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Cmc03g0069251 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0069251
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionDEAD-box ATP-dependent RNA helicase 32
Genome locationCMiso1.1chr03:14053303..14054287
RNA-Seq ExpressionCmc03g0069251
SyntenyCmc03g0069251
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033961.1 DEAD-box ATP-dependent RNA helicase 32 [Cucumis melo var. makuwa]2.2e-1352Show/hide
Query:  MIRIKLIGEFLLSTREYLVWLKSP------------------------------------------GEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF
        MIRIKLIGEFLLSTREYLVWLKSP                                          GEGKGRGK+A  REG VTCH+ TQFCFRVYVSVF
Subjt:  MIRIKLIGEFLLSTREYLVWLKSP------------------------------------------GEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF

KAA0045385.1 hypothetical protein E6C27_scaffold442G00010 [Cucumis melo var. makuwa]5.9e-1163.64Show/hide
Query:  IKLIGEFLLSTREYLVWLKSPGEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF
        I +I       R  +V +  PGEGKGRGK+ASD+EGSVTCH+GTQFCFRVYV+VF
Subjt:  IKLIGEFLLSTREYLVWLKSPGEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF

KAA0051087.1 transposase [Cucumis melo var. makuwa]2.0e-1144.04Show/hide
Query:  IKLIGEFLLSTREYLVWLKS-------------------------------------------------PG-----EGKGRGKMASDREGSVTCHIGTQF
        IKLIGEFLLS REY VWLKS                                                 PG     EGKGRGK+ASD+EGSVTCH+GTQF
Subjt:  IKLIGEFLLSTREYLVWLKS-------------------------------------------------PG-----EGKGRGKMASDREGSVTCHIGTQF

Query:  CFRVYVSVF
        C+R YVSVF
Subjt:  CFRVYVSVF

KAA0063966.1 hypothetical protein E6C27_scaffold616G001210 [Cucumis melo var. makuwa]3.8e-1080.49Show/hide
Query:  LVWLKSPGEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF
        +V +   GEGKGRGK+ASDREGSVTCH+GTQFCFRVYVSVF
Subjt:  LVWLKSPGEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF

TYJ98810.1 hypothetical protein E5676_scaffold703G00090 [Cucumis melo var. makuwa]6.5e-1094.12Show/hide
Query:  GEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF
        GEGKGRGK+ASDREGSVTCH+GTQFCFRVYVSVF
Subjt:  GEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF

TrEMBL top hitse value%identityAlignment
A0A5A7SWX3 DEAD-box ATP-dependent RNA helicase 321.0e-1352Show/hide
Query:  MIRIKLIGEFLLSTREYLVWLKSP------------------------------------------GEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF
        MIRIKLIGEFLLSTREYLVWLKSP                                          GEGKGRGK+A  REG VTCH+ TQFCFRVYVSVF
Subjt:  MIRIKLIGEFLLSTREYLVWLKSP------------------------------------------GEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF

A0A5A7TVG7 Uncharacterized protein2.8e-1163.64Show/hide
Query:  IKLIGEFLLSTREYLVWLKSPGEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF
        I +I       R  +V +  PGEGKGRGK+ASD+EGSVTCH+GTQFCFRVYV+VF
Subjt:  IKLIGEFLLSTREYLVWLKSPGEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF

A0A5A7VC05 Uncharacterized protein1.8e-1080.49Show/hide
Query:  LVWLKSPGEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF
        +V +   GEGKGRGK+ASDREGSVTCH+GTQFCFRVYVSVF
Subjt:  LVWLKSPGEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF

A0A5A7VJ46 Uncharacterized protein3.1e-1094.12Show/hide
Query:  GEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF
        GEGKGRGK+ASDREGSVTCH+GTQFCFRVYVSVF
Subjt:  GEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF

A0A5D3CKP0 Transposase9.8e-1244.04Show/hide
Query:  IKLIGEFLLSTREYLVWLKS-------------------------------------------------PG-----EGKGRGKMASDREGSVTCHIGTQF
        IKLIGEFLLS REY VWLKS                                                 PG     EGKGRGK+ASD+EGSVTCH+GTQF
Subjt:  IKLIGEFLLSTREYLVWLKS-------------------------------------------------PG-----EGKGRGKMASDREGSVTCHIGTQF

Query:  CFRVYVSVF
        C+R YVSVF
Subjt:  CFRVYVSVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGGATCAAGTTAATTGGAGAATTTTTACTGTCAACTAGGGAGTACCTTGTTTGGCTAAAATCTCCAGGCGAAGGTAAAGGTAGAGGAAAGATGGCGAGCGACAG
AGAAGGATCCGTGACATGCCATATAGGGACTCAATTTTGCTTCCGCGTTTATGTATCAGTGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTAGGATCAAGTTAATTGGAGAATTTTTACTGTCAACTAGGGAGTACCTTGTTTGGCTAAAATCTCCAGGCGAAGGTAAAGGTAGAGGAAAGATGGCGAGCGACAG
AGAAGGATCCGTGACATGCCATATAGGGACTCAATTTTGCTTCCGCGTTTATGTATCAGTGTTTTAGTATTCCGTTTTCAATGAAAATTTAGTCTTCCCTCGTTTCAAAA
AGTTTCTCTTGTC
Protein sequenceShow/hide protein sequence
MIRIKLIGEFLLSTREYLVWLKSPGEGKGRGKMASDREGSVTCHIGTQFCFRVYVSVF