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Cmc03g0069231 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0069231
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotransposon protein
Genome locationCMiso1.1chr03:14002276..14007794
RNA-Seq ExpressionCmc03g0069231
SyntenyCmc03g0069231
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036124.1 retrotransposon protein [Cucumis melo var. makuwa]3.3e-0776.92Show/hide
Query:  GWRSDKGTYRPSYLAQLIRMLRERMLDCGLTTTVIESRI
        GWRSD GT+R  YLAQL+RML ERM+ C LTTTVIESRI
Subjt:  GWRSDKGTYRPSYLAQLIRMLRERMLDCGLTTTVIESRI
KAA0051365.1 retrotransposon protein [Cucumis melo var. makuwa]4.1e-0550.88Show/hide
Query:  GRGGMPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCGL-TTTVIESRI
        G GG   R+  G+G +GGW+SD  T+RP YLAQL+RM+ E++  C +  TTVI+ RI
Subjt:  GRGGMPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCGL-TTTVIESRI
KAA0062170.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-0544.59Show/hide
Query:  GSCITGTQSSPST----GRGGMPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCGL-TTTVIESRI
        GS        P T    G GG    +  G+G +GGW+ D GT+RP YLAQL+RM+ E++  C + TTTVI+ RI
Subjt:  GSCITGTQSSPST----GRGGMPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCGL-TTTVIESRI
KAA0063919.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-15100Show/hide
Query:  MPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCG
        MPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCG
Subjt:  MPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCG
XP_031742024.1 uncharacterized protein LOC105435527 [Cucumis sativus]1.1e-0575Show/hide
Query:  GWRSDKGTYRPSYLAQLIRMLRERMLDCGLT-TTVIESRI
        GWRSD  T+RPSYLAQL+RML ERM  C LT TTV+ESRI
Subjt:  GWRSDKGTYRPSYLAQLIRMLRERMLDCGLT-TTVIESRI
TrEMBL top hitse value%identityAlignment
A0A5A7SXR1 Retrotransposon protein1.6e-0776.92Show/hide
Query:  GWRSDKGTYRPSYLAQLIRMLRERMLDCGLTTTVIESRI
        GWRSD GT+R  YLAQL+RML ERM+ C LTTTVIESRI
Subjt:  GWRSDKGTYRPSYLAQLIRMLRERMLDCGLTTTVIESRI
A0A5A7UCJ1 Retrotransposon protein2.0e-0550.88Show/hide
Query:  GRGGMPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCGL-TTTVIESRI
        G GG   R+  G+G +GGW+SD  T+RP YLAQL+RM+ E++  C +  TTVI+ RI
Subjt:  GRGGMPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCGL-TTTVIESRI
A0A5A7V4E7 Retrotransposon protein6.8e-0644.59Show/hide
Query:  GSCITGTQSSPST----GRGGMPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCGL-TTTVIESRI
        GS        P T    G GG    +  G+G +GGW+ D GT+RP YLAQL+RM+ E++  C + TTTVI+ RI
Subjt:  GSCITGTQSSPST----GRGGMPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCGL-TTTVIESRI
A0A5D3BQ46 Retrotransposon protein2.6e-0549.12Show/hide
Query:  GRGGMPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCGL-TTTVIESRI
        G GG    +  G+G +GGW+SD GT+ P YLAQL+ M+ E++L C +  TTVI  RI
Subjt:  GRGGMPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCGL-TTTVIESRI
A0A5D3CHE3 Retrotransposon protein5.6e-16100Show/hide
Query:  MPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCG
        MPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCG
Subjt:  MPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAAGATATGGGTGACTAAACACACGCAACTACTAGTGGTGACGACATCACAAACATTGAGGCCTCAAACAAATGGACTCAATGGCGGGATGCACTTGCTTCATCG
