+ + +W++ K + G +KARLVA+G+TQ+ +DYEE F+P+ + S R +LS+ Y+ ++ Q+
Subjt: DKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYEIWQI
Query: DVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
DVKTAFLNG L+E I++ P+G VCKLN
Subjt: DVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.9e-35 | 50.74 | Show/hide |
Query: DKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYEIWQI
+K+Q +KAM E+ES+ N ++ V+LPKG +P+ KW++K K+D K+ +KARLV KG+ Q++G+D++EIFSP+V + SIR +LS+A D E+ Q+
Subjt: DKDQWIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYEIWQI
Query: DVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
DVKTAFL+G+LEE I++ QPEGF G++ VCKLN
Subjt: DVKTAFLNGNLEESIFISQPEGFITQGQEQKVCKLN
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 6.0e-12 | 39.53 | Show/hide |
Query: WIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIA
W +AM EL+++ N W V P +G KW++K K S G + KARLVAKG+ Q +G+ + E +SP+V +IR +L++A
Subjt: WIKAMDLELESMYFNLVWEFVDLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.3e-26 | 43.28 | Show/hide |
Query: DQWIKAMDLELESMYFNLVWEFVDLPKG-IKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYEIWQID
++W AM E+ + N W+ V P + +G +WI+ KK +S G + +KARLVAKGY QR G+DY E FSP++ SIRI+L +A + I Q+D
Subjt: DQWIKAMDLELESMYFNLVWEFVDLPKG-IKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYEIWQID
Query: VKTAFLNGNLEESIFISQPEGFITQGQEQKVCKL
V AFL G L + +++SQP GFI + + VCKL
Subjt: VKTAFLNGNLEESIFISQPEGFITQGQEQKVCKL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.3e-26 | 42.54 | Show/hide |
Query: DQWIKAMDLELESMYFNLVWEFV-DLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYEIWQID
D+W +AM E+ + N W+ V P + +G +WI+ KK +S G + +KARLVAKGY QR G+DY E FSP++ SIRI+L +A + I Q+D
Subjt: DQWIKAMDLELESMYFNLVWEFV-DLPKGIKPIGYKWIYKKKRDSAGKVQAFKARLVAKGYTQRQGVDYEEIFSPIVMLKSIRILLSIATFYDYEIWQID
Query: VKTAFLNGNLEESIFISQPEGFITQGQEQKVCKL
V AFL G L + +++SQP GF+ + + VC+L
Subjt: VKTAFLNGNLEESIFISQPEGFITQGQEQKVCKL
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