ATGTTCAACGAATGGCAGTTGTATAACGGGAACCCAAAGCAGTCCTAGCACAGGTAGAGGAGGCATGCCTAGTAGACTACCTCGTGGACTTGGTGAACACGGGGGGTGGA
GGTCGGACAAAGGGACCTACCGCCCGAGTTATTTAGCACAACTGATTAGGATGTTAAGAGAAAGAATGCTCGATTGCGGTTTGACAACCACCGTCATCGAAAGTCGAATA
TAA
mRNA sequenceShow/hide mRNA sequence
TCTTATTCCTTTCCGCGTTTGGCAATAGAAAAAATTGGGGAAAGGAAAATTTATTTTCCCCCATTTTCCCTTCTTAATCCCTCCACCTAACCCTTCTCTCTCATCTTTAT
TCCCTTCTTTGTTCCTTCTCTTTCCTAACACCTACTCTTCATCTTCCTTCTTCTCCTCTCCCCTCATTAGAACCCTTCCTCTGTCGGCCACCATTTGATCCCTCTTCACG
TTCATTCCTTCTCCCTTTTCAACCGTTTTTCTTACCATATTTTGTTTTTCCATTTTTTTCGTCTCGTTAATCACCAATTTCTCCACTAGGTTTCATTTGGCAGCCAATGT
ACTATCACTGTTTGCTTCTAAACCCATTTGGTCGTCGATCAATCTCCTTGTTTAAACCTCTATTCGACCATGAACTTGGAAAGGGTACATATTCCTTGAATTTTTTTTGT
TTCTCTTTTGATTCGTTCATGGCTTATCTATTTAGTTTGCCACTCGGATCTATTACGCATCCTTCGTCTAACACCTTGCCACTCGAATCTATTACGATGAGTTGTGGCCT
TGGCGGATTCAATTCGAACATGGTAGGGTATTGAGTGCACGCGAGTACGTAGCGAGATATATCTTGAGGTACTAAGGTTCCCACTTCATATTAGGTGGAAAATAGACCCA
CAAGAAATCATCGATGTGGTATATGCCTTCATAATCACCTAACGACATATGCTCTTGATATTAGAAGCACTGTTGAATGACCACAAGCGGATAACTCACGTACCAGCCAA
CGCAAGACATAGGATTAGGGACCTAGCCTACTTTCGCATGATACATACGTCTGACCTTGTGTATCGGTAAAGTACACAGATGGACAGACGTTGTTTTGTAATCTTTTGCC
ATTTACTACGAACAAGAGTTGGCCTAGAGTCGATGGAACTCGTTGACATTAAGGAGATGGTCGCCATCTTCCTTCATGTGTTGATGCACGATGTGAAAAACTGACAGATT
CAAAGGGAGTTTATAAGGTCTGGTGAGACAGTTTCTCGACATTCCAACATTGTCTTGATGGTTGTTCTTCATCTGCATGACGAGTTATTGGCCACACCACAGCCTATAAC
GAGTACATGCATAGATTTGAGGTGGTGGTCTTTCGAGAATTTTCTAAGGGCATTAGACGACAGGTACATCAAAGTTAACGTGTCTGCAGCTGATTCATTAAGATATCGAA
CATGAAAGGACGAAGCGACAATGAATGTCCTCGGCGTATACGATACGAAGGAGGACTTCATTTTCGTCTTAGCCGGCTAGGAAGGATCTACAGTAGACTCACGTGTCCTA
CGACATGTAATTTCCAGACCTAACGATCTGAAGGTTCCAAAGGATGAGATCGGTTTTACTACCTGTGCGACACGGGATACCCAATGCAGAAAGTTTTCTAACACCGTATA
GGGGGTAACATTATCATCTACAGAAGTGGCATGGTGTTGGGAATGCTCCAACAACACTGAAGGAGTTCTTCAACATGAAACATTCTTCTGCATAGAATGTGATTGAAAGA
GCGCTAAGCCTGTTGAAGGGACGTTGGGCAATACTATGTGAAAAATCCCACTACTCGGTTCAAGTCCAATGTCGGACTATTATGACTTGTTGTTTCCTCCATAATTTAAT
AAATCGTAAGATGACGAACTCCGACATATTGGATGACGAAGATATGGGTGACTAAACACACGCAACTACTAGTGGTGACGACATCACAAACATTGAGGCCTCAAACAAAT
GGACTCAATGGCGGGATGCACTTGCTTCATCGATGTTCAACGAATGGCAGTTGTATAACGGGAACCCAAAGCAGTCCTAGCACAGGTAGAGGAGGCATGCCTAGTAGACT
ACCTCGTGGACTTGGTGAACACGGGGGGTGGAGGTCGGACAAAGGGACCTACCGCCCGAGTTATTTAGCACAACTGATTAGGATGTTAAGAGAAAGAATGCTCGATTGCG
GTTTGACAACCACCGTCATCGAAAGTCGAATATAACTGTTGAAAAAGATGTTTCAGGCCATTACCAAGATAAGGGGCCTAGCAGGCAGTGGCTTCGGCTGGAATGATGAC
GTCAAGTGCATCATCGCCGAGAGAGACGTGTTAGACAATTGGATCCGGACACATCCTGTAGCAAAAGGACTCCTGAACAAGCCCTTCCTACATTACGACAAGTTATCATA
CGTGTTTGAGAAAAGACCCTGCAACGAGGGCCCGTGTGGAGACGTTCACAGACATCGGGTCTAATGTGCCAGGACTGCTCCCCGTGGAGGATGGCCTGGAGACGGAGTTC
CTGGCTATGTGCAACCCGAGGATGAACATGGTACCGAATGACATCATGGTCGATCGATCTGGTCAGTCGAGCGACGCTAGGCCAGGCTCTAGCAATCAGGAAAGGAAGGG
TGACATGCAGCCATTTGAGAGTGACGACCTGATTCGGGATTGCATGGGCACTGCGAATGATTAGCTTAAGACCATTGCAGAATGGCCTAATAAAGCTATCAACTGGAAAG
ACGCAATGGTATTGGAGGTTATTACGTATATGGAGACTCTCCCGGGCCTTAGTATTGAGGACATCAGTAAATGAGTGATGATAGTAACGGAAAAGGTGTCGCTAACGAGA
AGCTTCATCAGGATGCCCTATTCGATGAAGGTCGCTTACTGTAAGGTCCTCCTCTGTGCAAGACGTTTATTCTTTTTCTCTTTGTCGGAATAATGTATTTGTTTTACTTA
TTTGCTTGACCATTTTCTATGTTGTAATGGACGTTAACTATTTATGACAGTTTCTTTCTCGATGTTACATGAAACGTAAAAAATTAATTTATGCACATGTCGCCTAACAC
ATGATACTA
Protein sequenceShow/hide protein sequence
MTKIWVTKHTQLLVVTTSQTLRPQTNGLNGGMHLLHRCSTNGSCITGTQSSPSTGRGGMPSRLPRGLGEHGGWRSDKGTYRPSYLAQLIRMLRERMLDCGLTTTVIESRI